Towards a simulation framework for optimizing infectious disease surveillance: An information theoretic approach for surveillance system design

Infectious disease surveillance systems provide vital data for guiding disease prevention and control policies, yet the formalization of methods to optimize surveillance networks has largely been overlooked. Decisions surrounding surveillance design parameters, such as the number and placement of surveillance sites, target populations, and case definitions, are often determined by expert opinion or deference to operational considerations, without formal analysis of the influence of design parameters on surveillance objectives. Here we propose a simulation framework to guide evidence-based surveillance network design to better achieve specific surveillance goals with limited resources. We define evidence-based surveillance design as a constrained, multi-dimensional, multi-objective, dynamic optimization problem, acknowledging the many operational constraints under which surveillance systems operate, the many dimensions of surveillance system design, the multiple and competing goals of surveillance, and the complex and dynamic nature of disease systems. We describe an analytical framework for the identification of optimal designs through mathematical representations of disease and surveillance processes, definition of objective functions, and the approach to numerical optimization. We then apply the framework to the problem of selecting candidate sites to expand an existing surveillance network under alternative objectives of: (1) improving spatial prediction of disease prevalence at unmonitored sites; or (2) estimating the observed effect of a risk factor on disease. Results of this demonstration illustrate how optimal designs are sensitive to both surveillance goals and the underlying spatial pattern of the target disease. The findings affirm the value of designing surveillance systems through quantitative and adaptive analysis of network characteristics and performance. The framework can be applied to the design of surveillance systems tailored to setting-specific disease transmission dynamics and surveillance needs, and can yield improved understanding of tradeoffs between network architectures.

[1]  Xavier Gandibleux,et al.  Metaheuristics for Multiobjective Optimisation , 2004, Lecture Notes in Economics and Mathematical Systems.

[2]  Dale L. Zimmerman,et al.  Optimal network design for spatial prediction, covariance parameter estimation, and empirical prediction , 2006 .

[3]  Christopher A. Gilligan,et al.  Optimal control of epidemics in metapopulations , 2009, Journal of The Royal Society Interface.

[4]  E. H. Bussell,et al.  Applying optimal control theory to complex epidemiological models to inform real-world disease management , 2019, Philosophical Transactions of the Royal Society B.

[5]  Alfred Stein,et al.  Constrained Optimization of Spatial Sampling using Continuous Simulated Annealing , 1998 .

[6]  Robert H. Lyles,et al.  The likelihood approach for the comparison of medical diagnostic system with multiple binary tests , 2012 .

[7]  Yanzhao Cao,et al.  Optimal control of vector-borne diseases: Treatment and prevention , 2009 .

[8]  Mevin B Hooten,et al.  Statistical Analysis of Environmental Space-Time Processes , 2007 .

[9]  David R. Jones,et al.  A systematic review and evaluation of the use of tumour markers in paediatric oncology: Ewing's sarcoma and neuroblastoma. , 2003, Health technology assessment.

[10]  Honelgn Nahusenay,et al.  A description of malaria sentinel surveillance: a case study in Oromia Regional State, Ethiopia , 2014, Malaria Journal.

[11]  E. Polak,et al.  On Multicriteria Optimization , 1976 .

[12]  Peter J. Diggle,et al.  Bayesian Geostatistical Design , 2006 .

[13]  Robert Schechter,et al.  Swine influenza A (H1N1) infection in two children--Southern California, March-April 2009. , 2009, MMWR. Morbidity and mortality weekly report.

[14]  John S. Brownstein,et al.  Disease Surveillance on Complex Social Networks , 2016, PLoS Comput. Biol..

[15]  J. Correale,et al.  The epidemiology of multiple sclerosis in Latin America and the Caribbean: a systematic review , 2013, Multiple sclerosis.

[16]  Joseph N S Eisenberg,et al.  Integrating disease control strategies: balancing water sanitation and hygiene interventions to reduce diarrheal disease burden. , 2007, American journal of public health.

[17]  Stephen P. Luby,et al.  Hospital-based Surveillance for Rotavirus Gastroenteritis Among Young Children in Bangladesh , 2017, The Pediatric infectious disease journal.

[18]  J. Møller,et al.  Handbook of Spatial Statistics , 2008 .

[19]  Ramanarayanan Viswanathan,et al.  Optimal Decision Fusion in Multiple Sensor Systems , 1987, IEEE Transactions on Aerospace and Electronic Systems.

