Complexation of Two Proteic Insect Inhibitors to the Active Site of Chymotrypsin Suggests Decoupled Roles for Binding and Selectivity*

The crystal structures of two homologous inhibitors (PMP-C and PMP-D2v) from the insect Locusta migratoria have been determined in complex with bovine α-chymotrypsin at 2.1- and 3.0-Å resolution, respectively. PMP-C is a potent bovine α-chymotrypsin inhibitor whereas native PMP-D2 is a weak inhibitor of bovine trypsin. One unique mutation at the P1 position converts PMP-D2 into a potent bovine α-chymotrypsin inhibitor. The two peptides have a similar overall conformation, which consists of a triple-stranded antiparallel β-sheet connected by three disulfide bridges, thus defining a novel family of serine protease inhibitors. They have in common the protease interaction site, which is composed of the classical protease binding loop (position P5 to P′4, corresponding to residues 26–34) and of an internal segment (residues 15–18), held together by two disulfide bridges. Structural divergences between the two inhibitors result in an additional interaction site between PMP-D2v (position P10 to P6, residues 21–25) and the residues 172–175 of α-chymotrypsin. This unusual interaction may be responsible for species selectivity. A careful comparison of data on bound and free inhibitors (from this study and previous NMR studies, respectively) suggests that complexation to the protease stabilizes the flexible binding loop (from P5 to P′4).

[1]  R J Fletterick,et al.  Compromise and accommodation in ecotin, a dimeric macromolecular inhibitor of serine proteases. , 2000, Journal of molecular biology.

[2]  S M Swanson,et al.  The structure of an insect chymotrypsin. , 2000, Journal of molecular biology.

[3]  M. Qasim,et al.  What can the structures of enzyme-inhibitor complexes tell us about the structures of enzyme substrate complexes? , 2000, Biochimica et biophysica acta.

[4]  R. Huber,et al.  Structural basis of the endoproteinase-protein inhibitor interaction. , 2000, Biochimica et biophysica acta.

[5]  R. Rayne,et al.  Characterisation of multiple trypsins from the midgut of Locusta migratoria. , 2000, Insect biochemistry and molecular biology.

[6]  É. Várallyay,et al.  Proteinase inhibitors from desert locust, Schistocerca gregaria: engineering of both P(1) and P(1)' residues converts a potent chymotrypsin inhibitor to a potent trypsin inhibitor. , 1999, Biochimica et biophysica acta.

[7]  R. Rayne,et al.  ISOLATION AND CHARACTERISATION OF TWO CHYMOTRYPSINS FROM THE MIDGUT OF LOCUSTA MIGRATORIA , 1999 .

[8]  J. V. Van Beeumen,et al.  Purification and characterization of a group of five novel peptide serine protease inhibitors from ovaries of the desert locust, Schistocerca gregaria , 1998, FEBS letters.

[9]  T. Hynes,et al.  Crystal structures of bovine chymotrypsin and trypsin complexed to the inhibitor domain of alzheimer's amyloid β‐protein precursor (APPI) and basic pancreatic trypsin inhibitor (BPTI): Engineering of inhibitors with altered specificities , 1997, Protein science : a publication of the Protein Society.

[10]  K. Söderhäll,et al.  Pacifastin, a novel 155-kDa heterodimeric proteinase inhibitor containing a unique transferrin chain. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[11]  G. Lippens,et al.  Solution structure of R-elafin, a specific inhibitor of elastase. , 1997, Journal of molecular biology.

[12]  Z. Otwinowski,et al.  [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.

[13]  Y. Katsube,et al.  Crystal structure of an elastase-specific inhibitor elafin complexed with porcine pancreatic elastase determined at 1.9 A resolution. , 1996, Biochemistry.

[14]  J. Lefèvre,et al.  Solution structure of PMP-C: a new fold in the group of small serine proteinase inhibitors. , 1996, Journal of molecular biology.

[15]  C. Boudier,et al.  Serine Protease Inhibition by Insect Peptides Containing a Cysteine Knot and a Triple-stranded β-Sheet (*) , 1995, The Journal of Biological Chemistry.

[16]  Randy J. Read,et al.  DEMON/ANGEL - A SUITE OF PROGRAMS TO CARRY OUT DENSITY MODIFICATION , 1995 .

[17]  P. Koehl,et al.  Solution structure of PMP-D2, a 35-residue peptide isolated from the insect Locusta migratoria. , 1994, Biochemistry.

[18]  M. James,et al.  The molecular structure of the complex of Ascaris chymotrypsin/elastase inhibitor with porcine elastase. , 1994, Structure.

[19]  R. Fletterick,et al.  Macromolecular chelation as an improved mechanism of protease inhibition: structure of the ecotin‐trypsin complex. , 1994, The EMBO journal.

[20]  J. Navaza,et al.  AMoRe: an automated package for molecular replacement , 1994 .

[21]  M. Eguchi Protein protease inhibitors in insects and comparison with mammalian inhibitors. , 1993, Comparative biochemistry and physiology. B, Comparative biochemistry.

[22]  M. Brehélin,et al.  Insect immunity: two proteinase inhibitors from hemolymph of Locusta migratoria. , 1992, Biochemical and biophysical research communications.

[23]  R. Huber,et al.  Natural protein proteinase inhibitors and their interaction with proteinases. , 1992, European journal of biochemistry.

[24]  A. van Dorsselaer,et al.  Isolation and structural determination of three peptides from the insect Locusta migratoria. Identification of a deoxyhexose-linked peptide. , 1992, European journal of biochemistry.

[25]  P. Kraulis A program to produce both detailed and schematic plots of protein structures , 1991 .

[26]  Randy J. Read,et al.  Crystal and molecular structures of the complex of α-chymotrypsin with its inhibitor Turkey ovomucoid third domain at 1.8 Å resolution , 1987 .

[27]  A. Berger,et al.  On the size of the active site in proteases. I. Papain. , 1967, Biochemical and biophysical research communications.