SLC15A4 controls endolysosomal TLR7-9 responses by recruiting the innate immune adaptor TASL

Nucleic acid sensing by endolysosomal Toll-like receptors (TLRs) plays a crucial role in innate immune responses to invading pathogens. In contrast, aberrant activation of these pathways is associated with several autoimmune diseases, such as systemic lupus erythematosus (SLE). The endolysosomal solute carrier family 15 member 4 (SLC15A4) is required for TLR7, TLR8 and TLR9-induced inflammatory responses and for disease development in different SLE models. SLC15A4 has been proposed to affect TLR7-9 activation through its transport activity, as well as by assembling in an IRF5-activating signalling complex with the innate immune adaptor TASL, but the relative contribution of these different functions remains unclear. Here we show that the essential role of SLC15A4 is to recruit TASL to the endolysosomal compartment, while its transport activity is dispensable. Targeting of TASL to the endolysosomal compartment is sufficient to rescue TLR7-9-induced IRF5 activation in SLC15A4-deficient cells. In line with this, lysosomal-localized TASL restored proinflammatory cytokines and type I interferon responses in absence of SLC15A4. Our study reveals that SLC15A4 acts as a signalling scaffold and that this transport-independent function is essential to control TLR7-9-mediated inflammatory responses. These findings further support targeting the SLC15A4-TASL complex as a potential therapeutic strategy for SLE and related diseases.

[1]  C. López-Haber,et al.  The phagosomal solute transporter SLC15A4 promotes inflammasome activity via mTORC1 signaling and autophagy restraint in dendritic cells , 2022, The EMBO journal.

[2]  T. Andrews,et al.  TLR7 gain-of-function genetic variation causes human lupus , 2022, Nature.

[3]  B. Beutler,et al.  The solute carrier SLC15A4 is required for optimal trafficking of nucleic acid–sensing TLRs and ligands to endolysosomes , 2022, Proceedings of the National Academy of Sciences of the United States of America.

[4]  Y. Crow,et al.  The type I interferonopathies: 10 years on , 2021, Nature Reviews Immunology.

[5]  Toshihiko Kobayashi,et al.  Lysosomal amino acid transporters as key players in inflammatory diseases. , 2021, International immunology.

[6]  M. Suematsu,et al.  SLC15A4 mediates M1-prone metabolic shifts in macrophages and guards immune cells from metabolic stress , 2021, Proceedings of the National Academy of Sciences.

[7]  T. Taniguchi,et al.  Genetic and chemical inhibition of IRF5 suppresses pre-existing mouse lupus-like disease , 2021, Nature Communications.

[8]  G. Barton,et al.  Regulation of the nucleic acid-sensing Toll-like receptors , 2021, Nature reviews. Immunology.

[9]  G. Superti-Furga,et al.  Recent developments in ligands and chemical probes targeting solute carrier transporters. , 2021, Current opinion in chemical biology.

[10]  Toshihiko Kobayashi,et al.  Human SLC15A4 is crucial for TLR-mediated type I Interferon production and mitochondrial integrity. , 2021, International immunology.

[11]  Z. Modrušan,et al.  The peptide symporter SLC15a4 is essential for the development of systemic lupus erythematosus in murine models , 2021, PloS one.

[12]  T. Dörner,et al.  Toll-like receptor signalling in B cells during systemic lupus erythematosus , 2020, Nature Reviews Rheumatology.

[13]  M. Weirauch,et al.  Meta-analysis of 208370 East Asians identifies 113 susceptibility loci for systemic lupus erythematosus , 2020, Annals of the Rheumatic Diseases.

[14]  G. Hartmann,et al.  Immune Sensing Mechanisms that Discriminate Self from Altered Self and Foreign Nucleic Acids , 2020, Immunity.

[15]  G. Superti-Furga,et al.  TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9 , 2020, Nature.

[16]  K. Fitzgerald,et al.  Toll-like Receptors and the Control of Immunity , 2020, Cell.

[17]  L. Gallo,et al.  The Druggability of Solute Carriers. , 2019, Journal of medicinal chemistry.

[18]  W. Robinson,et al.  B cell checkpoints in autoimmune rheumatic diseases , 2019, Nature Reviews Rheumatology.

[19]  Zhijian J. Chen,et al.  cGAS in action: Expanding roles in immunity and inflammation , 2019, Science.

[20]  G. Núñez,et al.  SLC15A2 and SLC15A4 Mediate the Transport of Bacterially Derived Di/Tripeptides To Enhance the Nucleotide-Binding Oligomerization Domain–Dependent Immune Response in Mouse Bone Marrow–Derived Macrophages , 2018, The Journal of Immunology.

[21]  B. Beutler,et al.  Induction of Systemic Autoimmunity by a Xenobiotic Requires Endosomal TLR Trafficking and Signaling from the Late Endosome and Endolysosome but Not Type I IFN , 2017, The Journal of Immunology.

[22]  H. Tsutsui,et al.  Lysosome biogenesis regulated by the amino-acid transporter SLC15A4 is critical for functional integrity of mast cells , 2017, International immunology.

[23]  K. Nakayama,et al.  Structural basis for the assembly of the Ragulator-Rag GTPase complex , 2017, Nature Communications.

[24]  H. Lindner,et al.  Crystal structure of the human lysosomal mTORC1 scaffold complex and its impact on signaling , 2017, Science.

[25]  S. Newstead Recent advances in understanding proton coupled peptide transport via the POT family. , 2017, Current opinion in structural biology.

[26]  P. Gregersen,et al.  Transancestral mapping and genetic load in systemic lupus erythematosus , 2017, Nature Communications.

[27]  G. Diallinas Transceptors as a functional link of transporters and receptors , 2017, Microbial cell.

