Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments.

[1]  M. Grunwald.  Principles Of Condensed Matter Physics , 2016 .

[2]  Gaudenz Danuser,et al.  Quantifying Modes of 3D Cell Migration. , 2015, Trends in cell biology.

[3]  Gaudenz Danuser,et al.  Functional hierarchy of redundant actin assembly factors revealed by fine-grained registration of intrinsic image fluctuations. , 2015, Cell systems.

[4]  E. Betzig,et al.  Vinculin is required for cell polarization, migration, and extracellular matrix remodeling in 3D collagen , 2015, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[5]  Gaudenz Danuser,et al.  Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy , 2015, Biophysical journal.

[6]  Erik Sahai,et al.  Intravital Imaging Reveals How BRAF Inhibition Generates Drug-Tolerant Microenvironments with High Integrin β1/FAK Signaling , 2015, Cancer cell.

[7]  Andrew Callan-Jones,et al.  Confinement and Low Adhesion Induce Fast Amoeboid Migration of Slow Mesenchymal Cells , 2015, Cell.

[8]  Monika Ritsch-Marte,et al.  Cortical Contractility Triggers a Stochastic Switch to Fast Amoeboid Cell Motility , 2015, Cell.

[9]  Ernst H K Stelzer,et al.  Light-sheet fluorescence microscopy for quantitative biology , 2014, Nature Methods.

[10]  Gaudenz Danuser,et al.  Using fluctuation analysis to establish causal relations between cellular events without experimental perturbation. , 2014, Biophysical journal.

[11]  V. Weaver,et al.  The extracellular matrix modulates the hallmarks of cancer , 2014, EMBO reports.

[12]  Bojana Gligorijevic,et al.  Multiparametric Classification Links Tumor Microenvironments with Tumor Cell Phenotype , 2014, PLoS biology.

[13]  Wesley R. Legant,et al.  Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution , 2014, Science.

[14]  Christopher S. Chen,et al.  Long Range Force Transmission in Fibrous Matrices Enabled by Tension-Driven Alignment of Fibers , 2014, bioRxiv.

[15]  Michael W Davidson,et al.  Force engages vinculin and promotes tumor progression by enhancing PI3K activation of phosphatidylinositol (3,4,5)-triphosphate. , 2014, Cancer research.

[16]  K. Dholakia,et al.  Light-sheet microscopy using an Airy beam , 2014, Nature Methods.

[17]  I. Tsarfaty,et al.  Met-induced membrane blebbing leads to amoeboid cell motility and invasion , 2014, Oncogene.

[18]  Pavel Tomancak,et al.  Guide to light-sheet microscopy for adventurous biologists , 2014, Nature Methods.

[19]  Kevin M. Dean,et al.  Uniform and scalable light-sheets generated by extended focusing. , 2014, Optics express.

[20]  Chris H. Rycroft,et al.  Rapid disorganization of mechanically interacting systems of mammary acini , 2013, Proceedings of the National Academy of Sciences.

[21]  Erez Raz,et al.  The role and regulation of blebs in cell migration , 2013, Current opinion in cell biology.

[22]  Philipp J. Keller,et al.  Imaging Morphogenesis: Technological Advances and Biological Insights , 2013, Science.

[23]  Philipp J. Keller,et al.  Whole-brain functional imaging at cellular resolution using light-sheet microscopy , 2013, Nature Methods.

[24]  D. Fletcher,et al.  Patterned Collagen Fibers Orient Branching Mammary Epithelium through Distinct Signaling Modules , 2013, Current Biology.

[25]  R. T. Hart,et al.  Fibers in the extracellular matrix enable long-range stress transmission between cells. , 2013, Biophysical journal.

[26]  J. Dinić,et al.  Actin filaments attachment at the plasma membrane in live cells cause the formation of ordered lipid domains. , 2013, Biochimica et biophysica acta.

[27]  John D. Minna,et al.  Human Lung Epithelial Cells Progressed to Malignancy through Specific Oncogenic Manipulations , 2013, Molecular Cancer Research.

