InSTREAM: the individual-based stream trout research and environmental assessment model
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Steven F. Railsback | Bret C. Harvey | Roland H. Lamberson | S. Railsback | B. Harvey | R. Lamberson | Stephen K. Jackson
[1] W. Van Winkle,et al. An individual-based instream flow model for coexisting populations of brown and rainbow trout , 1996 .
[2] B. L. Lamb,et al. Stream habitat analysis using the instream flow incremental methodology , 1998 .
[3] S. Railsback,et al. A Strategy for Parameter Sensitivity and Uncertainty 1 Analysis of Individual-based Models , 2006 .
[4] M. Mitchell Waldrop,et al. Complexity : the emerging science and the edge of order and chaos , 1992 .
[5] E. R. Keeley,et al. Prey size of salmonid fishes in streams, lakes, and oceans , 2001 .
[6] L. Brown,et al. Influence of Temperature on Microhabitat Choice by Fishes in a California Stream , 1987 .
[7] Neil H. C. Fraser,et al. The costs of becoming nocturnal: feeding efficiency in relation to light intensity in juvenile Atlantic Salmon , 1997 .
[8] Lawrence W. Barnthouse,et al. Science Law and Hudson River Power Plants: A Case Study in Environmental Impact Assessment , 1988 .
[9] Marc Mangel,et al. Seasonal matching of foraging to anticipated energy requirements in anorexic juvenile salmon , 1996, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[10] K. Fausch,et al. Why do Foraging Stream Salmonids Move During Summer? , 2002, Environmental Biology of Fishes.
[11] T. Essington,et al. Intra- and inter-specific competition and the reproductive success of sympatric Pacific salmon , 2000 .
[12] Jason L. White,et al. Influence of large woody debris and a bankfull flood on movement of adult resident coastal cutthroat trout (Oncorhynchus clarki) during fall and winter , 1999 .
[13] H. Preisler,et al. Is it possible to predict habitat use by spawning salmonids? A test using California golden trout (Oncorhynchus mykiss aguabonita) , 1999 .
[14] John A. Sweka,et al. Influence of Turbidity on Brook Trout Reactive Distance and Foraging Success , 2001 .
[15] Steven F. Railsback,et al. Concepts from complex adaptive systems as a framework for individual-based modelling , 2001 .
[16] A. M. Woodbury. Great Basin Naturalist , 1965 .
[17] K. Meyer,et al. Reproductive Demographics and Factors that Influence Length at Sexual Maturity of Yellowstone Cutthroat Trout in Idaho , 2003 .
[18] P. Moyle,et al. Microhabitat Use by an Assemblage of California Stream Fishes: Developing Criteria for Instream Flow Determinations , 1985 .
[19] S. Railsback,et al. Demonstration Flow Assessment : Judgment and Visual Observation in Instream Flow Studies , 2008 .
[20] P. Bednekoff. Models of Adaptive Behaviour: An Approach based on State , 2000, Animal Behaviour.
[21] Jennifer L. Hill,et al. An Energetic Model of Microhabitat Use for Rainbow Trout and Rosyside Dace , 1993 .
[22] R. N. Thut. Feeding Habits of the Dipper in Southwestern Washington , 1970 .
[23] R. M. Rice,et al. Modeling the Cumulative Watershed Effects of Forest Management Strategies , 1991 .
[24] K. Fausch,et al. Mobile brook trout in two high-elevation Colorado streams: Re-evaluating the concept of restricted movement , 1996 .
[25] J. M. Elliott,et al. Daily energy intake and growth of piscivorous brown trout,Salmo trutta , 2000 .
[26] F. Huntingford,et al. Seasonal changes in sheltering: effect of light and temperature on diel activity in juvenile salmon , 1997, Animal Behaviour.
[27] J. M. Elliott,et al. The effects of temperature and ration size on the growth and energetics of salmonids in captivity , 1982 .
[28] Derek E. Lee,et al. POPULATION‐LEVEL ANALYSIS AND VALIDATION OF AN INDIVIDUAL‐BASED CUTTHROAT TROUT MODEL , 2002 .
[29] G. Mathias Kondolf,et al. Some Suggested Guidelines for Geomorphic Aspects of Anadromous Salmonid Habitat Restoration Proposals , 2000 .
