A Cellular Potts Model simulating cell migration on and in matrix environments.
暂无分享,去创建一个
[1] Luigi Preziosi,et al. Multiscale Developments of the Cellular Potts Model , 2012, Multiscale Model. Simul..
[2] P. Friedl,et al. Extracellular matrix determinants of proteolytic and non-proteolytic cell migration. , 2011, Trends in cell biology.
[3] Marco Scianna,et al. A Multiscale Hybrid Model for Pro-angiogenic Calcium Signals in a Vascular Endothelial Cell , 2011, Bulletin of Mathematical Biology.
[4] Paolo P. Provenzano,et al. Aligned collagen is a prognostic signature for survival in human breast carcinoma. , 2011, The American journal of pathology.
[5] Jan Lammerding,et al. Nuclear mechanics during cell migration. , 2011, Current opinion in cell biology.
[6] Marcella Trombetta,et al. A G-CSF functionalized PLLA scaffold for wound repair: An in vitro preliminary study , 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology.
[7] J. Jansen,et al. The influence of nanoscale topographical cues on initial osteoblast morphology and migration. , 2010, European cells & materials.
[8] D. Oral,et al. Collagen cross-linking. , 2010, Ophthalmology.
[9] Claudio G. Rolli,et al. Impact of Tumor Cell Cytoskeleton Organization on Invasiveness and Migration: A Microchannel-Based Approach , 2010, PloS one.
[10] P. Friedl,et al. Interstitial cell migration: integrin-dependent and alternative adhesion mechanisms , 2009, Cell and Tissue Research.
[11] Jacco van Rheenen,et al. Collagen-based cell migration models in vitro and in vivo. , 2009, Seminars in cell & developmental biology.
[12] Olga Ilina,et al. Mechanisms of collective cell migration at a glance , 2009, Journal of Cell Science.
[13] P. Friedl,et al. Collective cell migration in morphogenesis, regeneration and cancer , 2009, Nature Reviews Molecular Cell Biology.
[14] Sanjay Kumar,et al. The mechanical rigidity of the extracellular matrix regulates the structure, motility, and proliferation of glioma cells. , 2009, Cancer research.
[15] Stephen J. Weiss,et al. Protease-dependent versus -independent cancer cell invasion programs: three-dimensional amoeboid movement revisited , 2009, The Journal of cell biology.
[16] Kenneth M. Yamada,et al. One-dimensional topography underlies three-dimensional fibrillar cell migration , 2009, The Journal of cell biology.
[17] L. Kaufman,et al. Rheology and confocal reflectance microscopy as probes of mechanical properties and structure during collagen and collagen/hyaluronan self-assembly. , 2009, Biophysical journal.
[18] Brenda M Rubenstein,et al. The role of extracellular matrix in glioma invasion: a cellular Potts model approach. , 2008, Biophysical journal.
[19] Nicholas S. Flann,et al. Discovering novel cancer therapies: A computational modeling and search approach , 2008, 2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology.
[20] Douglas A Lauffenburger,et al. Microarchitecture of three-dimensional scaffolds influences cell migration behavior via junction interactions. , 2008, Biophysical journal.
[21] Peter Friedl,et al. Interstitial leukocyte migration and immune function , 2008, Nature Immunology.
[22] Christopher Beadle,et al. The role of myosin II in glioma invasion of the brain. , 2008, Molecular biology of the cell.
[23] J. Jansen,et al. Toward guided tissue and bone regeneration: morphology, attachment, proliferation, and migration of cells cultured on collagen barrier membranes. A systematic review , 2008, Odontology.
[24] Benjamin Geiger,et al. Induction of cell polarization and migration by a gradient of nanoscale variations in adhesive ligand spacing. , 2008, Nano letters.
[25] A. Kashina,et al. Cell biology of embryonic migration. , 2008, Birth defects research. Part C, Embryo today : reviews.
[26] Erica D. Perryn,et al. Vascular sprout formation entails tissue deformations and VE-cadherin-dependent cell-autonomous motility. , 2008, Developmental biology.
[27] Erik Sahai,et al. Illuminating the metastatic process , 2007, Nature Reviews Cancer.
[28] M. Stack,et al. Multi-step pericellular proteolysis controls the transition from individual to collective cancer cell invasion , 2007, Nature Cell Biology.
[29] D. Stupack. The biology of integrins. , 2007, Oncology.
[30] Yi Jiang,et al. A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis. , 2007, Biophysical journal.
[31] Benjamin Geiger,et al. Cell spreading and focal adhesion dynamics are regulated by spacing of integrin ligands. , 2007, Biophysical journal.
[32] Steven C George,et al. Noninvasive assessment of collagen gel microstructure and mechanics using multiphoton microscopy. , 2007, Biophysical journal.
