Next-generation sequencing

[1]  Ryan D. Morin,et al.  Mutation of FOXL2 in granulosa-cell tumors of the ovary. , 2009, The New England journal of medicine.

[2]  J. Reis-Filho,et al.  Histological and molecular types of breast cancer: is there a unifying taxonomy? , 2009, Nature Reviews Clinical Oncology.

[3]  Felipe C Geyer,et al.  Mucinous and neuroendocrine breast carcinomas are transcriptionally distinct from invasive ductal carcinomas of no special type , 2009, Modern Pathology.

[4]  Ryan D. Morin,et al.  Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution , 2009, Nature.

[5]  J. Reis-Filho,et al.  Genetic characterization of breast cancer and implications for clinical management , 2009, Journal of cellular and molecular medicine.

[6]  Ken Chen,et al.  Recurring mutations found by sequencing an acute myeloid leukemia genome. , 2009, The New England journal of medicine.

[7]  J. Kitzman,et al.  Personalized Copy-Number and Segmental Duplication Maps using Next-Generation Sequencing , 2009, Nature Genetics.

[8]  M. Marra,et al.  Massively parallel sequencing: the next big thing in genetic medicine. , 2009, American journal of human genetics.

[9]  J. Kitzman,et al.  Acquired copy number alterations in adult acute myeloid leukemia genomes , 2009, Proceedings of the National Academy of Sciences.

[10]  J. Reis-Filho,et al.  Microarray-based Gene Expression Profiling as a Clinical Tool for Breast Cancer Management: Are We There Yet? , 2009, International journal of surgical pathology.

[11]  S. Luo,et al.  Chimeric transcript discovery by paired-end transcriptome sequencing , 2009, Proceedings of the National Academy of Sciences.

[12]  A. Ashworth,et al.  Mixed micropapillary–ductal carcinomas of the breast: a genomic and immunohistochemical analysis of morphologically distinct components , 2009, The Journal of pathology.

[13]  R. Lister,et al.  Finding the fifth base: genome-wide sequencing of cytosine methylation. , 2009, Genome research.

[14]  M. Stratton,et al.  The cancer genome , 2009, Nature.

[15]  K. Voelkerding,et al.  Next-generation sequencing: from basic research to diagnostics. , 2009, Clinical chemistry.

[16]  E. Liu,et al.  Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses. , 2009, Genome research.

[17]  Brian J. Stevenson,et al.  Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line , 2009, Proceedings of the National Academy of Sciences.

[18]  Joakim Lundeberg,et al.  Generations of sequencing technologies. , 2009, Genomics.

[19]  A. Visel,et al.  ChIP-seq accurately predicts tissue-specific activity of enhancers , 2009, Nature.

[20]  Lee T. Sam,et al.  Transcriptome Sequencing to Detect Gene Fusions in Cancer , 2009, Nature.

[21]  G. Azabdaftari,et al.  Refinement of breast cancer classification by molecular characterization of histological special types , 2009 .

[22]  Christopher A. Miller,et al.  A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome. , 2009, Genome research.

[23]  Emily H Turner,et al.  Targeted Capture and Massively Parallel Sequencing of Twelve Human Exomes , 2009, Nature.

[24]  M. Gerstein,et al.  RNA-Seq: a revolutionary tool for transcriptomics , 2009, Nature Reviews Genetics.

[25]  Alan Ashworth,et al.  Drug resistance caused by reversion mutation. , 2008, Cancer research.

[26]  J. Reis-Filho,et al.  Breast cancer special types: why bother? , 2008, The Journal of pathology.

[27]  C. Antonescu,et al.  Primary and secondary kinase genotypes correlate with the biological and clinical activity of sunitinib in imatinib-resistant gastrointestinal stromal tumor. , 2008, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[28]  James R. Downing,et al.  Genomic Analysis of the Clonal Origins of Relapsed Acute Lymphoblastic Leukemia , 2008, Science.

[29]  Dawei Li,et al.  The diploid genome sequence of an Asian individual , 2008, Nature.

[30]  W. Grody,et al.  Keeping up with the next generation: massively parallel sequencing in clinical diagnostics. , 2008, The Journal of molecular diagnostics : JMD.

[31]  J. Komorowski,et al.  Somatic mosaicism for copy number variation in differentiated human tissues , 2008, Human mutation.

[32]  M. Marra,et al.  Applications of next-generation sequencing technologies in functional genomics. , 2008, Genomics.

[33]  Marcel H. Schulz,et al.  A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome , 2008, Science.

[34]  T. Mikkelsen,et al.  Genome-scale DNA methylation maps of pluripotent and differentiated cells , 2008, Nature.

[35]  Antony V. Cox,et al.  Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing , 2008, Nature Genetics.

[36]  J. Lupski,et al.  The complete genome of an individual by massively parallel DNA sequencing , 2008, Nature.

[37]  B. Karlan,et al.  Secondary BRCA1 mutations in BRCA1-mutated ovarian carcinomas with platinum resistance. , 2008, Cancer research.

[38]  Lajos Pusztai,et al.  Current status of prognostic profiling in breast cancer. , 2008, The oncologist.

[39]  U. McDermott,et al.  The T790M “gatekeeper” mutation in EGFR mediates resistance to low concentrations of an irreversible EGFR inhibitor , 2008, Molecular Cancer Therapeutics.

[40]  Jan Komorowski,et al.  Phenotypically concordant and discordant monozygotic twins display different DNA copy-number-variation profiles. , 2008, American journal of human genetics.

[41]  Jorge S. Reis-Filho,et al.  Resistance to therapy caused by intragenic deletion in BRCA2 , 2008, Nature.

[42]  F. Couch,et al.  Secondary mutations as a mechanism of cisplatin resistance in BRCA2-mutated cancers , 2008, Nature.

[43]  A. Sparks,et al.  The Genomic Landscapes of Human Breast and Colorectal Cancers , 2007, Science.

[44]  A. Ashworth,et al.  Utilizing RNA interference to enhance cancer drug discovery , 2007, Nature Reviews Drug Discovery.

[45]  William Stafford Noble,et al.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project , 2007, Nature.

[46]  J. Reis-Filho,et al.  Getting it right: designing microarray (and not ‘microawry’) comparative genomic hybridization studies for cancer research , 2007, Laboratory Investigation.

[47]  E. Birney,et al.  Patterns of somatic mutation in human cancer genomes , 2007, Nature.

[48]  J. Haerting,et al.  Gene-expression signatures in breast cancer. , 2003, The New England journal of medicine.

[49]  International Human Genome Sequencing Consortium Initial sequencing and analysis of the human genome , 2001, Nature.

[50]  D. Mccormick Sequence the Human Genome , 1986, Bio/Technology.

[51]  H. Bush,et al.  Breast Cancer Research , 1978, British Journal of Cancer.