Computational Approaches to Chemical Hazard Assessment
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[1] Daniel P. Russo,et al. Global Analysis of Publicly Available Safety Data for 9,801 Substances Registered under REACH from 2008–2014 , 2016, ALTEX.
[2] J. Belden,et al. Challenges in regulating pesticide mixtures , 2004 .
[3] Ronan Bureau,et al. Introduction of Jumping Fragments in Combination with QSARs for the Assessment of Classification in Ecotoxicology , 2010, J. Chem. Inf. Model..
[4] Xin Wen,et al. BindingDB: a web-accessible database of experimentally determined protein–ligand binding affinities , 2006, Nucleic Acids Res..
[5] Bin Chen,et al. Assessing Drug Target Association Using Semantic Linked Data , 2012, PLoS Comput. Biol..
[6] Hao Zhu,et al. Analysis of Draize Eye Irritation Testing and its Prediction by Mining Publicly Available 2008–2014 REACH Data , 2016, ALTEX.
[7] H. Kubinyi. Comparative Molecular Field Analysis (CoMFA) , 2002 .
[8] Alexander Tropsha,et al. Trust, But Verify: On the Importance of Chemical Structure Curation in Cheminformatics and QSAR Modeling Research , 2010, J. Chem. Inf. Model..
[9] Florian Nigsch,et al. Computational toxicology: an overview of the sources of data and of modelling methods. , 2009, Expert opinion on drug metabolism & toxicology.
[10] I. Gutman. Degree-Based Topological Indices , 2013 .
[11] Thomas Hartung,et al. Food for thought ... on alternative methods for cosmetics safety testing. , 2008, ALTEX.
[12] M. Randic. Characterization of molecular branching , 1975 .
[13] Luis G Valerio,et al. Characterization and validation of an in silico toxicology model to predict the mutagenic potential of drug impurities. , 2012, Toxicology and applied pharmacology.
[14] Kunal Roy,et al. Advances in QSAR Modeling: Applications in Pharmaceutical, Chemical, Food, Agricultural and Environmental Sciences , 2017 .
[15] D. Blacker. Food for thought. , 2013, JAMA neurology.
[16] Richard A Becker,et al. Read-across approaches--misconceptions, promises and challenges ahead. , 2014, ALTEX.
[17] Christoph Steinbeck,et al. The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013 , 2012, Nucleic Acids Res..
[18] Andrew Worth,et al. Applying Adverse Outcome Pathways (AOPs) to support Integrated Approaches to Testing and Assessment (IATA). , 2014, Regulatory toxicology and pharmacology : RTP.
[19] Volkmar Schröder,et al. UN-GHS — Physical hazard classifications of chemicals: A critical review of combinations of hazard classes , 2017 .
[20] Alexandra Maertens,et al. Analysis of Publically Available Skin Sensitization Data from REACH Registrations 2008–2014 , 2016, ALTEX.
[21] Chris Winder,et al. The development of the globally harmonized system (GHS) of classification and labelling of hazardous chemicals. , 2005, Journal of hazardous materials.
[22] Kenichi Fukui,et al. A Molecular Orbital Theory of Reactivity in Aromatic Hydrocarbons , 1952 .
[23] Bin Chen,et al. Predicting drug target interactions using meta-path-based semantic network analysis , 2016, BMC Bioinformatics.
[24] A Mani-Varnosfaderani,et al. Therapeutic index modeling and predictive QSAR of novel thiazolidin-4-one analogs against Toxoplasma gondii. , 2015, European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences.
[25] Bin Chen,et al. Chem2Bio2RDF: a semantic framework for linking and data mining chemogenomic and systems chemical biology data , 2010, BMC Bioinformatics.
[26] John M. Barnard,et al. Clustering of chemical structures on the basis of two-dimensional similarity measures , 1992, J. Chem. Inf. Comput. Sci..
[27] Igor Linkov,et al. From "Weight of Evidence" to Quantitative Data Integration using Multicriteria Decision Analysis and Bayesian Methods , 2015, ALTEX.
[28] Gang Fu,et al. PubChem Substance and Compound databases , 2015, Nucleic Acids Res..
[29] M Liebsch,et al. Regulatory use of (Q)SARs in toxicological hazard assessment strategies , 2004, SAR and QSAR in environmental research.
[30] Desire L. Massart,et al. Prediction of gas chromatographic retention indexes with topological, physicochemical, and quantum chemical parameters , 1983 .
[31] Hilda Witters,et al. A European perspective on alternatives to animal testing for environmental hazard identification and risk assessment. , 2013, Regulatory toxicology and pharmacology : RTP.
