The tammar wallaby major histocompatibility complex shows evidence of past genomic instability

[1]  J. Brosius,et al.  Tracking Marsupial Evolution Using Archaic Genomic Retroposon Insertions , 2010, PLoS biology.

[2]  Sandra D. Melman,et al.  Evolution of the opossum major histocompatibility complex: evidence for diverse alternative splice patterns and low polymorphism among class I genes , 2009, Immunology.

[3]  J. Harrow,et al.  MHC-linked and un-linked class I genes in the wallaby , 2009, BMC Genomics.

[4]  S. Beck,et al.  High levels of genetic variation at MHC class II DBB loci in the tammar wallaby (Macropus eugenii) , 2009, Immunogenetics.

[5]  D. Gleeson,et al.  Novel alleles in classical major histocompatibility complex class II loci of the brushtail possum (Trichosurus vulpecula) , 2008, Immunogenetics.

[6]  S. Sommer,et al.  Selection, diversity and evolutionary patterns of the MHC class II DAB in free-ranging Neotropical marsupials , 2008, BMC Genetics.

[7]  Juliane C. Dohm,et al.  Disruption and pseudoautosomal localization of the major histocompatibility complex in monotremes , 2007, Genome Biology.

[8]  K. Belov,et al.  Characterization of major histocompatibility complex class I and class II genes from the Tasmanian devil (Sarcophilus harrisii) , 2007, Immunogenetics.

[9]  Kate E. Jones,et al.  The delayed rise of present-day mammals , 1990, Nature.

[10]  J. Graves,et al.  Class I genes have split from the MHC in the tammar wallaby , 2007, Cytogenetic and Genome Research.

[11]  J. Graves,et al.  Evolution and comparative analysis of the MHC Class III inflammatory region , 2006, BMC Genomics.

[12]  T. Madsen,et al.  MHC class I variation associates with parasite resistance and longevity in tropical pythons , 2006, Journal of evolutionary biology.

[13]  M. Flajnik,et al.  Ancestral Organization of the MHC Revealed in the Amphibian Xenopus1 , 2006, The Journal of Immunology.

[14]  Anthony T Papenfuss,et al.  Reconstructing an Ancestral Mammalian Immune Supercomplex from a Marsupial Major Histocompatibility Complex , 2006, PLoS biology.

[15]  Tao Jiang,et al.  OligoSpawn: a software tool for the design of overgo probes from large unigene datasets , 2006, BMC Bioinformatics.

[16]  Jerzy K. Kulski,et al.  An update of the HLA genomic region, locus information and disease associations: 2004. , 2004, Tissue antigens.

[17]  K. Miska,et al.  Analysis of a marsupial MHC region containing two recently duplicated class I loci , 2004, Mammalian Genome.

[18]  R. O’Neill,et al.  A centromere-specific retroviral element associated with breaks of synteny in macropodine marsupials , 2004, Cytogenetic and Genome Research.

[19]  K. Belov,et al.  Marsupial MHC Class II β Genes Are Not Orthologous to the Eutherian β Gene Families , 2004 .

[20]  Sophie Palmer,et al.  Complete MHC haplotype sequencing for common disease gene mapping. , 2004, Genome research.

[21]  Sudhir Kumar,et al.  MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment , 2004, Briefings Bioinform..

[22]  K. Belov,et al.  Molecular cloning and characterization of the polymorphic MHC class II DBB from the tammar wallaby (Macropus eugenii) , 2004, Immunogenetics.

[23]  J. Kaufman,et al.  The properties of the single chicken MHC classical class II α chain (B-LA) gene indicate an ancient origin for the DR/E-like isotype of class II molecules , 2003, Immunogenetics.

[24]  Jerzy K. Kulski,et al.  Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man , 2002, Immunological reviews.

[25]  J. Trowsdale The gentle art of gene arrangement: the meaning of gene clusters , 2002, Genome Biology.

[26]  S. Weissman,et al.  Human MHC class III and IV genes and disease associations. , 2001, Frontiers in bioscience : a journal and virtual library.

[27]  C. Soderlund,et al.  Contigs built with fingerprints, markers, and FPC V4.7. , 2000, Genome research.

[28]  J. Kaufman,et al.  The simple chicken major histocompatibility complex: life and death in the face of pathogens and vaccines. , 2000, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[29]  P. Chardon,et al.  The porcine Major Histocompatibility Complex and related paralogous regions: a review , 2000, Genetics Selection Evolution.

[30]  E Soeda,et al.  Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[31]  J. Kaufman,et al.  Co-evolving genes in MHC haplotypes: the "rule" for nonmammalian vertebrates? , 1999, Immunogenetics.

[32]  C. Auffray,et al.  The chicken B locus is a minimal essential major histocompatibility complex , 1999, Nature.

[33]  W. H. Stone,et al.  Identification and sequence analysis of an Mhc class II B gene in a marsupial (Monodelphis domestica) , 1999, Immunogenetics.

[34]  J. Goedert,et al.  HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage. , 1999, Science.

[35]  S. Beck,et al.  Gene organisation determines evolution of function in the chicken MHC , 1999, Immunological reviews.

[36]  E. Joly,et al.  Co-evolution of rat TAP transporters and MHC class I RT1-A molecules , 1998, Current Biology.

[37]  R. Wilson,et al.  High throughput fingerprint analysis of large-insert clones. , 1997, Genome research.

[38]  M. Flajnik,et al.  Major histocompatibility complex gene mapping in the amphibian Xenopus implies a primordial organization. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[39]  W. Newell,et al.  Evolutionary dynamics of non-coding sequences within the class II region of the human MHC. , 1996, Journal of molecular biology.

[40]  J. Trowsdale,et al.  DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing. , 1992, Journal of molecular biology.

[41]  J. Klein,et al.  MHC class II genes of a marsupial, the red-necked wallaby (Macropus rufogriseus): identification of new gene families. , 1991, Molecular biology and evolution.

[42]  Robert P. Erickson,et al.  Natural history of the major histocompatibility complex , 1987 .

[43]  R. Germain,et al.  Influence of allelic polymorphism on the assembly and surface expression of class II MHC (Ia) molecules , 1985, Cell.

[44]  Gang Wang,et al.  ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs) , 2007, BMC Genomics.

[45]  K. Belov,et al.  Marsupial MHC class II beta genes are not orthologous to the eutherian beta gene families. , 2004, The Journal of heredity.

[46]  J. Trowsdale,et al.  Comparative genomics of major histocompatibility complexes , 2004, Immunogenetics.

[47]  Á. Spotorno,et al.  Radiation of Extant Marsupials After the K/T Boundary: Evidence from Complete Mitochondrial Genomes , 2003, Journal of Molecular Evolution.

[48]  S. Humphray,et al.  Contiguation of bacterial clones. , 2001, Methods in molecular biology.

[49]  T. A. Hall,et al.  BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .

[50]  Stephen L. Johnson,et al.  Mapping of Mhc class I and class II regions to different linkage groups in the zebrafish, Danio rerio , 1997, Immunogenetics.

[51]  L. G. Davis,et al.  Basic methods in molecular biology , 1986 .