[30] John D. Stark,et al. Development and Test of a Whole-Lifetime Foraging and Bioenergetics Growth Model for Drift-Feeding Brown Trout , 2000 .
[31] L. Dill,et al. Food abundance and territory size in juvenile coho salmon (Oncorhynchus kisutch) , 1981 .
[32] J. Armstrong,et al. Movements of Atlantic salmon migrating upstream through a fish‐pass complex in Scotland , 2003 .
[33] John Pitlick,et al. Observations of Flow and Sediment Entrainment on a Large Gravel-Bed River , 1996 .
[34] B. Manly,et al. Resource selection by animals: statistical design and analysis for field studies. , 1994 .
[35] A. Hendry,et al. Adaptive variation in senescence: reproductive lifespan in a wild salmon population , 2004, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[36] R. Young,et al. Testing a model of drift-feeding using three- dimensional videography of wild brown trout, Salmo trutta, in a New Zealand river , 2003 .
[37] N. Metcalfe,et al. Is the level of aggression and dispersion in territorial fish dependent on light intensity? , 2001, Animal Behaviour.
[38] W. Hubert,et al. Interacting effects of water temperature and swimming activity on body composition and mortality of fasted juvenile rainbow trout , 2003 .
[39] William E. Magnusson,et al. Error bars: Are they the king's clothes , 2000 .
[40] Donald J. Orth,et al. ECOLOGICAL CONSIDERATIONS IN THE DEVELOPMENT AND APPLICATION OF INSTREAM FLOW-HABITAT MODELS , 1987 .
[41] M. Wilzbach,et al. Effect of Temperature and Macrohabitat on Interspecific Aggression, Foraging Success, and Growth of Brook Trout and Rainbow Trout Pairs in Laboratory Streams , 1998 .
[42] L. Brown,et al. Changes in Habitat and Microhabitat Partitioning within an Assemblage of Stream Fishes in Response to Predation by Sacramento Squawfish (Ptychocheilus grandis) , 1991 .
[43] Bret C. Harvey,et al. Individual-based Model Formulation for Cutthroat Trout, Little Jones Creek, California , 2001 .
[44] Fish physiology. Volume IX. Reproduction. Part B. Behavior and fertility control. , 1983 .
[45] A. Farrell,et al. The effect of temperature and acclimation period on repeat swimming performance in cutthroat trout , 2004 .
[46] J. Nielsen. Microhabitat‐Specific Foraging Behavior, Diet, and Growth of Juvenile Coho Salmon , 1992 .
[47] K. Fausch,et al. Profitable stream positions for salmonids: relating specific growth rate to net energy gain , 1984 .
[48] M. Bradford,et al. Habitat-, season-, and size-specific variation in diel activity patterns of juvenile chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) , 2001 .
[49] Simon A. Levin,et al. Fragile Dominion: Complexity and the Commons , 1999 .
[50] B. Collette,et al. Systematics, Historical Ecology, and North American Freshwater Fishes. , 1993 .
[51] Michael Sonnenschein,et al. Modelling and simulation software to support individual-based ecological modelling , 1999 .
[52] L. Lien. The energy budget of the brown trout population of ovre Heimdalsvatn , 1978 .
[53] J. Rinne,et al. Native trout of western North America , 1992, Reviews in Fish Biology and Fisheries.
[54] M. Power. Predator Avoidance by Grazing Fishes in Temperate and Tropical Streams : Importance of Stream Depth and Prey Size , 2009 .
[55] David A. Beauchamp,et al. Effects of light, prey size, and turbidity on reaction distances of lake trout (Salvelinus namaycush) to salmonid prey , 1999 .
[56] A. Huryn,et al. Multi-scale determinants of secondary production in Atlantic salmon (Salmo salar) streams , 1998 .
[57] C. Clark,et al. Dynamic State Variable Models in Ecology , 2000 .
[58] R. Nelson,et al. Evidence for variability in spawning behavior of interior cutthroat trout in response to environmental uncertainty , 1987 .
[59] Neil H. C. Fraser,et al. Temperature-dependent switch between diurnal and nocturnal foraging in salmon , 1993, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[60] J. Post,et al. Spatial and Temporal Variation in Risk to Piscivory of Age-0 Rainbow Trout: Patterns and Population Level Consequences , 1998 .
[61] Terry D. Prowse,et al. Atlantic salmon (Salmo salar) in winter: "the season of parr discontent"? , 1998 .