[32] N. Nikolova,et al. International Union of Pure and Applied Chemistry, LUMO energy ± The Lowest Unoccupied Molecular Orbital (LUMO) , 2022 .
[33] Manuela Pavan,et al. The Characterisation of (Quantitative) Structure-Activity Relationships: Preliminary Guidance , 2005 .
[34] Paola Gramatica,et al. Introduction General Considerations , 2022 .
[35] Maik Moeller,et al. An Introduction To Chemoinformatics , 2016 .
[36] E. Matthews,et al. An in silico expert system for the identification of eye irritants , 2015, SAR and QSAR in environmental research.
[37] Thomas Hartung,et al. Integrated Testing Strategies (ITS) for safety assessment. , 2015, ALTEX.
[38] Julie B. Zimmerman,et al. Toward molecular design for hazard reduction—fundamental relationships between chemical properties and toxicity , 2010 .
[39] M. Karelson,et al. Quantum-Chemical Descriptors in QSAR/QSPR Studies. , 1996, Chemical reviews.
[40] Lourdes Santana,et al. A QSAR model for in silico screening of MAO-A inhibitors. Prediction, synthesis, and biological assay of novel coumarins. , 2006, Journal of medicinal chemistry.
[41] Alexandra Maertens,et al. Integrated testing strategies for safety assessments. , 2013, ALTEX.
[42] Gergana Dimitrova,et al. A Stepwise Approach for Defining the Applicability Domain of SAR and QSAR Models , 2005, J. Chem. Inf. Model..
[43] Anna Tsantili-Kakoulidou,et al. Applying quantitative structure-activity relationship (QSAR) methodology for modeling postmortem redistribution of benzodiazepines and tricyclic antidepressants. , 2014, Journal of analytical toxicology.
[44] Mohanad El-Harbawi,et al. Development of a novel mathematical model using a group contribution method for prediction of ionic liquid toxicities. , 2011, Chemosphere.
[45] T. Hartung. Evolution of toxicological science: the need for change , 2017 .
[46] Valérie Zuang,et al. First alternative method validated by a retrospective weight-of-evidence approach to replace the Draize eye test for the identification of non-irritant substances for a defined applicability domain. , 2010, ALTEX.
[47] R. J. Doerksen,et al. Topological polar surface area: a useful descriptor in 2D-QSAR. , 2009, Current medicinal chemistry.
[48] Tao Jiang,et al. ChemmineR: a compound mining framework for R , 2008, Bioinform..
[49] Chris Morley,et al. Open Babel: An open chemical toolbox , 2011, J. Cheminformatics.
[50] Michael J. Keiser,et al. Relating protein pharmacology by ligand chemistry , 2007, Nature Biotechnology.
[51] V. Poroikov,et al. Directions in QSAR Modeling for Regulatory Uses in OECD Member Countries, EU and in Russia , 2008, Journal of environmental science and health. Part C, Environmental carcinogenesis & ecotoxicology reviews.
[52] M. Cronin,et al. Computational methods for the prediction of drug toxicity. , 2000, Current opinion in drug discovery & development.
[53] David Weininger,et al. SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules , 1988, J. Chem. Inf. Comput. Sci..
[54] Charles W. Schmidt,et al. TSCA 2.0: A New Era in Chemical Risk Management , 2016, Environmental health perspectives.
[55] Lingxiao Zhou,et al. Combining spatial and chemical information for clustering pharmacophores , 2014, BMC Bioinformatics.
[56] Walter Thiel,et al. Semiempirical quantum–chemical methods , 2014 .
[57] Joanna Jaworska. Integrated Testing Strategies for Skin Sensitization Hazard and Potency Assessment—State of the Art and Challenges , 2016 .
[58] H. Shiraishi,et al. Application of chemical reaction mechanistic domains to an ecotoxicity QSAR model, the KAshinhou Tool for Ecotoxicity (KATE) , 2011, SAR and QSAR in environmental research.
[59] Thomas Hartung,et al. Making big sense from big data in toxicology by read-across. , 2016, ALTEX.
[60] Gavin Maxwell,et al. From pathways to people: applying the adverse outcome pathway (AOP) for skin sensitization to risk assessment. , 2013, ALTEX.
[61] Alexandra Maertens,et al. Analysis of Public Oral Toxicity Data from REACH Registrations 2008–2014 , 2016, ALTEX.
[62] T Hartung,et al. Toward an evidence-based toxicology , 2006, Human & experimental toxicology.
