DFT/TD-DFT calculations on the sensing mechanism of a dual response near-infrared fluorescent chemosensor for superoxide anion and hydrogen polysulfides: photoinduced electron transfer

Previous studies have shown that intracellular O2˙−/H2Sn are related to cytoprotection processes. In order to detect these two important species spontaneously, a sensitive chemosensor HCy-FN has been developed. In the present study, the sensing mechanisms of the fluorescent chemosensor HCy-FN, its oxidation product Cy-FN and the elimination product Keto-Cy have been investigated in detail using density functional theory (DFT) and time-dependent density functional theory (TD-DFT) methods. The present theoretical study indicates that there are intramolecular charge transfer (ICT) states in HCy-FN and Cy-FN, and they are energetically beneath the bright state, which is responsible for the photoinduced electron transfer (PET) process resulting in the fluorescence quenching. Whereas, Keto-Cy emits strong fluorescence because of the absence of PET. The calculated vertical excitation energies agree well with the experimental values and the calculation results can deeply explain the observed experimental phenomena.

[1]  T. Chu,et al.  Reversibly monitoring oxidation and reduction events in living biological systems: Recent development of redox-responsive reversible NIR biosensors and their applications in in vitro/in vivo fluorescence imaging. , 2016, Biosensors & bioelectronics.

[2]  S. M. Basheer,et al.  TD-DFT study on the fluoride and copper ion sensing mechanism of pyrene N(4) phenyl thiosemicarbazone , 2016 .

[3]  Shijun Shao,et al.  A BODIPY-based turn-on fluorescent probe for the selective detection of hydrogen sulfide in solution and in cells. , 2015, Talanta.

[4]  Lingxin Chen,et al.  A dual response near-infrared fluorescent probe for hydrogen polysulfides and superoxide anion detection in cells and in vivo. , 2015, Biomaterials.

[5]  Jinfeng Zhao,et al.  Theoretical Investigation on ESIPT Process of 3-(1,3-benzothiazol-2-yl)-2-hydroxynaphthalene-1-carbaldehyde Chemosensor Between Polar and Non-polar Solvent , 2015 .

[6]  Peng Li,et al.  Redox-Responsive Fluorescent Probes with Different Design Strategies. , 2015, Accounts of chemical research.

[7]  N. Besley,et al.  Density functional theory based analysis of photoinduced electron transfer in a triazacryptand based K⁺ sensor. , 2015, The journal of physical chemistry. A.

[8]  Shu-Pao Wu,et al.  Heterocyclic ring based colorimetric and fluorescent chemosensor for transition metal ions in an aqueous medium , 2015 .

[9]  P. Coutinho,et al.  Benzothienoquinolines: New one-pot synthesis and fluorescence studies of their interaction with DNA and polynucleotides , 2014 .

[10]  S. S. Yadav,et al.  Selective naked-eye detection of Hg²⁺ through an efficient turn-on photoinduced electron transfer fluorescent probe and its real applications. , 2014, Analytical chemistry.

[11]  Michael D. Pluth,et al.  Understanding Hydrogen Sulfide Storage: Probing Conditions for Sulfide Release from Hydrodisulfides , 2014, Journal of the American Chemical Society.

[12]  G. Shankarling,et al.  Quinoline-based chemosensor for fluoride and acetate: A combined experimental and DFT study , 2014 .

[13]  Henrik H. Jensen,et al.  Aarhus sensor green: a fluorescent probe for singlet oxygen. , 2014, The Journal of organic chemistry.

[14]  T. Mak,et al.  Modulation of oxidative stress as an anticancer strategy , 2013, Nature Reviews Drug Discovery.

[15]  Jacob M. Goldberg,et al.  Thioamide quenching of fluorescent probes through photoinduced electron transfer: mechanistic studies and applications. , 2013, Journal of the American Chemical Society.

[16]  D. Becher,et al.  Polysulfides link H2S to protein thiol oxidation. , 2013, Antioxidants & redox signaling.

[17]  Hee-Seung Lee,et al.  Role of fluorophore-metal interaction in photoinduced electron transfer (PET) sensors: time-dependent density functional theory (TDDFT) study. , 2013, The journal of physical chemistry. A.

[18]  A. Fu,et al.  Sensing mechanism for a fluoride chemosensor: invalidity of excited-state proton transfer mechanism. , 2013, Physical chemistry chemical physics : PCCP.

