Analysing multiple time series and extending significance testing in wavelet analysis

In nature, non-stationarity is rather typical, but the number of statistical tools allowing for non-stationarity remains rather limited. Wavelet analysis is such a tool allowing for non- stationarity but the lack of an appropriate test for statistical inference as well as the difficulty to deal with multiple time series are 2 important shortcomings that limits its use in ecology. We present 2 approaches to deal with these shortcomings. First, we used 1/ƒ β models to test cycles in the wavelet spectrum against a null hypothesis that takes into account the highly autocorrelated nature of ecological time series. To illustrate the approach, we investigated the fluctuations in bluefin tuna trap catches with a set of different null models. The 1/ƒ β models approach proved to be the most consistent to discriminate significant cycles. Second, we used the maximum covariance analysis to compare, in a quantitative way, the time-frequency patterns (i.e. the wavelet spectra) of numerous time series. This approach built cluster trees that grouped the wavelet spectra according to their time-frequency patterns. Controlled signals and time series of sea surface temperature (SST) in the Mediterranean Sea were used to test the ability and power of this approach. The results were satisfactory and clusters on the SST time series displayed a hierarchical division of the Mediterranean into a few homogeneous areas that are known to display different hydrological and oceanic patterns. We discuss the limits and potentialities of these methods to study the associations between ecological and environmental fluctuations.

[1]  J. Fromentin,et al.  Are the long-term fluctuations in Atlantic bluefin tuna (Thunnus thynnus) population related to environmental changes? , 2004 .

[2]  A. Hastings Transient dynamics and persistence of ecological systems , 2001 .

[3]  J. Vik,et al.  Effects of regime shifts on the population dynamics of the grey-sided vole in Hokkaido, Japan , 2006 .

[4]  Ewa Lukasik Wavelet packets based features selection for voiceless plosives classification , 2000, 2000 IEEE International Conference on Acoustics, Speech, and Signal Processing. Proceedings (Cat. No.00CH37100).

[5]  N. Kasdin Discrete simulation of colored noise and stochastic processes and 1/fα power law noise generation , 1995, Proc. IEEE.

[6]  T. Schreiber,et al.  Surrogate time series , 1999, chao-dyn/9909037.

[7]  Owen L. Petchey,et al.  Effects on population persistence: the interaction between environmental noise colour, intraspecific competition and space , 1997, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[8]  J. Fromentin,et al.  Long-term fluctuations in the eastern Atlantic and Mediterranean bluefin tuna population , 2001 .

[9]  P. Yodzis,et al.  THE COLOR OF ENVIRONMENTAL NOISE , 2004 .

[10]  X. Cheng,et al.  Orthogonal Rotation of Spatial Patterns Derived from Singular Value Decomposition Analysis , 1995 .

[11]  S. Hales,et al.  Infectious Diseases, Climate Influences, and Nonstationarity , 2006, PLoS medicine.

[12]  Nadia Pinardi,et al.  Variability of the large scale general circulation of the Mediterranean Sea from observations and modelling: a review , 2000 .

[13]  Jean-Marc Fromentin,et al.  Recurrent and density-dependent patterns in long-term fluctuations of Atlantic bluefin tuna trap catches , 2006 .

[14]  J. Vik,et al.  Wavelet analysis of ecological time series , 2008, Oecologia.

[15]  J. Halley Ecology, evolution and 1 f -noise. , 1996, Trends in ecology & evolution.

[16]  Richard F. Voss,et al.  Fractals in nature: from characterization to simulation , 1988 .

[17]  Ingrid Daubechies,et al.  Ten Lectures on Wavelets , 1992 .

[18]  Matthew Newman,et al.  A caveat concerning singular value decomposition , 1995 .

[19]  Bernard Cazelles,et al.  Porcupine Feeding Scars and Climatic Data Show Ecosystem Effects of the Solar Cycle , 2004, The American Naturalist.

[20]  Pejman Rohani,et al.  Estimating 1/fα scaling exponents from short time-series , 2002 .

[21]  Eamonn J. Keogh,et al.  Dimensionality Reduction for Fast Similarity Search in Large Time Series Databases , 2001, Knowledge and Information Systems.