[28]  R. Keep,et al.  A novel role for PHT1 in the disposition of l‐histidine in brain: In vitro slice and in vivo pharmacokinetic studies in wildtype and Pht1 null mice , 2017, Biochemical pharmacology.

[29]  Kathleen E. Sullivan,et al.  New insights into the immunopathogenesis of systemic lupus erythematosus , 2016, Nature Reviews Rheumatology.

[30]  E. Latz,et al.  Nucleic acid‐sensing TLRs and autoimmunity: novel insights from structural and cell biology , 2016, Immunological reviews.

[31]  J. Rioux,et al.  Genetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus , 2015, Nature Genetics.

[32]  Liwei Lu,et al.  Roles of B Cell-Intrinsic TLR Signals in Systemic Lupus Erythematosus , 2015, International journal of molecular sciences.

[33]  Sky W. Brubaker,et al.  Innate immune pattern recognition: a cell biological perspective. , 2015, Annual review of immunology.

[34]  N. Grishin,et al.  Phosphorylation of innate immune adaptor proteins MAVS, STING, and TRIF induces IRF3 activation , 2015, Science.

[35]  B. Beutler,et al.  Slc15a4 function is required for intact class switch recombination to IgG2c in response to TLR9 stimulation , 2015, Immunology and cell biology.

[36]  G. Superti-Furga,et al.  SLC38A9 is a component of the lysosomal amino acid-sensing machinery that controls mTORC1 , 2014, Nature.

[37]  S. Yokoyama,et al.  The histidine transporter SLC15A4 coordinates mTOR-dependent inflammatory responses and pathogenic antibody production. , 2014, Immunity.

[38]  Anne-Kathrin Kienzler,et al.  Sphingosine-1-phosphate receptors control B-cell migration through signaling components associated with primary immunodeficiencies, chronic lymphocytic leukemia, and multiple sclerosis. , 2014, The Journal of allergy and clinical immunology.

[39]  R. Bonegio,et al.  Interferon Regulatory Factor-5 Deficiency Ameliorates Disease Severity in the MRL/lpr Mouse Model of Lupus in the Absence of a Mutation in DOCK2 , 2014, PloS one.

[40]  Zhaoshi Jiang,et al.  Endosomes are specialized platforms for bacterial sensing and NOD2 signalling , 2014, Nature.

[41]  H. Shin,et al.  Ethnic specificity of lupus-associated loci identified in a genome-wide association study in Korean women , 2013, Annals of the rheumatic diseases.

[42]  B. Beutler,et al.  Essential requirement for IRF8 and SLC15A4 implicates plasmacytoid dendritic cells in the pathogenesis of lupus , 2013, Proceedings of the National Academy of Sciences.

[43]  J. Kere,et al.  Genes identified in Asian SLE GWASs are also associated with SLE in Caucasian populations , 2012, European Journal of Human Genetics.

[44]  P. Krebs,et al.  Slc15a4, a Gene Required for pDC Sensing of TLR Ligands, Is Required to Control Persistent Viral Infection , 2012, PLoS pathogens.

[45]  Lisong Yang,et al.  Irf5‐deficient mice are protected from pristane‐induced lupus via increased Th2 cytokines and altered IgG class switching , 2012, European journal of immunology.

[46]  N. Kato,et al.  The solute carrier family 15A4 regulates TLR9 and NOD1 functions in the innate immune system and promotes colitis in mice. , 2011, Gastroenterology.

[47]  T. Mak,et al.  Interferon regulatory factor 5 is critical for the development of lupus in MRL/lpr mice. , 2011, Arthritis and rheumatism.

[48]  B. Beutler,et al.  Slc15a4, AP-3, and Hermansky-Pudlak syndrome proteins are required for Toll-like receptor signaling in plasmacytoid dendritic cells , 2010, Proceedings of the National Academy of Sciences.

[49]  K. Honda,et al.  Contribution of IRF5 in B cells to the development of murine SLE-like disease through its transcriptional control of the IgG2a locus , 2010, Proceedings of the National Academy of Sciences.

[50]  C. Liu,et al.  IFN Regulatory Factor 5 Is Required for Disease Development in the FcγRIIB−/−Yaa and FcγRIIB−/− Mouse Models of Systemic Lupus Erythematosus , 2009, The Journal of Immunology.

[51]  Ying Wang,et al.  Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus , 2009, Nature Genetics.

[52]  D. Philpott,et al.  pH-dependent Internalization of Muramyl Peptides from Early Endosomes Enables Nod1 and Nod2 Signaling* , 2009, The Journal of Biological Chemistry.

[53]  M. Okada,et al.  The novel lipid raft adaptor p18 controls endosome dynamics by anchoring the MEK–ERK pathway to late endosomes , 2009, The EMBO journal.

[54]  M. Clare-Salzler,et al.  Plasmacytoid dendritic cells: sensing nucleic acids in viral infection and autoimmune diseases , 2009 .

[55]  Marta E Alarcón-Riquelme,et al.  A common haplotype of interferon regulatory factor 5 (IRF5) regulates splicing and expression and is associated with increased risk of systemic lupus erythematosus , 2006, Nature Genetics.

[56]  J. Kere,et al.  Polymorphisms in the tyrosine kinase 2 and interferon regulatory factor 5 genes are associated with systemic lupus erythematosus. , 2005, American journal of human genetics.

[57]  M. Tomonaga,et al.  A Novel Plasmacytoid Dendritic Cell Line, CAL-1, Established from a Patient with Blastic Natural Killer Cell Lymphoma , 2005, International journal of hematology.

[58]  T. Yamashita,et al.  Cloning and Functional Expression of a Brain Peptide/Histidine Transporter* , 1997, The Journal of Biological Chemistry.