[19]  Y. Kimura,et al.  Polysulfides are possible H2S‐derived signaling molecules in rat brain , 2013, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[20]  Peng Li,et al.  Reversible near-infrared fluorescent probe introducing tellurium to mimetic glutathione peroxidase for monitoring the redox cycles between peroxynitrite and glutathione in vivo. , 2013, Journal of the American Chemical Society.

[21]  M. Hundal,et al.  Selective recognition of fluoride ions through fluorimetric and colorimetric response of a first mesitylene based dipodal sensor 15employing thiosemicarbazones , 2013 .

[22]  C. Nathan,et al.  Beyond oxidative stress: an immunologist's guide to reactive oxygen species , 2013, Nature Reviews Immunology.

[23]  Guoping Li,et al.  A strategy for highly selective detection and imaging of hypochlorite using selenoxide elimination. , 2013, Organic letters.

[24]  R. K. Bera,et al.  Spectroscopic and Computational Study of a Naphthalene Derivative as Colorimetric and Fluorescent Sensor for Bioactive Anions , 2013, Journal of Fluorescence.

[25]  Ji-Kang Feng,et al.  A Theoretical Investigation of Two Typical Two‐Photon pH Fluorescent Probes , 2013, Photochemistry and photobiology.

[26]  Banchob Wanno,et al.  Fluorescent sensors based on BODIPY derivatives for aluminium ion recognition: an experimental and theoretical study , 2013, Journal of Molecular Modeling.

[27]  P. Li,et al.  A reversible fluorescent probe for detecting hypochloric acid in living cells and animals: utilizing a novel strategy for effectively modulating the fluorescence of selenide and selenoxide. , 2013, Chemical communications.

[28]  Shu-Pao Wu,et al.  Hypochlorous acid turn-on fluorescent probe based on oxidation of diphenyl selenide. , 2013, Organic letters.

[29]  Keli Han,et al.  A reversible fluorescence probe based on Se-BODIPY for the redox cycle between HClO oxidative stress and H2S repair in living cells. , 2013, Chemical communications.

[30]  Tianshu Chu,et al.  TD-DFT study on the excited-state proton transfer in the fluoride sensing of a turn-off type fluorescent chemosensor based on anthracene derivatives. , 2012, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

[31]  Jian Wang,et al.  Theoretical studies on spectroscopic properties of ruthenium sensitizers absorbed to TiO2 film surface with connection mode for DSSC , 2012 .

[32]  Jahan B. Ghasemi,et al.  A new polymerizable fluorescent PET chemosensor of fluoride (F-) based on naphthalimide-thiourea dye. , 2012, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

[33]  J. Qin,et al.  A new "turn-on" naphthalenedimide-based chemosensor for mercury ions with high selectivity: successful utilization of the mechanism of twisted intramolecular charge transfer, near-IR fluorescence, and cell images. , 2012, Organic letters.

[34]  Keli Han,et al.  Hydrogen bonding in the electronic excited state. , 2012, Accounts of chemical research.

[35]  Tian Lu,et al.  Multiwfn: A multifunctional wavefunction analyzer , 2012, J. Comput. Chem..

[36]  P. Ashokkumar,et al.  Photoinduced electron transfer (PET) based Zn2+ fluorescent probe: transformation of turn-on sensors into ratiometric ones with dual emission in acetonitrile. , 2011, The journal of physical chemistry. A.

[37]  Tianshu Chu,et al.  TD-DFT study on fluoride-sensing mechanism of 2-(2'-phenylureaphenyl)benzoxazole: the way to inhibit the ESIPT process. , 2011, Physical chemistry chemical physics : PCCP.

[38]  Juyoung Yoon,et al.  Fluorescent and luminescent probes for detection of reactive oxygen and nitrogen species. , 2011, Chemical Society reviews.

[39]  P. Li,et al.  A near-IR reversible fluorescent probe modulated by selenium for monitoring peroxynitrite and imaging in living cells. , 2011, Journal of the American Chemical Society.

[40]  B. Tang,et al.  A selective near-infrared fluorescent probe for singlet oxygen in living cells. , 2011, Chemical communications.

[41]  Pengfei Wang,et al.  New sensing mechanisms for design of fluorescent chemosensors emerging in recent years. , 2011, Chemical Society reviews.

[42]  J. Toohey Sulfur signaling: is the agent sulfide or sulfane? , 2011, Analytical biochemistry.