[22]  Schreiber,et al.  Improved Surrogate Data for Nonlinearity Tests. , 1996, Physical review letters.

[23]  H. Storch,et al.  Statistical Analysis in Climate Research , 2000 .

[24]  S. Mallat,et al.  Adaptive covariance estimation of locally stationary processes , 1998 .

[25]  Frédéric Ménard,et al.  Climatic oscillations and tuna catch rates in the Indian Ocean: a wavelet approach to time series analysis , 2007 .

[26]  T. Keitt,et al.  Detection of scale-specific community dynamics using wavelets. , 2006, Ecology.

[27]  Dit-Yan Yeung,et al.  Mixtures of ARMA models for model-based time series clustering , 2002, 2002 IEEE International Conference on Data Mining, 2002. Proceedings..

[28]  John H. Steele,et al.  A comparison of terrestrial and marine ecological systems , 1985, Nature.

[29]  Douglas Maraun,et al.  Nonlinear Processes in Geophysics , 2000 .

[30]  Ka-Ming Lau,et al.  Climate Signal Detection Using Wavelet Transform: How to Make a Time Series Sing , 1995 .

[31]  Bernard Cazelles,et al.  Symbolic dynamics for identifying similarity between rhythms of ecological time series , 2004 .

[32]  Stuart L. Pimm,et al.  The variability of population densities , 1988, Nature.

[33]  Timothy H. Keitt,et al.  SCALE‐SPECIFIC INFERENCE USING WAVELETS , 2005 .

[34]  O. Bjørnstad,et al.  Travelling waves and spatial hierarchies in measles epidemics , 2001, Nature.

[35]  C. Millot Some features of the Algerian Current , 1985 .

[36]  John M. Halley,et al.  The long-term temporal variability and spectral colour of animal populations , 2002 .

[37]  Bernard Cazelles,et al.  Detection of imperfect population synchrony in an uncertain world , 2003 .

[38]  G. Mellor,et al.  A Numerical Study of the Mediterranean Sea Circulation , 1995 .

[39]  T. Spies,et al.  Characterizing canopy gap structure in forests using wavelet analysis , 1992 .

[40]  Catherine A. Smith,et al.  An Intercomparison of Methods for Finding Coupled Patterns in Climate Data , 1992 .

[41]  P. Yodzis,et al.  Black noise and population persistence , 1999, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[42]  George Sugihara,et al.  Distinguishing random environmental fluctuations from ecological catastrophes for the North Pacific Ocean , 2005, Nature.

[43]  Eamonn J. Keogh,et al.  An Enhanced Representation of Time Series Which Allows Fast and Accurate Classification, Clustering and Relevance Feedback , 1998, KDD.

[44]  Hans von Storch,et al.  Long‐term persistence in climate and the detection problem , 2006 .

[45]  Maya R. Gupta,et al.  Wavelet Principal Component Analysis and its Application to Hyperspectral Images , 2006, 2006 International Conference on Image Processing.

[46]  Chris Chatfield,et al.  The Analysis of Time Series: An Introduction , 1981 .

[47]  Joaquín Tintoré,et al.  A study of an intense density front in the eastern Alboran Sea: the Almeria-Oran front , 1988 .

[48]  James Theiler,et al.  Testing for nonlinearity in time series: the method of surrogate data , 1992 .

[49]  Pong C. Yuen,et al.  Human face recognition using PCA on wavelet subband , 2000, J. Electronic Imaging.

[50]  Ambuj K. Singh,et al.  Efficient retrieval for browsing large image databases , 1996, CIKM '96.

[51]  Arturo H. Ariño,et al.  On the nature of population extremes , 1995, Evolutionary Ecology.

[52]  G. Wornell Wavelet-based representations for the 1/f family of fractal processes , 1993, Proc. IEEE.

[53]  H. Tong,et al.  From patterns to processes: phase and density dependencies in the Canadian lynx cycle. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[54]  K. Stergiou,et al.  The implications of increasing variability of fish landings , 2005 .

[55]  Jim M Cushing,et al.  Phase switching in population cycles , 1998, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[56]  C. Torrence,et al.  A Practical Guide to Wavelet Analysis. , 1998 .

[57]  John H. Lawton,et al.  More time means more variation , 1988, Nature.