Isolation and Characterization of Metallosphaera Turreted Icosahedral Virus, a Founding Member of a New Family of Archaeal Viruses
暂无分享,去创建一个
John E. Johnson | W. Baumeister | F. Asturias | M. Young | C. M. Lawrence | M. Khoshouei | C. Wagner | V. Reddy | P. Manrique | J. Munson-McGee | C. Lawrence
[1] M. Challberg,et al. Adenovirus DNA replication in vitro: origin and direction of daughter strand synthesis. , 1979, Journal of molecular biology.
[2] H. Malke. J. SAMBROCK, E. F. FRITSCH and T. MANIATIS, Molecular Cloning, A Laboratory Manual (Second Edition), Volumes 1, 2 and 3. 1625 S., zahlreiche Abb. und Tab. Cold Spring Harbor 1989. Cold Spring Harbor Laboratory Press. $ 115.00. ISBN: 0-87969-309-6 , 1990 .
[3] T. Peeples,et al. Bioenergetics of the metal/sulfur-oxidizing extreme thermoacidophile, Metallosphaera sedula , 1993 .
[4] J R Kremer,et al. Computer visualization of three-dimensional image data using IMOD. , 1996, Journal of structural biology.
[5] M. Dyall-Smith,et al. His1, an Archaeal Virus of theFuselloviridae Family That Infects Haloarcula hispanica , 1998, Journal of Virology.
[6] A. Di Fiore,et al. Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. , 1999, BioTechniques.
[7] Robertson Craig,et al. TANDEM: matching proteins with tandem mass spectra. , 2004, Bioinformatics.
[8] W. Zillig,et al. Isolate B12, which harbours a virus-like element, represents a new species of the archaebacterial genus Sulfolobus, Sulfolobus shibatae, sp. nov. , 2004, Archives of Microbiology.
[9] John E. Johnson,et al. The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[10] R. Garrett,et al. Morphology and genome organization of the virus PSV of the hyperthermophilic archaeal genera Pyrobaculum and Thermoproteus: a novel virus family, the Globuloviridae. , 2004, Virology.
[11] R. Garrett,et al. Viral Diversity in Hot Springs of Pozzuoli, Italy, and Characterization of a Unique Archaeal Virus, Acidianus Bottle-Shaped Virus, from a New Family, the Ampullaviridae , 2005, Journal of Virology.
[12] Johannes Söding,et al. The HHpred interactive server for protein homology detection and structure prediction , 2005, Nucleic Acids Res..
[13] David N Mastronarde,et al. Automated electron microscope tomography using robust prediction of specimen movements. , 2005, Journal of structural biology.
[14] D. Stuart,et al. What does structure tell us about virus evolution? , 2005, Current opinion in structural biology.
[15] M. Dyall-Smith,et al. SH1: A novel, spherical halovirus isolated from an Australian hypersaline lake. , 2005, Virology.
[16] W. Denny,et al. CRYSTALLOGRAPHY OF BIOLOGICAL MACROMOLECULES , 2005 .
[17] John E. Johnson,et al. Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[18] J. McIntosh,et al. The Molecular Architecture of Axonemes Revealed by Cryoelectron Tomography , 2006, Science.
[19] R. Garrett,et al. Viruses of the Archaea: a unifying view , 2006, Nature Reviews Microbiology.
[20] Gerard J. Kleywegt,et al. Chapter 17.1 Around O , 2006 .
[21] John E. Johnson,et al. Highly discriminatory binding of capsid-cementing proteins in bacteriophage L. , 2006, Structure.
[22] Maido Remm,et al. Enhancements and modifications of primer design program Primer3 , 2007, Bioinform..
[23] M. Mann,et al. In-gel digestion for mass spectrometric characterization of proteins and proteomes , 2006, Nature Protocols.
[24] P. Shen,et al. Induction and preliminary characterization of a novel halophage SNJ1 from lysogenic Natrinema sp. F5. , 2007, Canadian journal of microbiology.
[25] Steven Salzberg,et al. Identifying bacterial genes and endosymbiont DNA with Glimmer , 2007, Bioinform..
[26] A. Davison. Comparative analysis of the genomes , 2007 .