[28]  Maryna Kapustina,et al.  Compression and dilation of the membrane-cortex layer generates rapid changes in cell shape , 2013, The Journal of cell biology.

[29]  Hunter L. Elliott,et al.  Fluctuation analysis of activity biosensor images for the study of information flow in signaling pathways. , 2013, Methods in enzymology.

[30]  Sergey V. Plotnikov,et al.  Force Fluctuations within Focal Adhesions Mediate ECM-Rigidity Sensing to Guide Directed Cell Migration , 2012, Cell.

[31]  M. Davidson,et al.  Noninvasive Imaging beyond the Diffraction Limit of 3D Dynamics in Thickly Fluorescent Specimens , 2012, Cell.

[32]  Ulrich Kubitscheck,et al.  Scanned light sheet microscopy with confocal slit detection. , 2012, Optics Express.

[33]  Shreyas S. Rao,et al.  Inherent Interfacial Mechanical Gradients in 3D Hydrogels Influence Tumor Cell Behaviors , 2012, PloS one.

[34]  Erik S. Welf,et al.  Migrating fibroblasts reorient directionality by a metastable, PI3K-dependent mechanism , 2012, The Journal of cell biology.

[35]  J. Hammer,et al.  Actin retrograde flow and actomyosin II arc contraction drive receptor cluster dynamics at the immunological synapse in Jurkat T cells , 2012, Molecular biology of the cell.

[36]  A. Rohrbach,et al.  Propagation stability of self-reconstructing Bessel beams enables contrast-enhanced imaging in thick media , 2012, Nature Communications.

[37]  M. Davidson,et al.  Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination , 2011, Nature Methods.

[38]  Erik S. Welf,et al.  In chemotaxing fibroblasts, both high-fidelity and weakly biased cell movements track the localization of PI3K signaling. , 2011, Biophysical journal.

[39]  Paolo P. Provenzano,et al.  Aligned Collagen Is a Prognostic Signature for Survival in Human Breast Carcinoma Address Reprint Requests to See Related Commentary on Page 966 , 2022 .

[40]  Michael W. Davidson,et al.  Nanoscale architecture of integrin-based cell adhesions , 2010, Nature.

[41]  A. Rohrbach,et al.  Microscopy with self-reconstructing beams , 2010 .

[42]  Alba Diz-Muñoz,et al.  Control of Directed Cell Migration In Vivo by Membrane-to-Cortex Attachment , 2010, PLoS biology.

[43]  Philipp J. Keller,et al.  Fast, high-contrast imaging of animal development with scanned light sheet–based structured-illumination microscopy , 2010, Nature Methods.

[44]  David A. Rand,et al.  Measurement of single-cell dynamics , 2010, Nature.

[45]  Erik S. Welf,et al.  Directional persistence of cell migration coincides with stability of asymmetric intracellular signaling. , 2010, Biophysical journal.

[46]  Lawrence J Bonassar,et al.  Processing of type I collagen gels using nonenzymatic glycation. , 2009, Journal of biomedical materials research. Part A.

[47]  M. Schell,et al.  Neuronal IP3 3-kinase is an F-actin-bundling protein: role in dendritic targeting and regulation of spine morphology. , 2009, Molecular biology of the cell.

[48]  Pascal Fua,et al.  Steerable Features for Statistical 3D Dendrite Detection , 2009, MICCAI.

[49]  Kevin W. Eliceiri,et al.  Matrix density-induced mechanoregulation of breast cell phenotype, signaling, and gene expression through a FAK-ERK linkage , 2009, Oncogene.

[50]  David J. Mooney,et al.  Growth Factors, Matrices, and Forces Combine and Control Stem Cells , 2009, Science.

[51]  Jan Huisken,et al.  Selective plane illumination microscopy techniques in developmental biology , 2009, Development.

[52]  M. Rao,et al.  Nanoclusters of GPI-Anchored Proteins Are Formed by Cortical Actin-Driven Activity , 2008, Cell.

[53]  Philipp J. Keller,et al.  Reconstruction of Zebrafish Early Embryonic Development by Scanned Light Sheet Microscopy , 2008, Science.