[33] Ronald N Germain,et al. Stromal cell networks regulate lymphocyte entry, migration, and territoriality in lymph nodes. , 2006, Immunity.
[34] Douglas A. Lauffenburger,et al. Understanding Effects of Matrix Protease and Matrix Organization on Directional Persistence and Translational Speed in Three-Dimensional Cell Migration , 2006, Annals of Biomedical Engineering.
[35] D. Lauffenburger,et al. Migration of tumor cells in 3D matrices is governed by matrix stiffness along with cell-matrix adhesion and proteolysis. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[36] J. Hubbell,et al. Molecularly engineered PEG hydrogels: a novel model system for proteolytically mediated cell migration. , 2005, Biophysical journal.
[37] Shelly R. Peyton,et al. Extracellular matrix rigidity governs smooth muscle cell motility in a biphasic fashion , 2005, Journal of cellular physiology.
[38] Roeland M. H. Merks,et al. Contact-Inhibited Chemotaxis in De Novo and Sprouting Blood-Vessel Growth , 2005, PLoS Comput. Biol..
[39] D. Vorp,et al. Crosslinking of collagen gels by transglutaminase. , 2004, Journal of biomedical materials research. Part A.
[40] Fergal J O'Brien,et al. Influence of freezing rate on pore structure in freeze-dried collagen-GAG scaffolds. , 2004, Biomaterials.
[41] M. Spector,et al. Optimal Degradation Rate for Collagen Chambers Used for Regeneration of Peripheral Nerves over Long Gaps , 2004, Cells Tissues Organs.
[42] Martin Bastmeyer,et al. Cell behaviour on micropatterned substrata: limits of extracellular matrix geometry for spreading and adhesion , 2004, Journal of Cell Science.
[43] G. Borisy,et al. Cell Migration: Integrating Signals from Front to Back , 2003, Science.
[44] J. Segall,et al. Intravital imaging of cell movement in tumours , 2003, Nature Reviews Cancer.
[45] Micah Dembo,et al. Influence of type I collagen surface density on fibroblast spreading, motility, and contractility. , 2003, Biophysical journal.
[46] George Oster,et al. Polymer Motors: Pushing out the Front and Pulling up the Back , 2003, Current Biology.
[47] R.M. Capito,et al. Scaffold-based articular cartilage repair , 2003, IEEE Engineering in Medicine and Biology Magazine.
[48] P. Friedl,et al. Tumour-cell invasion and migration: diversity and escape mechanisms , 2003, Nature Reviews Cancer.
[49] A. Metters,et al. Synthetic matrix metalloproteinase-sensitive hydrogels for the conduction of tissue regeneration: Engineering cell-invasion characteristics , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[50] A. Strongin,et al. Compensation mechanism in tumor cell migration , 2003, The Journal of cell biology.
[51] Amy Brock,et al. Geometric determinants of directional cell motility revealed using microcontact printing. , 2003, Langmuir : the ACS journal of surfaces and colloids.
[52] J. Paul Robinson,et al. Tensile mechanical properties of three-dimensional type I collagen extracellular matrices with varied microstructure. , 2002, Journal of biomechanical engineering.
[53] H O Ho,et al. Characterization of collagen gel solutions and collagen matrices for cell culture. , 2001, Biomaterials.
[54] R T Tranquillo,et al. Neuronal contact guidance in magnetically aligned fibrin gels: effect of variation in gel mechano-structural properties. , 2001, Biomaterials.
[55] J. P. Robinson,et al. Time-lapse confocal reflection microscopy of collagen fibrillogenesis and extracellular matrix assembly in vitro. , 2000, Biopolymers.
[56] P. Friedl,et al. The biology of cell locomotion within three-dimensional extracellular matrix , 2000, Cellular and Molecular Life Sciences CMLS.
[57] E. Bröcker,et al. Functional hierarchy of simultaneously expressed adhesion receptors: integrin alpha2beta1 but not CD44 mediates MV3 melanoma cell migration and matrix reorganization within three-dimensional hyaluronan-containing collagen matrices. , 1999, Molecular biology of the cell.
[58] K. Zänker,et al. CD4+ T lymphocytes migrating in three‐dimensional collagen lattices lack focal adhesions and utilize β1 integrin‐independent strategies for polarization, interaction with collagen fibers and locomotion , 1998, European journal of immunology.
[59] Sean P. Palecek,et al. Erratum: Integrin–ligand binding properties govern cell migration speed through cell–substratum adhesiveness , 1997, Nature.
[60] P. Friedl,et al. Migration of highly aggressive MV3 melanoma cells in 3-dimensional collagen lattices results in local matrix reorganization and shedding of alpha2 and beta1 integrins and CD44. , 1997, Cancer research.
