Adsorption and Orientation of Human Islet Amyloid Polypeptide (hIAPP) Monomer at Anionic Lipid Bilayers: Implications for Membrane-Mediated Aggregation
暂无分享,去创建一个
Guanghong Wei | Guanghong Wei | Yan Jia | Zhenyu Qian | Yun Zhang | Yun Zhang | Yan Jia | Zhenyu Qian
[1] H. Berendsen,et al. Interaction Models for Water in Relation to Protein Hydration , 1981 .
[2] W. Kabsch,et al. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features , 1983, Biopolymers.
[3] H. Berendsen,et al. Molecular dynamics with coupling to an external bath , 1984 .
[4] R. Turner,et al. Purification and characterization of a peptide from amyloid-rich pancreases of type 2 diabetic patients. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[5] P. Kollman,et al. Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models , 1992 .
[6] A. Salmon,et al. Phase behavior of mixtures of DPPC and POPG. , 1993, Biochimica et biophysica acta.
[7] T. Darden,et al. Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems , 1993 .
[8] K Schulten,et al. VMD: visual molecular dynamics. , 1996, Journal of molecular graphics.
[9] Berk Hess,et al. LINCS: A linear constraint solver for molecular simulations , 1997, J. Comput. Chem..
[10] O. Berger,et al. Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature. , 1997, Biophysical journal.
[11] D. Harrison,et al. The mechanism of islet amyloid polypeptide toxicity is membrane disruption by intermediate-sized toxic amyloid particles. , 1999, Diabetes.
[12] B. Ahrén,et al. Islet amyloid and type 2 diabetes mellitus. , 2000, The New England journal of medicine.
[13] Berk Hess,et al. GROMACS 3.0: a package for molecular simulation and trajectory analysis , 2001 .
[14] D. Selkoe. Folding proteins in fatal ways , 2003, Nature.
[15] M. Patra,et al. Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions. , 2003, Biophysical journal.
[16] A. Miranker,et al. Phospholipid catalysis of diabetic amyloid assembly. , 2004, Journal of molecular biology.
[17] S. Jayasinghe,et al. Lipid membranes modulate the structure of islet amyloid polypeptide. , 2005, Biochemistry.
[18] Ian Parker,et al. Calcium Dysregulation and Membrane Disruption as a Ubiquitous Neurotoxic Mechanism of Soluble Amyloid Oligomers*♦ , 2005, Journal of Biological Chemistry.
[19] Maarten F. M. Engel,et al. Islet amyloid polypeptide inserts into phospholipid monolayers as monomer. , 2006, Journal of molecular biology.
[20] D. Elmore. Molecular dynamics simulation of a phosphatidylglycerol membrane , 2006, FEBS letters.
[21] C. Dobson,et al. Protein misfolding, functional amyloid, and human disease. , 2006, Annual review of biochemistry.
[22] A. Miranker,et al. Conserved and cooperative assembly of membrane-bound alpha-helical states of islet amyloid polypeptide. , 2006, Biochemistry.
[23] F. Ferrone. Nucleation: the connections between equilibrium and kinetic behavior. , 2006, Methods in enzymology.
[24] Andrew D. Miranker,et al. Direct detection of transient α‐helical states in islet amyloid polypeptide , 2007 .
[25] Bert L. de Groot,et al. Acyl chain order parameter profiles in phospholipid bilayers: computation from molecular dynamics simulations and comparison with 2H NMR experiments , 2007, European Biophysics Journal.
[26] S. Jayasinghe,et al. Membrane interaction of islet amyloid polypeptide. , 2007, Biochimica et biophysica acta.
[27] A. Meister,et al. Mechanism of islet amyloid polypeptide fibrillation at lipid interfaces studied by infrared reflection absorption spectroscopy. , 2007, Biophysical journal.
[28] A. Miranker,et al. Direct detection of transient alpha-helical states in islet amyloid polypeptide. , 2007, Protein science : a publication of the Protein Society.
[29] Gerard J A Kroon,et al. Amylin proprotein processing generates progressively more amyloidogenic peptides that initially sample the helical state. , 2008, Biochemistry.
[30] S. Jayasinghe,et al. Structure of α-Helical Membrane-bound Human Islet Amyloid Polypeptide and Its Implications for Membrane-mediated Misfolding* , 2008, Journal of Biological Chemistry.
[31] Maarten F. M. Engel,et al. Membrane damage by human islet amyloid polypeptide through fibril growth at the membrane , 2008, Proceedings of the National Academy of Sciences.
[32] J. Brender,et al. Amyloid fiber formation and membrane disruption are separate processes localized in two distinct regions of IAPP, the type-2-diabetes-related peptide. , 2008, Journal of the American Chemical Society.
[33] Weixin Xu,et al. Amyloidogenesis Abolished by Proline Substitutions but Enhanced by Lipid Binding , 2009, PLoS Comput. Biol..