[62] R. Thurow,et al. Spatial Variation in Spawning Habitat of Cutthroat Trout in a Sediment-Rich Stream Basin , 1996 .
[63] Jason L. White,et al. Use of benthic prey by salmonids under turbid conditions in a laboratory stream , 2008 .
[64] Michael Power,et al. Quantitative Ecology and the Brown Trout , 1994 .
[65] W. Beer. Comparison of Mechanistic and Empirical Methods for Modeling Embryo and Alevin Development in Chinook Salmon , 1999 .
[66] D. Lodge,et al. Scenarios of freshwater fish extinctions from climate change and water withdrawal , 2005 .
[67] K. Nislow,et al. Food and foraging behavior in relation to microhabitat use and survival of age-0 Atlantic salmon , 1998 .
[68] Territorial competition among wild brown trout fry: effects of ownership and body size , 1999 .
[69] Matthew W. Jones,et al. INDIVIDUAL VARIATION IN ATLANTIC SALMON FERTILIZATION SUCCESS: IMPLICATIONS FOR EFFECTIVE POPULATION SIZE , 2002 .
[70] Karin Frank,et al. RANKING METAPOPULATION EXTINCTION RISK: FROM PATTERNS IN DATA TO CONSERVATION MANAGEMENT DECISIONS , 2003 .
[71] T. Foin,et al. Interactions between stochastic and deterministic processes in stream fish community assembly , 2004, Environmental Biology of Fishes.
[72] C. Levings,et al. Turbidity Reduces Predation on Migrating Juvenile Pacific Salmon , 1998 .
[73] Nelson Minar,et al. The Swarm Simulation System: A Toolkit for Building Multi-Agent Simulations , 1996 .
[74] R. White,et al. Effects of Complete Redd Dewatering on Salmonid Egg-Hatching Success and Development of Juveniles , 1983 .
[75] B. Harvey. Influence of large woody debris on retention, immigration, and growth of coastal cutthroat trout (Oncorhynchus clarki clarki) in stream pools , 1998 .
[76] Thomas P. Quinn,et al. Pacific Salmon Life Histories , 1992 .
[77] Stefano Tarantola,et al. Sensitivity Analysis in Practice: A Guide to Assessing Scientific Models , 2004 .
[78] Martin Drechsler. A model-based decision aid for species protection under uncertainty , 2000 .
[79] Steven F. Railsback,et al. ANALYSIS OF HABITAT‐SELECTION RULES USING ANINDIVIDUAL‐BASED MODEL , 2002 .
[80] W. V. Winkle,et al. Individual-based model of sympatric populations of brown and rainbow trout for instream flow assessment: model description and calibration , 1998 .
[81] P. Butler,et al. Interactive Effects of Seasonal Temperature and Low pH on Resting Oxygen Uptake and Swimming Performance of Adult Brown Trout Salmo Trutta , 1992 .
[82] Alsop,et al. The interactive effects of feeding and exercise on oxygen consumption, swimming performance and protein usage in juvenile rainbow trout (Oncorhynchus mykiss) , 1997, The Journal of experimental biology.
[83] T. Quinn,et al. Critical swimming velocity and associated morphology of juvenile coastal cutthroat trout (Oncorhynchus clarki clarki), steelhead trout (Oncorhynchus mykiss), and their hybrids , 1996 .
[84] Marc Mangel,et al. Modelling the proximate basis of salmonid life-history variation, with application to Atlantic salmon, Salmo salar L. , 2004, Evolutionary Ecology.
[85] A. Huusko,et al. Diet of brown trout in relation to variation in abundance and size of pelagic fish prey , 2006 .
[86] Michal L. Jones,et al. Modeling Steelhead Population Energetics in Lakes Michigan and Ontario , 1993 .
[87] Mark D. Bowen,et al. Habitat Selection and Movement of a Stream-Resident Salmonid in a Regulated River and Tests of Four Bioenergetic Optimization Models , 1996 .
[88] L. Margolis,et al. Pacific Salmon Life Histories , 1992 .
[89] D. F. Alderdice,et al. Effects of Acclimation and Acute Temperature Experience on the Swimming Speed of Juvenile Coho Salmon , 1972 .
[90] M. Wilzbach. Relative Roles of Food Abundance and Cover in Determining the Habitat Distribution of Stream-Dwelling Cutthroat Trout (Salmo clarki) , 1985 .