[63] Alexandra Maertens,et al. Probabilistic hazard assessment for skin sensitization potency by dose–response modeling using feature elimination instead of quantitative structure–activity relationships , 2015, Journal of applied toxicology : JAT.
[64] D. Weed. Weight of Evidence: A Review of Concept and Methods , 2005, Risk analysis : an official publication of the Society for Risk Analysis.
[65] Ivonne M C M Rietjens,et al. Promises and pitfalls of quantitative structure-activity relationship approaches for predicting metabolism and toxicity. , 2008, Chemical research in toxicology.
[66] J C Madden,et al. Structure-based modelling in reproductive toxicology: (Q)SARs for the placental barrier , 2007, SAR and QSAR in environmental research.
[67] Ellen K Silbergeld,et al. Regulating chemicals: law, science, and the unbearable burdens of regulation. , 2015, Annual review of public health.
[68] Timothy F. Malloy,et al. Leveraging the new predictive toxicology paradigm: alternative testing strategies in regulatory decision-making , 2016 .
[69] Egon L. Willighagen,et al. The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching , 2017, Journal of Cheminformatics.
[70] R. Cramer,et al. Comparative molecular field analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins. , 1988, Journal of the American Chemical Society.
[71] Alexandra Maertens,et al. t4 report: Toward Good Read-Across Practice (GRAP) Guidance , 2016, ALTEX.
[72] Stephen R. Heller,et al. InChI, the IUPAC International Chemical Identifier , 2015, Journal of Cheminformatics.
[73] J E Ridings,et al. Computer prediction of possible toxic action from chemical structure: an update on the DEREK system. , 1996, Toxicology.
[74] J. Dearden,et al. QSAR modeling: where have you been? Where are you going to? , 2014, Journal of medicinal chemistry.
[75] Naomi L Kruhlak,et al. Identification of structure-activity relationships for adverse effects of pharmaceuticals in humans: Part C: use of QSAR and an expert system for the estimation of the mechanism of action of drug-induced hepatobiliary and urinary tract toxicities. , 2009, Regulatory toxicology and pharmacology : RTP.
[76] Tomasz Puzyn,et al. Calculation of Quantum-Mechanical Descriptors for QSPR at the DFT Level: Is It Necessary? , 2008, J. Chem. Inf. Model..
[77] Jan A. Kors,et al. Consistency of systematic chemical identifiers within and between small-molecule databases , 2012, Journal of Cheminformatics.
[78] John P. Overington,et al. ChEMBL: a large-scale bioactivity database for drug discovery , 2011, Nucleic Acids Res..
[79] Sabcho D Dimitrov,et al. A systematic approach to simulating metabolism in computational toxicology. I. The TIMES heuristic modelling framework. , 2004, Current pharmaceutical design.
[80] Thomas Hartung,et al. Food for thought... on evidence-based toxicology. , 2009, ALTEX.
[81] Francois Busquet,et al. The need for strategic development of safety sciences. , 2017, ALTEX.
[82] Judy Strickland,et al. Bayesian integrated testing strategy (ITS) for skin sensitization potency assessment: a decision support system for quantitative weight of evidence and adaptive testing strategy , 2015, Archives of Toxicology.
[83] I Kimber,et al. Contact allergenic potency: correlation of human and local lymph node assay data. , 2001, American journal of contact dermatitis : official journal of the American Contact Dermatitis Society.
[84] Arthur Dalby,et al. Description of several chemical structure file formats used by computer programs developed at Molecular Design Limited , 1992, J. Chem. Inf. Comput. Sci..
[85] Evan Bolton,et al. An overview of the PubChem BioAssay resource , 2009, Nucleic Acids Res..
[86] Evan Bolton,et al. Similar compounds versus similar conformers: complementarity between PubChem 2-D and 3-D neighboring sets , 2016, Journal of Cheminformatics.
[87] Thomas Hartung,et al. Food for thought...on alternative methods for chemical safety testing. , 2010, ALTEX.
[88] Nicole Kleinstreuer,et al. Supporting read-across using biological data. , 2016, ALTEX.
[89] E Benfenati,et al. Automatic knowledge extraction from chemical structures: the case of mutagenicity prediction , 2013, SAR and QSAR in environmental research.
[90] Ivan Rusyn,et al. Predicting drug-induced hepatotoxicity using QSAR and toxicogenomics approaches. , 2011, Chemical research in toxicology.
[91] Grace Patlewicz,et al. Computational Methods to Predict Drug Safety , 2006 .
[92] Igor V. Tetko,et al. Applicability Domains for Classification Problems: Benchmarking of Distance to Models for Ames Mutagenicity Set , 2010, J. Chem. Inf. Model..