Increasing precision of lifetime determination in fluorescence lifetime imaging

The interest in fluorescence lifetime imaging microscopy (FLIM) is increasing, as commercial FLIM modules become available for confocal and multi-photon microscopy. In biological FLIM applications, low fluorescence signals from samples can be a challenge, and this causes poor precision in lifetime. In this study, for the first time, we applied wavelet-based denoising methods in time-domain FLIM, and compared them with our previously developed total variation (TV) denoising methods. They were first tested using artificial FLIM images. We then applied them to lowlight live-cell images. The results demonstrated that our TV methods could improve lifetime precision multi-fold in FLIM images and preserve the overall lifetime and pre-exponential term values when improving local lifetime fitting, while wavelet-based methods were faster. The results here can enhance the precision of FLIM, especially for low-light and / or fast video-rate imaging, to improve current and rapidly emerging new applications of FLIM such as live-cell, in vivo whole-animal, or endoscopic imaging.

[1]  Mary Ann Mycek,et al.  A UV fluorescence lifetime imaging microscope to probe endogenous cellular fluorescence , 2002, CLEO 2002.

[2]  David M. Coleman,et al.  A Two-Dimensional Fluorescence Lifetime Imaging System Using a Gated Image Intensifier , 1991 .

[3]  Mary-Ann Mycek,et al.  Image restoration for fluorescence lifetime imaging microscopy (FLIM). , 2008, Optics express.

[4]  Paul Urayama,et al.  A UV–Visible–NIR fluorescence lifetime imaging microscope for laser-based biological sensing with picosecond resolution , 2003 .

[5]  Ching-Wei Chang,et al.  Improving Accuracy and Precision in Biological Applications of Fluorescence Lifetime Imaging Microscopy. , 2009 .

[6]  Mary-Ann Mycek,et al.  Calibration and validation of an optical sensor for intracellular oxygen measurements. , 2009, Journal of biomedical optics.

[7]  Chittanon Buranachai,et al.  Rapid Frequency-Domain FLIM Spinning Disk Confocal Microscope: Lifetime Resolution, Image Improvement and Wavelet Analysis , 2008, Journal of Fluorescence.

[8]  Paul Urayama,et al.  Imaging fluorescence lifetime modulation of a ruthenium-based dye in living cells: the potential for oxygen sensing , 2003 .

[9]  C. Vonesch Fast and automated wavelet-regularized image restoration in fluorescence microscopy , 2009 .

[10]  Antonin Chambolle,et al.  Total Variation Minimization and a Class of Binary MRF Models , 2005, EMMCVPR.

[11]  E. V. van Munster,et al.  Fluorescence lifetime imaging microscopy (FLIM). , 2005, Advances in biochemical engineering/biotechnology.

[12]  Ching-Wei Chang,et al.  Picosecond-resolution fluorescence lifetime imaging microscopy: a useful tool for sensing molecular interactions in vivo via FRET. , 2007, Optics express.

[13]  M. Mycek,et al.  Fluorescence lifetime imaging microscopy. , 2007, Methods in cell biology.

[14]  Mary-Ann Mycek,et al.  Time-resolved optical imaging provides a molecular snapshot of altered metabolic function in living human cancer cell models. , 2006, Optics express.

[15]  José M. Bioucas-Dias,et al.  Denoising of medical images corrupted by Poisson noise , 2008, 2008 15th IEEE International Conference on Image Processing.

[16]  Ching-Wei Chang,et al.  Physiological fluorescence lifetime imaging microscopy improves Förster resonance energy transfer detection in living cells. , 2009, Journal of biomedical optics.

[17]  Robert D. Nowak,et al.  On Total Variation Denoising: A New Majorization-Minimization Algorithm and an Experimental Comparisonwith Wavalet Denoising , 2006, 2006 International Conference on Image Processing.

[18]  Kristin K. Sharman,et al.  Error analysis of the rapid lifetime determination method for double-exponential decays and new windowing schemes. , 1999, Analytical chemistry.

[19]  Mary Ann Mycek,et al.  Improving precision in time-gated FLIM for low-light live-cell imaging , 2009, European Conference on Biomedical Optics.

[20]  Shuichi Takayama,et al.  Optical imaging in microfluidic bioreactors enables oxygen monitoring for continuous cell culture. , 2006, Journal of biomedical optics.

[21]  Robert D. Nowak,et al.  Fast multiresolution photon-limited image reconstruction , 2004, 2004 2nd IEEE International Symposium on Biomedical Imaging: Nano to Macro (IEEE Cat No. 04EX821).

[22]  Jean-Michel Morel,et al.  A Review of Image Denoising Algorithms, with a New One , 2005, Multiscale Model. Simul..

[23]  Paul Urayama,et al.  Fluorescence Lifetime Imaging Microscopy of Endogenous Biological Fluorescence , 2003 .