[91] Jason L. White,et al. Winter Feeding Success of Stream Trout under Different Streamflow and Turbidity Conditions , 2007 .
[92] G. L. Vinyard,et al. Lahontan cutthroat trout ( Oncorhynchus clarki henshawi ) spawning and downstream migration of juveniles into Summit Lake, Nevada , 2000 .
[93] Steven F. Railsback,et al. Bioenergetics Modeling of Stream Trout Growth: Temperature and Food Consumption Effects , 1999 .
[94] B. Glickman,et al. Competition among juvenile Atlantic salmon (Salmo salar) and steelhead (Oncorhynchus mykiss): relevance to invasion potential in British Columbia , 2001 .
[95] J. Bart. Acceptance Criteria for Using Individual‐Based Models to Make Management Decisions , 1995 .
[96] S. Brandt,et al. Innovative Approaches with Bioenergetics Models: Future Applications to Fish Ecology and Management , 1993 .
[97] Anton T. Ibbotson,et al. Predicting juvenile salmonid drift-feeding habitat quality using a three-dimensional hydraulic-bioenergetic model , 2004 .
[98] John R. Koza,et al. Hidden Order: How Adaptation Builds Complexity. , 1995, Artificial Life.
[99] Handbook of freshwater fishery biology , 1951 .
[100] Birgit Müller,et al. A standard protocol for describing individual-based and agent-based models , 2006 .
[101] G. Grossman,et al. A new optimal foraging model predicts habitat use by drift‐feeding stream minnows , 2002 .
[102] J. Hudson,et al. Movement Patterns of Large Brown Trout in the Mainstream Au Sable River, Michigan , 2004 .
[103] Peter W. Sorensen,et al. High rate of redd superimposition by brook trout (Salvelinus fontinalis) and brown trout (Salmo trutta) in a Minnesota stream cannot be explained by habitat availability alone , 1998 .
[104] J. Cech,et al. Temperature influences on California rainbow trout physiological performance , 2000, Fish Physiology and Biochemistry.
[105] P. Braaten,et al. Development and evaluation of bioenergetic-based habitat suitability criteria for trout , 1997 .
[106] B. Harvey,et al. The impact of dipper, Cinclus mexicanus, predation on stream benthos , 1993 .
[107] T. Quinn,et al. Size- and Sex-Selective Mortality of Adult Sockeye Salmon: Bears, Gulls, and Fish Out of Water , 2001 .
[108] John G. Williams. Lost in Space: Minimum Confidence Intervals for Idealized PHABSIM Studies , 1996 .
[109] N. Metcalfe,et al. Prior residence, territory quality and life‐history strategies in juvenile Atlantic salmon (Salmo salar L.) , 1999 .
[110] K. Young. Evolution of fighting behavior under asymmetric competition: an experimental test with juvenile salmonids , 2003 .
[111] Taylor,et al. Seasonal temperature acclimatisation of rainbow trout: cardiovascular and morphometric influences on maximal sustainable exercise level , 1996, The Journal of experimental biology.
[112] T. Thorslund,et al. Effects of Constant Temperatures and Diel Temperature Fluctuations on Specific Growth and Mortality Rates and Yield of Juvenile Rainbow Trout, Salmo gairdneri , 1977 .
[113] R. Ydenberg,et al. Timing Games in the Reproductive Phenology of Female Pacific Salmon (Oncorhynchus spp.) , 2003, The American Naturalist.
[114] Robert H. Gardner,et al. Individual Parameter Perturbation and Error Analysis of Fish Bioenergetics Models , 1986 .
[115] Donald L. Kramer,et al. Territory Size as a Predictor of the Upper Limit to Population Density of Juvenile Salmonids in Streams , 1990 .
[116] C. Ryer,et al. Differential effects of turbidity on prey consumption of piscivorous and planktivorous fish , 2003 .
[117] Steven F. Railsback,et al. Movement rules for individual-based models of stream fish , 1999 .
[118] Glen E. P. Ropella,et al. SOFTWARE ENGINEERING CONSIDERATIONS FOR INDIVIDUAL-BASED MODELS , 2008 .
[119] Nicholas F. Hughes,et al. Ranking of Feeding Positions by Drift-Feeding Arctic Grayling (Thymallus arcticus) in Dominance Hierarchies , 1992 .