[20]  Zheng Teng,et al.  Epidemiological and serological surveillance of hand-foot-and-mouth disease in Shanghai, China, 2012–2016 , 2018, Emerging Microbes & Infections.

[21]  Jorge Mateu,et al.  Spatio-Temporal Design: Advances in Efficient Data Acquisition , 2012 .

[22]  F. Cobelens,et al.  National survey of tuberculosis prevalence in Viet Nam. , 2010, Bulletin of the World Health Organization.

[23]  Nedialko B. Dimitrov,et al.  Optimizing Provider Recruitment for Influenza Surveillance Networks , 2012, PLoS Comput. Biol..

[24]  Reza Yaesoubi,et al.  Identifying dynamic tuberculosis case-finding policies for HIV/TB coepidemics , 2013, Proceedings of the National Academy of Sciences.

[25]  Anil Vullikanti,et al.  Fast and near-optimal monitoring for healthcare acquired infection outbreaks , 2019, PLoS Comput. Biol..

[26]  Kyle Ryff,et al.  Detecting Local Zika Virus Transmission in the Continental United States: A Comparison of Surveillance Strategies , 2017, bioRxiv.

[27]  Piotr Czyzżak,et al.  Pareto simulated annealing—a metaheuristic technique for multiple‐objective combinatorial optimization , 1998 .

[28]  Valéry Ridde,et al.  Effective surveillance systems for vector-borne diseases in urban settings and translation of the data into action: a scoping review , 2018, Infectious Diseases of Poverty.

[29]  David Buckeridge,et al.  Principles and Practice of Public Health Surveillance , 2015 .

[30]  S. Lenhart,et al.  Modeling Optimal Intervention Strategies for Cholera , 2010, Bulletin of mathematical biology.

[31]  A. C. Zoni,et al.  Syphilis in the most at-risk populations in Latin America and the Caribbean: a systematic review. , 2013, International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases.

[32]  Christian Drosten,et al.  Human coronavirus OC43 outbreak in wild chimpanzees, Côte d´Ivoire, 2016 , 2018, Emerging Microbes & Infections.

[33]  Shandir Ramlagan,et al.  South African National HIV Prevalence, HIV Incidence, Behaviour and Communication Survey, 2005 , 2008 .

[34]  Anil Vullikanti,et al.  Optimizing spatial allocation of seasonal influenza vaccine under temporal constraints , 2019, PLoS Comput. Biol..

[35]  M. A. Aziz-Alaoui,et al.  Optimal intervention strategies for tuberculosis , 2013, Commun. Nonlinear Sci. Numer. Simul..

[36]  Dick J. Brus,et al.  Sampling for digital soil mapping: A tutorial supported by R scripts , 2019, Geoderma.

[37]  B. Cooper,et al.  Systematic review of isolation policies in the hospital management of methicillin-resistant Staphylococcus aureus: a review of the literature with epidemiological and economic modelling. , 2003, Health technology assessment.

[38]  Nik J. Cunniffe,et al.  Applying optimal control theory to complex epidemiological models to inform real-world disease management , 2018, bioRxiv.

[39]  S. Murphy,et al.  Optimal dynamic treatment regimes , 2003 .

[40]  Thomas Rehle,et al.  South African national HIV prevalence incidence behaviour and communication survey 2008: the health of our children. , 2010 .

[41]  Sadiq M. Sait,et al.  Iterative computer algorithms with applications in engineering - solving combinatorial optimization problems , 2000 .

[42]  Joshua L. Warren,et al.  Bayesian adaptive algorithms for locating HIV mobile testing services , 2018, BMC Medicine.

[43]  Sebastian Funk,et al.  Spatial and temporal dynamics of superspreading events in the 2014–2015 West Africa Ebola epidemic , 2017, Proceedings of the National Academy of Sciences.

[44]  Alberto Maria Segre,et al.  Optimizing influenza sentinel surveillance at the state level. , 2009, American journal of epidemiology.

[45]  Gina Samaan,et al.  Application of WHO’s guideline for the selection of sentinel sites for hospital-based influenza surveillance in Indonesia , 2014, BMC Health Services Research.

[46]  Christian Blum,et al.  Metaheuristics in combinatorial optimization: Overview and conceptual comparison , 2003, CSUR.

[47]  D. Kirschner,et al.  Optimal control of the chemotherapy of HIV , 1997, Journal of mathematical biology.

[48]  J. Medlock,et al.  Optimizing Influenza Vaccine Distribution , 2009, Science.