Control and pH dependence of ligand binding to heme proteins.

The recombination after flash photolysis of dioxygen and carbon monoxide with sperm whale myoglobin (Mb), and separated beta chains of human hemoglobin (beta A) and hemoglobin Zürich (beta ZH), has been studied as a function of pH and temperature from 300 to 60 K. At physiological temperatures, a preequilibrium is established between the ligand molecules in the solvent and in the heme pocket. The ligand in the pocket binds to the heme iron by overcoming a barrier at the heme. The association rate is controlled by this final binding step. The association rate of CO to Mb and beta A is modulated by a single titratable group with a pK at 300 K of 5.7. The binding of CO to beta ZH, in which the distal histidine is replaced by arginine, does not depend on pH. Oxygen recombination is independent of pH in all three proteins. Comparison of the binding of CO at 300 K and at low temperatures shows that pH does not affect the preequilibrium but changes the barrier height at the heme. The pH dependence and the difference between O2 and CO binding can be explained by a charge-dipole interaction between the distal histidine and CO.

[1]  A. Rich,et al.  X-ray crystallographic study of the quaternary structure of canavalin. , 1973, Journal of biochemistry.

[2]  S. F. Bowne,et al.  Isotope Effect in Molecular Tunneling , 1980 .

[3]  J. Olson,et al.  Effects of solvent composition and viscosity on the rates of CO binding to heme proteins. , 1981, Journal of Biological Chemistry.

[4]  H. Frauenfelder,et al.  Tunneling in ligand binding to heme proteins. , 1976, Science.

[5]  H Frauenfelder,et al.  Dynamics of ligand binding to myoglobin. , 1975, Biochemistry.

[6]  H. Yamada,et al.  Heme-linked proton dissociation of carbon monoxide complexes of myoglobin and peroxidase. , 1976, Biochimica et biophysica acta.

[7]  W. Caughey CARBON MONOXIDE BONDING IN HEMEPROTEINS * , 1970, Annals of the New York Academy of Sciences.

[8]  M. Ikeda-Saito,et al.  Studies on cobalt myoglobins and hemoglobins, XIII. A consequence of the occurrence of glutamine at the E7 (58) site of alpha subunits in opossum hemoglobin. , 1980, Journal of molecular biology.

[9]  H. Frauenfelder,et al.  Transient analyzer with logarithmic time base , 1976 .

[10]  K. Gersonde,et al.  Acid Bohr effects in myoglobin characterized by proton NMR hyperfine shifts and oxygen binding studies. , 1978, Biochimica et biophysica acta.

[11]  R. Berger,et al.  REACTION OF OXYHEMOGLOBIN WITH CARBON MONOXIDE. , 1963, Biophysical journal.

[12]  J. I. Brauman,et al.  Carbon monoxide binding to iron porphyrins. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[13]  A. Szabó,et al.  Kinetics of hemoglobin and transition state theory. , 1978, Proceedings of the National Academy of Sciences of the United States of America.

[14]  H Frauenfelder,et al.  Solvent viscosity and protein dynamics. , 1980, Biochemistry.

[15]  P. Ohlsson,et al.  Infrared spectroscopic studies of carbonyl horseradish peroxidases. , 1976, Biochemistry.

[16]  V. Dovi',et al.  Direct analysis of continuous relaxation spectra. , 1979, Journal of biochemical and biophysical methods.

[17]  A. Warshel,et al.  Energy-structure correlation in metalloporphyrins and the control of oxygen binding by hemoglobin. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[18]  M. Perutz,et al.  Structure of horse carbonmonoxyhaemoglobin. , 1976, Journal of molecular biology.

[19]  J. D. Mcdonald,et al.  Infrared spectroscopy of photodissociated carboxymyoglobin at low temperatures. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[20]  Q. Gibson,et al.  The role of diffusion in limiting the rate of ligand binding to hemoglobin. , 1980, The Journal of biological chemistry.

[21]  M. Brunori,et al.  Binding of carbon monoxide to hemoglobin Zürich. Proposal for a kinetic model. , 1977, European journal of biochemistry.

[22]  J. Richards,et al.  Spectroscopic studies of the nature of ligand bonding in carbonmonoxyhemoglobins: evidence of a specific function for histidine-E7 from infrared and nuclear magnetic resonance intensities. , 1978, Biochemistry.

[23]  M. Perutz,et al.  Binding of carbon monoxide to isolated hemoglobin chains. , 1978, Biochemistry.

[24]  M. Brunori,et al.  The reaction of hemoglobin Zürich with oxygen and carbon monoxide. , 1980, The Journal of biological chemistry.

[25]  Teddy G. Traylor,et al.  Synthetic model compounds for hemoproteins , 1981 .

[26]  M. Karplus,et al.  Dynamics of ligand binding to heme proteins. , 1979, Journal of molecular biology.

[27]  M. Brunori,et al.  Functional properties of hemoglobin Zürich. , 1969, European journal of biochemistry.

[28]  S. Phillips Structure of Deoxyhaemoglobin Z?rich (HisE7(63?) ? > Arg) , 1981 .

[29]  J. Baldwin,et al.  The structure of human carbonmonoxy haemoglobin at 2.7 A resolution. , 1980, Journal of molecular biology.

[30]  A. McPherson,et al.  Preliminary structure analysis of canavalin from jack bean. , 1975, Archives of biochemistry and biophysics.

[31]  S. Phillips,et al.  Structure and refinement of oxymyoglobin at 1.6 A resolution. , 1980, Journal of molecular biology.

[32]  H. Frauenfelder,et al.  Dynamics of carbon monoxide binding to protoheme , 1976 .

[33]  J. Geibel,et al.  "Tension" on heme by the proximal base and ligand reactivity: conclusions drawn from model compounds for the reaction of hemoglobin. , 1978, Proceedings of the National Academy of Sciences of the United States of America.

[34]  C. Appleby,et al.  CO and O2 complexes of soybean leghemoglobins: pH effects upon infrared and visible spectra. Comparisons with CO and O2 complexes of myoglobin and hemoglobin. , 1979, Biochemistry.

[35]  Y. Yip,et al.  Influence of prosthetic groups on protein folding and subunit assembly. I. Conformational differences between separated human alpha- and beta- globins. , 1972, The Journal of biological chemistry.

[36]  Hans Frauenfelder,et al.  Temperature-dependent X-ray diffraction as a probe of protein structural dynamics , 1979, Nature.

[37]  S. Boyer,et al.  Differences in the infrared stretching frequency of carbon monoxide bound to abnormal hemoglobins. , 1969, Biochemistry.

[38]  Benno P. Schoenborn,et al.  Neutron diffraction reveals oxygen–histidine hydrogen bond in oxymyoglobin , 1981, Nature.

[39]  W. Caughey,et al.  Dynamic protein structures: infrared evidence for four discrete rapidly interconverting conformers at the carbon monoxide binding site of bovine heart myoglobin. , 1981, Proceedings of the National Academy of Sciences of the United States of America.

[40]  J. Kendrew,et al.  THE MODE OF ATTACHMENT OF THE AZIDE ION TO SPERM WHALE METMYOGLOBIN. , 1964, Journal of molecular biology.

[41]  A. C. Nunes,et al.  Neutron diffraction analysis of myoglobin: structure of the carbon monoxide derivative , 1975, Science.

[42]  Q. Gibson,et al.  Preparation and Properties of α- and β-Chains from Human Hemoglobin , 1969 .