Detection-aided liver lesion segmentation using deep learning

A fully automatic technique for segmenting the liver and localizing its unhealthy tissues is a convenient tool in order to diagnose hepatic diseases and assess the response to the according treatments. In this work we propose a method to segment the liver and its lesions from Computed Tomography (CT) scans using Convolutional Neural Networks (CNNs), that have proven good results in a variety of computer vision tasks, including medical imaging. The network that segments the lesions consists of a cascaded architecture, which first focuses on the region of the liver in order to segment the lesions on it. Moreover, we train a detector to localize the lesions, and mask the results of the segmentation network with the positive detections. The segmentation architecture is based on DRIU, a Fully Convolutional Network (FCN) with side outputs that work on feature maps of different resolutions, to finally benefit from the multi-scale information learned by different stages of the network. The main contribution of this work is the use of a detector to localize the lesions, which we show to be beneficial to remove false positives triggered by the segmentation network. Source code and models are available at this https URL .

[1]  P. Cochat,et al.  Et al , 2008, Archives de pediatrie : organe officiel de la Societe francaise de pediatrie.

[2]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[3]  Andrew Zisserman,et al.  Very Deep Convolutional Networks for Large-Scale Image Recognition , 2014, ICLR.

[4]  Luc Van Gool,et al.  Deep Retinal Image Understanding , 2016, MICCAI.

[5]  David Dagan Feng,et al.  Automatic Liver Lesion Detection using Cascaded Deep Residual Networks , 2017, ArXiv.

[6]  Rob Fergus,et al.  Predicting Depth, Surface Normals and Semantic Labels with a Common Multi-scale Convolutional Architecture , 2014, 2015 IEEE International Conference on Computer Vision (ICCV).

[7]  Luc Van Gool,et al.  One-Shot Video Object Segmentation , 2016, 2017 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[8]  Sebastian J. Schlecht,et al.  Automatic Liver and Tumor Segmentation of CT and MRI Volumes using Cascaded Fully Convolutional Neural Networks , 2017, ArXiv.

[9]  Michael S. Bernstein,et al.  ImageNet Large Scale Visual Recognition Challenge , 2014, International Journal of Computer Vision.

[10]  Xiao Han,et al.  Automatic Liver Lesion Segmentation Using A Deep Convolutional Neural Network Method , 2017, ArXiv.

[11]  Vladlen Koltun,et al.  Efficient Inference in Fully Connected CRFs with Gaussian Edge Potentials , 2011, NIPS.