[34] Guanghong Wei,et al. Structural diversity of the soluble trimers of the human amylin(20-29) peptide revealed by molecular dynamics simulations. , 2009, The Journal of chemical physics.
[35] D. Raleigh,et al. A role for helical intermediates in amyloid formation by natively unfolded polypeptides? , 2009, Physical biology.
[36] J. Hofrichter,et al. Evidence for a partially structured state of the amylin monomer. , 2009, Biophysical journal.
[37] I. Tolokh,et al. Binding free energy and counterion release for adsorption of the antimicrobial peptide lactoferricin B on a POPG membrane. , 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.
[38] Y. Mu,et al. Assembly dynamics of two-beta sheets revealed by molecular dynamics simulations. , 2009, The Journal of chemical physics.
[39] A. Miranker,et al. Helix stabilization precedes aqueous and bilayer-catalyzed fiber formation in islet amyloid polypeptide. , 2009, Journal of molecular biology.
[40] A. Miranker,et al. The interplay of catalysis and toxicity by amyloid intermediates on lipid bilayers: insights from type II diabetes. , 2009, Annual review of biophysics.
[41] Maarten F. M. Engel. Membrane permeabilization by Islet Amyloid Polypeptide. , 2009, Chemistry and physics of lipids.
[42] R. Seidel,et al. Amyloidogenic propensities and conformational properties of ProIAPP and IAPP in the presence of lipid bilayer membranes. , 2009, Journal of molecular biology.
[43] S. Bhattacharjee,et al. Interaction of an antimicrobial peptide with a model lipid bilayer using molecular dynamics simulation. , 2009, Langmuir : the ACS journal of surfaces and colloids.
[44] D. Milardi,et al. Are fibril growth and membrane damage linked processes? An experimental and computational study of IAPP12–18 and IAPP21–27 peptides , 2010 .
[45] H. Lashuel,et al. Amyloidogenic protein-membrane interactions: mechanistic insight from model systems. , 2010, Angewandte Chemie.
[46] H. Reber,et al. Evidence for proteotoxicity in beta cells in type 2 diabetes: toxic islet amyloid polypeptide oligomers form intracellularly in the secretory pathway. , 2010, The American journal of pathology.
[47] Guanghong Wei,et al. Effect of the disulfide bond on the monomeric structure of human amylin studied by combined Hamiltonian and temperature replica exchange molecular dynamics simulations. , 2010, The journal of physical chemistry. B.
[48] Guanghong Wei,et al. Interactions of Aβ25-35 β-barrel-like oligomers with anionic lipid bilayer and resulting membrane leakage: an all-atom molecular dynamics study. , 2011, The journal of physical chemistry. B.
[49] Joan-Emma Shea,et al. The amyloid formation mechanism in human IAPP: dimers have β-strand monomer-monomer interfaces. , 2011, Journal of the American Chemical Society.
[50] Normand Mousseau,et al. Structure and thermodynamics of amylin dimer studied by Hamiltonian-temperature replica exchange molecular dynamics simulations. , 2011, The journal of physical chemistry. B.
[51] Per Westermark,et al. Islet amyloid polypeptide, islet amyloid, and diabetes mellitus. , 2011, Physiological reviews.
[52] C. Mukhopadhyay,et al. Molecular dynamics simulations of the interactions of kinin peptides with an anionic POPG bilayer. , 2011, Langmuir : the ACS journal of surfaces and colloids.
[53] Ayyalusamy Ramamoorthy,et al. Structure and membrane orientation of IAPP in its natively amidated form at physiological pH in a membrane environment. , 2011, Biochimica et biophysica acta.
[54] Roland Winter,et al. Comparing the structural properties of human and rat islet amyloid polypeptide by MD computer simulations. , 2011, Biophysical chemistry.
[55] Florentina Tofoleanu,et al. Molecular interactions of Alzheimer's Aβ protofilaments with lipid membranes. , 2012, Journal of molecular biology.
[56] Ruth Nussinov,et al. Probing ion channel activity of human islet amyloid polypeptide (amylin). , 2012, Biochimica et biophysica acta.
[57] Guanghong Wei,et al. Lipid Interaction and Membrane Perturbation of Human Islet Amyloid Polypeptide Monomer and Dimer by Molecular Dynamics Simulations , 2012, PloS one.
[58] Ayyalusamy Ramamoorthy,et al. Membrane disruption and early events in the aggregation of the diabetes related peptide IAPP from a molecular perspective. , 2012, Accounts of chemical research.
[59] Shuanghong Huo,et al. Conformations of Islet Amyloid Polypeptide Monomers in a Membrane Environment: Implications for Fibril Formation , 2012, PloS one.
[60] Jie Zheng,et al. Cholesterol promotes the interaction of Alzheimer β-amyloid monomer with lipid bilayer. , 2012, Journal of molecular biology.