论文信息 - Draft Genome Sequence of Pseudoalteromonas tetraodonis Strain UCD-SED8 (Phylum Gammaproteobacteria)

Draft Genome Sequence of Pseudoalteromonas tetraodonis Strain UCD-SED8 (Phylum Gammaproteobacteria)

ABSTRACT Here, we present the draft genome sequence of Pseudoalteromonas tetraodonis UCD-SED8, a marine bacterium normally associated with the production of tetrodotoxin in pufferfish. This strain was isolated from sediment samples surrounding Zostera marina roots collected from Bodega Marine, California. The assembly consists of 4,017,727 bp contained in 35 contigs.

J. Eisen | D. Coil | J. Lang | G. Jospin | Ruth D. Lee

[1] David A. Coil,et al. Swabs to genomes: a comprehensive workflow , 2015, PeerJ.

[2] Holly M. Bik,et al. PhyloSift: phylogenetic analysis of genomes and metagenomes , 2014, PeerJ.

[3] J. Eisen,et al. Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups , 2013, PloS one.

[4] M. Facciotti,et al. An Integrated Pipeline for de Novo Assembly of Microbial Genomes , 2012, PloS one.

[5] Rick L. Stevens,et al. The RAST Server: Rapid Annotations using Subsystems Technology , 2008, BMC Genomics.

[6] R. Colwell,et al. Retrieval of the species Alteromonas tetraodonis Simidu et al. 1990 as Pseudoalteromonas tetraodonis comb. nov. and emendation of description. , 2001, International journal of systematic and evolutionary microbiology.

[7] T. Yasumoto,et al. Taxonomy of four marine bacterial strains that produce tetrodotoxin. , 1990, International journal of systematic bacteriology.