[61] W. Saltzman,et al. Neutrophil motility in extracellular matrix gels: mesh size and adhesion affect speed of migration. , 1997, Biophysical journal.
[62] Sean P. Palecek,et al. Integrin-ligand binding properties govern cell migration speed through cell-substratum adhesiveness , 1997, Nature.
[63] D. Lauffenburger,et al. Cell Migration: A Physically Integrated Molecular Process , 1996, Cell.
[64] J. Trempe. Molecular biology of the cell, 3rd edition Bruce Alberts, Dennis Bray, Julian Lewis, Martin Raff, Keith Roberts and James D. Watson, Garland Publishing, 1994, 559.95 (xiii + 1294 pages), ISBN 0-815-31619-4 , 1995, Trends in Endocrinology & Metabolism.
[65] J. Feijen,et al. Glutaraldehyde as a crosslinking agent for collagen-based biomaterials , 1995 .
[66] Richard B. Dickinson,et al. Biased cell migration of fibroblasts exhibiting contact guidance in oriented collagen gels , 1994, Annals of Biomedical Engineering.
[67] Antonios G. Mikos,et al. Pore Morphology Effects on the Fibrovascular Tissue Growth in Porous Polymer Substrates , 1994, Cell transplantation.
[68] D. Lauffenburger,et al. Receptors: Models for Binding, Trafficking, and Signaling , 1993 .
[69] D A Lauffenburger,et al. Maximal migration of human smooth muscle cells on fibronectin and type IV collagen occurs at an intermediate attachment strength , 1993, The Journal of cell biology.
[70] Glazier,et al. Simulation of the differential adhesion driven rearrangement of biological cells. , 1993, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.
[71] Glazier,et al. Simulation of biological cell sorting using a two-dimensional extended Potts model. , 1992, Physical review letters.
[72] S. Goodman,et al. The E8 subfragment of laminin promotes locomotion of myoblasts over extracellular matrix , 1989, The Journal of cell biology.
[73] Edward Y Lee,et al. Synthesis and characterization of a model extracellular matrix that induces partial regeneration of adult mammalian skin. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[74] G. Dunn,et al. Contact guidance on oriented collagen gels. , 1978, Experimental cell research.
[75] R. Siegel. Collagen cross-linking. Synthesis of collagen cross-links in vitro with highly purified lysyl oxidase. , 1976, The Journal of biological chemistry.
[76] M. S. Steinberg,et al. Does differential adhesion govern self-assembly processes in histogenesis? Equilibrium configurations and the emergence of a hierarchy among populations of embryonic cells. , 1970, The Journal of experimental zoology.
[77] Malcolm S. Steinberg,et al. Reconstruction of Tissues by Dissociated Cells , 1963 .
[78] R. B. Potts. Some generalized order-disorder transformations , 1952, Mathematical Proceedings of the Cambridge Philosophical Society.
[79] E. Ising. Beitrag zur Theorie des Ferromagnetismus , 1925 .
[80] G. Gerlitz,et al. The role of chromatin structure in cell migration. , 2011, Trends in cell biology.
[81] Luigi Preziosi,et al. Individual Cell-Based Model for In-Vitro Mesothelial Invasion of Ovarian Cancer , 2010 .
[82] James A. Glazier,et al. Magnetization to Morphogenesis: A Brief History of the Glazier-Graner-Hogeweg Model , 2007 .
[83] Roeland M. H. Merks,et al. II. 4 The Glazier–Graner–Hogeweg Model: Extensions, Future Directions, and Opportunities for Further Study , 2007 .
[84] P. Hogeweg,et al. The Cellular Potts Model and Biophysical Properties of Cells, Tissues and Morphogenesis , 2007 .
[85] Richard B. Dickinson,et al. Quantitative Analysis of Adhesion-Mediated Cell Migration in Three-Dimensional Gels of RGD-Grafted Collagen , 2004, Annals of Biomedical Engineering.
[86] Dennis Discher,et al. Substrate compliance versus ligand density in cell on gel responses. , 2004, Biophysical journal.
[87] T. Pollard,et al. Cellular Motility Driven by Assembly and Disassembly of Actin Filaments , 2003, Cell.
[88] P. Friedl,et al. The Journal of Cell Biology , 2002 .
[89] G. Ville,et al. Collagen cross-linking. , 1989, The International journal of biochemistry.
[90] Dunn Ga,et al. Characterising a kinesis response: time averaged measures of cell speed and directional persistence. , 1983 .
[91] M. S. Steinberg,et al. Reconstruction of tissues by dissociated cells. Some morphogenetic tissue movements and the sorting out of embryonic cells may have a common explanation. , 1963, Science.