[120] H. Clepper. Predator-prey systems in fisheries management. , 1979 .
[121] Nicholas F. Hughes,et al. Selection of Positions by Drift-Feeding Salmonids in Dominance Hierarchies: Model and Test for Arctic Grayling (Thymallus arcticus) in Subarctic Mountain Streams, Interior Alaska , 1992 .
[122] Steven F. Railsback,et al. Estimating Multi-Factor Cumulative Watershed Effects on Fish Populations with an Individual-Based Model , 2007 .
[123] C. Clark,et al. Towards a Unifield Foraging Theory , 1986 .
[124] K. Fausch,et al. Experimentally induced foraging mode shift by sympatric charrs in a Japanese mountain stream , 1997 .
[125] NeXT Computer,et al. Nextstep object‐oriented programming and the objective C language : 日本語版 , 1993 .
[126] Lawrence M. Dill,et al. Position Choice by Drift-Feeding Salmonids: Model and Test for Arctic Grayling (Thymallus arcticus) in Subarctic Mountain Streams, Interior Alaska , 1990 .
[127] P. Moyle,et al. Segregation by species and size classes of rainbow trout, Salmo gairdneri, and Sacramento sucker, Catostomus occidentalis, in three California streams , 1984, Environmental Biology of Fishes.
[128] A. J. Stewart,et al. Fish size and habitat depth relationships in headwater streams , 1991, Oecologia.
[129] W. Hubert,et al. Physiological responses of juvenile rainbow trout to fasting and swimming activity: Effects on body composition and condition indices , 2003 .
[130] M. Inoue,et al. Effects of longitudinal variations in stream habitat structure on fish abundance: an analysis based on subunit-scale habitat classification , 2002 .
[131] Jeanine Weekes Schroer,et al. The Finite String Newsletter Abstracts of Current Literature Glisp User's Manual , 2022 .
[132] S. Railsback,et al. Exploring the Persistence of Stream-Dwelling Trout Populations under Alternative Real-World Turbidity Regimes with an Individual-Based Model , 2009 .
[133] B. Dickerson,et al. Effects of High Chronic Temperatures and Diel Temperature Cycles on the Survival and Growth of Lahontan Cutthroat Trout , 1999 .
[134] J. K. Haschenburger. A Probability model of scour and fill depths in gravel‐bed channels , 1999 .
[135] P. DeVries. Riverine salmonid egg burial depths: review of published data and implications for scour studies , 1997 .
[136] Steven F. Railsback,et al. Tests of Theory for Diel Variation in Salmonid Feeding Activity and Habitat Use , 2005 .
[137] J. Bednarz,et al. Great Blue Heron Predation on Stocked Rainbow Trout in an Arkansas Tailwater Fishery , 2004 .
[138] Effects of elevated water temperature on the critical swim speeds of yearling rainbow trout Salmo gairdneri , 1982 .
[139] T. J. Lam. 2 Environmental Influences on Gonadal Activity in Fish , 1983 .
[140] Howard B. Stauffer,et al. WHAT CAN HABITAT PREFERENCE MODELS TELL US? TESTS USING A VIRTUAL TROUT POPULATION , 2003 .
[141] N. Ringler,et al. Comparison of Actual and Potential Growth Rates of Brown Trout (Salmo trutta) in Natural Streams Based on Bioenergetic Models , 1989 .
[142] G. Grossman,et al. Turbidity‐Induced Changes in Reactive Distance of Rainbow Trout , 1992 .
[143] E. R. Keeley. DEMOGRAPHIC RESPONSES TO FOOD AND SPACE COMPETITION BY JUVENILE STEELHEAD TROUT , 2001 .
[144] S. Hurlbert. Pseudoreplication and the Design of Ecological Field Experiments , 1984 .
[145] P. Dumont,et al. A Simple Model to Estimate Growth Rate of Lotic Insect Larvae and Its Value for Estimating Population and Community Production , 1994, Journal of the North American Benthological Society.
[146] Neil B. Metcalfe,et al. Food availability and the nocturnal vs. diurnal foraging trade‐off in juvenile salmon , 1999 .
[147] G. Huse. Individual‐based Modeling and Ecology , 2008 .
[148] Andrew Sih,et al. Predation: direct and indirect impacts on aquatic communities , 1988 .
[149] M. Selim Yalin,et al. Mechanics of sediment transport , 1972 .