[54]  Guillaume Charras,et al.  A short history of blebbing , 2008, Journal of microscopy.

[55]  Guillaume Charras,et al.  Blebs lead the way: how to migrate without lamellipodia , 2008, Nature Reviews Molecular Cell Biology.

[56]  J. Hancock,et al.  Using plasma membrane nanoclusters to build better signaling circuits. , 2008, Trends in cell biology.

[57]  K. Jaqaman,et al.  Robust single particle tracking in live cell time-lapse sequences , 2008, Nature Methods.

[58]  O. Fackler,et al.  Cell motility through plasma membrane blebbing , 2008, The Journal of cell biology.

[59]  L Mahadevan,et al.  Life and times of a cellular bleb. , 2008, Biophysical journal.

[60]  F. Pampaloni,et al.  The third dimension bridges the gap between cell culture and live tissue , 2007, Nature Reviews Molecular Cell Biology.

[61]  Andreas Stemmer,et al.  Virtual slit scanning microscopy , 2007, Histochemistry and Cell Biology.

[62]  Jan Huisken,et al.  Multi-view image fusion improves resolution in three-dimensional microscopy. , 2007, Optics express.

[63]  P. Verveer,et al.  High-resolution three-dimensional imaging of large specimens with light sheet–based microscopy , 2007, Nature Methods.

[64]  Paolo P. Provenzano,et al.  Collagen reorganization at the tumor-stromal interface facilitates local invasion , 2006, BMC medicine.

[65]  Timothy J. Mitchison,et al.  Reassembly of contractile actin cortex in cell blebs , 2006, The Journal of cell biology.

[66]  Erez Raz,et al.  Migration of zebrafish primordial germ cells: a role for myosin contraction and cytoplasmic flow. , 2006, Developmental cell.

[67]  K. Hahn,et al.  Imaging and photobleach correction of Mero-CBD, sensor of endogenous Cdc42 activation. , 2006, Methods in enzymology.

[68]  Mathews Jacob,et al.  Three-dimensional feature detection using optimal steerable filters , 2005, IEEE International Conference on Image Processing 2005.

[69]  L. Mahadevan,et al.  Non-equilibration of hydrostatic pressure in blebbing cells , 2005, Nature.

[70]  Clifford M. Babbey,et al.  Performance comparison between the high‐speed Yokogawa spinning disc confocal system and single‐point scanning confocal systems , 2005, Journal of microscopy.

[71]  J. Sibarita.  Deconvolution microscopy. , 2005, Advances in biochemical engineering/biotechnology.

[72]  F. Del Bene,et al.  Optical Sectioning Deep Inside Live Embryos by Selective Plane Illumination Microscopy , 2004, Science.

[73]  Mathews Jacob,et al.  Design of steerable filters for feature detection using canny-like criteria , 2004, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[74]  E. Brown,et al.  Virulence potential of the staphylococcal adhesin CNA in experimental arthritis is determined by its affinity for collagen. , 2004, The Journal of infectious diseases.

[75]  T. Meyer,et al.  Spatial Sensing in Fibroblasts Mediated by 3′ Phosphoinositides , 2000, The Journal of cell biology.

[76]  Tobias Meyer,et al.  Translocation and Reversible Localization of Signaling Proteins A Dynamic Future for Signal Transduction , 2000, Cell.

[77]  R. Tranquillo,et al.  Mechanisms of stiffening and strengthening in media-equivalents fabricated using glycation. , 2000, Journal of biomechanical engineering.

[78]  Ross T. Whitaker,et al.  Partitioning 3D Surface Meshes Using Watershed Segmentation , 1999, IEEE Trans. Vis. Comput. Graph..

[79]  Mark Meyer,et al.  Implicit fairing of irregular meshes using diffusion and curvature flow , 1999, SIGGRAPH.

[80]  T. Wilson,et al.  The Role of the Pinhole in Confocal Imaging Systems , 1990 .

[81]  J. Pawley,et al.  Handbook of Biological Confocal Microscopy , 1990, Springer US.

[82]  N. Otsu.  A threshold selection method from gray level histograms , 1979 .