Sparse linear regression with elastic net regularization for brain-computer interfaces

This paper demonstrates the feasibility of decoding neuronal population signals using a sparse linear regression model with an elastic net penalty. In offline analysis of real electrocorticographic (ECoG) neural data the elastic net achieved a timepoint decoding accuracy of 95% for classifying hand grasps vs. rest, and 82% for moving a cursor in 1-D space towards a target. These results were superior to those obtained using ℓ2-penalized and unpenalized linear regression, and marginally better than ℓ1-penalized regression. Elastic net and the ℓ1-penalty also produced sparse feature sets, but the elastic net did not eliminate correlated features, which could result in a more stable decoder for brain-computer interfaces.

[1]  T. Hesterberg,et al.  Least angle and ℓ1 penalized regression: A review , 2008, 0802.0964.

[2]  N. Birbaumer,et al.  BCI2000: a general-purpose brain-computer interface (BCI) system , 2004, IEEE Transactions on Biomedical Engineering.

[3]  G. Pfurtscheller,et al.  Brain-Computer Interfaces for Communication and Control. , 2011, Communications of the ACM.

[4]  Rabab K Ward,et al.  A survey of signal processing algorithms in brain–computer interfaces based on electrical brain signals , 2007, Journal of neural engineering.

[5]  R. Tibshirani Regression Shrinkage and Selection via the Lasso , 1996 .

[6]  Kaustubh Supekar,et al.  Sparse logistic regression for whole-brain classification of fMRI data , 2010, NeuroImage.

[7]  Trevor Hastie,et al.  Regularization Paths for Generalized Linear Models via Coordinate Descent. , 2010, Journal of statistical software.

[8]  Monica A. Perez,et al.  Neural interface technology for rehabilitation: exploiting and promoting neuroplasticity. , 2010, Physical medicine and rehabilitation clinics of North America.

[9]  A. Ravishankar Rao,et al.  Prediction and interpretation of distributed neural activity with sparse models , 2009, NeuroImage.

[10]  Trevor Hastie,et al.  Regularization Paths for Cox's Proportional Hazards Model via Coordinate Descent. , 2011, Journal of statistical software.

[11]  D J Weber,et al.  Human motor cortical activity recorded with Micro-ECoG electrodes, during individual finger movements , 2009, 2009 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[12]  Adam G. Rouse,et al.  Neural adaptation of epidural electrocorticographic (EECoG) signals during closed-loop brain computer interface (BCI) tasks , 2009, 2009 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[13]  Jennifer L. Collinger,et al.  Craniux: A LabVIEW-Based Modular Software Framework for Brain-Machine Interface Research , 2011, Comput. Intell. Neurosci..