[43]  Y. Urano,et al.  Evolution of group 14 rhodamines as platforms for near-infrared fluorescence probes utilizing photoinduced electron transfer. , 2011, ACS chemical biology.

[44]  P. Chou,et al.  Comprehensive studies on an overall proton transfer cycle of the ortho-green fluorescent protein chromophore. , 2011, Journal of the American Chemical Society.

[45]  C. Winterbourn,et al.  Rapid reaction of hydrogen sulfide with the neutrophil oxidant hypochlorous acid to generate polysulfides. , 2010, Chemical research in toxicology.

[46]  T. Van Voorhis,et al.  Fluorescence quenching by photoinduced electron transfer in the Zn2+ sensor zinpyr-1: a computational investigation. , 2010, The journal of physical chemistry. A.

[47]  Zhihai Liu,et al.  Evaluation of the performance of four molecular docking programs on a diverse set of protein‐ligand complexes , 2010, J. Comput. Chem..

[48]  Guang-Yue Li,et al.  TD‐DFT study on the sensing mechanism of a fluorescent chemosensor for fluoride: Excited‐state proton transfer , 2010, J. Comput. Chem..

[49]  X. You,et al.  Experimentation and theoretic calculation of a BODIPY sensor based on photoinduced electron transfer for ions detection. , 2009, The journal of physical chemistry. A.

[50]  Sören Doose,et al.  Fluorescence quenching by photoinduced electron transfer: a reporter for conformational dynamics of macromolecules. , 2009, Chemphyschem : a European journal of chemical physics and physical chemistry.

[51]  Shasha Liu,et al.  3,6-Disubstituted carbazole-based bisboronic acids with unusual fluorescence transduction as enantioselective fluorescent chemosensors for tartaric acid. , 2009, The Journal of organic chemistry.

[52]  Guang-Jiu Zhao,et al.  Site-selective photoinduced electron transfer from alcoholic solvents to the chromophore facilitated by hydrogen bonding: a new fluorescence quenching mechanism. , 2007, The journal of physical chemistry. B.

[53]  Y. Eichen,et al.  Sensitive and selective PET-based diimidazole luminophore for Zn(II) ions: a structure-activity correlation. , 2006, Inorganic chemistry.

[54]  H. Fidder,et al.  The role of large conformational changes in efficient ultrafast internal conversion: deviations from the energy gap law. , 2004, Journal of the American Chemical Society.

[55]  Yasuteru Urano,et al.  Rational design principle for modulating fluorescence properties of fluorescein-based probes by photoinduced electron transfer. , 2003, Journal of the American Chemical Society.

[56]  Giovanni Scalmani,et al.  Energies, structures, and electronic properties of molecules in solution with the C‐PCM solvation model , 2003, J. Comput. Chem..

[57]  A. Klamt,et al.  Fast solvent screening via quantum chemistry: COSMO‐RS approach , 2002 .

[58]  B. Ames,et al.  The free radical theory of aging matures. , 1998, Physiological reviews.

[59]  A. Schäfer,et al.  Fully optimized contracted Gaussian basis sets of triple zeta valence quality for atoms Li to Kr , 1994 .

[60]  A. Becke Density-functional thermochemistry. III. The role of exact exchange , 1993 .

[61]  Hans W. Horn,et al.  Fully optimized contracted Gaussian basis sets for atoms Li to Kr , 1992 .

[62]  Hermann Stoll,et al.  Results obtained with the correlation energy density functionals of becke and Lee, Yang and Parr , 1989 .

[63]  A. Becke,et al.  Density-functional exchange-energy approximation with correct asymptotic behavior. , 1988, Physical review. A, General physics.

[64]  Parr,et al.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.

[65]  Li Zhao,et al.  A DFT/TDDFT study of the excited state intramolecular proton transfer based sensing mechanism for the aqueous fluoride chemosensor BTTPB , 2014 .

[66]  Junsheng Chen,et al.  Intramolecular charge transfer and sensing mechanism for a colorimetric fluoride sensor based on 1,8-naphthalimide derivatives , 2013, Theoretical Chemistry Accounts.

[67]  R. Ahlrichs,et al.  Efficient molecular numerical integration schemes , 1995 .

[68]  A. Klamt,et al.  COSMO : a new approach to dielectric screening in solvents with explicit expressions for the screening energy and its gradient , 1993 .

[69]  Michael Kasha,et al.  Characterization of electronic transitions in complex molecules , 1950 .