Two cis‐prolines in the Bence‐Jones protein Rei and the cis‐pro‐bend

The stabilities of the cisand transforms of the X-Pro peptide group differ only slightly by -2.0 to 2.0 kcal/mol-’ for linear polypeptides [ 11. In small cyclic peptides, the ring closure enforces the formation of cis-peptide groups [2,3]. It is surprising, therefore, that there are only few reports of X-Pro cis-peptide groups found in globular protein molecules. Furthermore, most of these are questioned by the authors due to the uncertainty in the interpretation of a Fourier map calculated with phases obtained from isomorphous replacement [4,5a,Sb,6-81. During the course of the constrained crystallographic refinement of the crystal structure of the Bence-Jones Protein Rei [9a,9b] we found evidence for two X-Pro cis-peptide groups and were able to confirm this by difference Fourier methods.

[1]  H Formanek,et al.  The atomic structure of erythrocruorin in the light of the chemical sequence and its comparison with myoglobin. , 1971, European journal of biochemistry.

[2]  J. Kraut,et al.  Atomic coordinates for subtilisin BPN' (or Novo). , 1971, Biochemical and biophysical research communications.

[3]  R Diamond,et al.  Real-space refinement of the structure of hen egg-white lysozyme. , 1977, Journal of molecular biology.

[4]  J. L. Crawford,et al.  The reverse turn as a polypeptide conformation in globular proteins. , 1973, Proceedings of the National Academy of Sciences of the United States of America.

[5]  G. Kartha,et al.  Structure and Conformation of a Cyclic Tripeptide , 1974, Nature.

[6]  R. Huber,et al.  Crystal and molecular structure of a dimer composed of the variable portions of the Bence-Jones protein REI. , 1974, European journal of biochemistry.

[7]  I. Karle The conformation of the sodium complex of a biologically active analog of antamanide in the crystalline state. , 1974, Biochemistry.

[8]  I. C. O. B. Nomenclature IUPAC-IUB Commission on Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains. Tentative rules (1969). , 1970, Biochemistry.

[9]  A. W. Hanson,et al.  The three-dimensional structure of ribonuclease-S. Interpretation of an electron density map at a nominal resolution of 2 A. , 1970, The Journal of biological chemistry.

[10]  K. Wüthrich,et al.  A novel approach for studies of the molecular conformations in flexible polypeptides , 1974, FEBS letters.

[11]  J. Kraut,et al.  Structure of Subtilisin BPN′ at 2.5 Å Resolution , 1969, Nature.