[27] Harri T Jäälinoja,et al. Structure and host-cell interaction of SH1, a membrane-containing, halophilic euryarchaeal virus , 2008, Proceedings of the National Academy of Sciences.
[28] John E. Johnson,et al. In vivo assembly of an archaeal virus studied with whole-cell electron cryotomography. , 2010, Structure.
[29] M. Rossmann,et al. Structure of the small outer capsid protein, Soc: a clamp for stabilizing capsids of T4-like phages. , 2010, Journal of molecular biology.
[30] K. Nagayama,et al. Phase plates for transmission electron microscopy. , 2010, Methods in enzymology.
[31] W. Inskeep,et al. Terminal Oxidase Diversity and Function in “Metallosphaera yellowstonensis”: Gene Expression and Protein Modeling Suggest Mechanisms of Fe(II) Oxidation in the Sulfolobales , 2011, Applied and Environmental Microbiology.
[32] John M Heumann,et al. Clustering and variance maps for cryo-electron tomography using wedge-masked differences. , 2011, Journal of structural biology.
[33] Sjors H.W. Scheres,et al. RELION: Implementation of a Bayesian approach to cryo-EM structure determination , 2012, Journal of structural biology.
[34] D. Bamford,et al. Closely Related Archaeal Haloarcula hispanica Icosahedral Viruses HHIV-2 and SH1 Have Nonhomologous Genes Encoding Host Recognition Functions , 2012, Journal of Virology.
[35] Shane S. Sturrock,et al. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data , 2012, Bioinform..
[36] Prokaryote viruses studied by electron microscopy , 2012, Archives of Virology.
[37] B. Faircloth,et al. Primer3—new capabilities and interfaces , 2012, Nucleic acids research.
[38] Sen-Lin Tang,et al. PH1: An Archaeovirus of Haloarcula hispanica Related to SH1 and HHIV-2 , 2013, Archaea.
[39] P. Forterre,et al. Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon , 2013, Open Biology.
[40] A. Goldman,et al. The Structure of the NTPase That Powers DNA Packaging into Sulfolobus Turreted Icosahedral Virus 2 , 2013, Journal of Virology.
[41] G. Nemerow,et al. Structures and organization of adenovirus cement proteins provide insights into the role of capsid maturation in virus entry and infection , 2014, Proceedings of the National Academy of Sciences.
[42] W. Baumeister,et al. Volta potential phase plate for in-focus phase contrast transmission electron microscopy , 2014, Proceedings of the National Academy of Sciences.
[43] Björn Usadel,et al. Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..
[44] B. Bolduc,et al. Archaeal Viruses: Diversity, Replication, and Structure. , 2014, Annual review of virology.
[45] Eystein Oveland,et al. PeptideShaker enables reanalysis of MS-derived proteomics data sets , 2015, Nature Biotechnology.
[46] V. Lučić,et al. Electron cryotomography of vitrified cells with a Volta phase plate. , 2015, Journal of structural biology.
[47] M. Young,et al. Structure-Based Mutagenesis of Sulfolobus Turreted Icosahedral Virus B204 Reveals Essential Residues in the Virion-Associated DNA-Packaging ATPase , 2015, Journal of Virology.
[48] Y. Liu,et al. Identification and characterization of SNJ2, the first temperate pleolipovirus integrating into the genome of the SNJ1‐lysogenic archaeal strain , 2015, Molecular microbiology.
[49] David A Agard,et al. Asynchronous data acquisition and on-the-fly analysis of dose fractionated cryoEM images by UCSFImage. , 2015, Journal of structural biology.
[50] E. Moriyama,et al. Complete Genome Sequence of Sulfolobus solfataricus Strain 98/2 and Evolved Derivatives , 2015, Genome Announcements.
[51] Michael J E Sternberg,et al. The Phyre2 web portal for protein modeling, prediction and analysis , 2015, Nature Protocols.
[52] R. Stepanauskas,et al. Nanoarchaeota, Their Sulfolobales Host, and Nanoarchaeota Virus Distribution across Yellowstone National Park Hot Springs , 2015, Applied and Environmental Microbiology.
[53] N. Grigorieff,et al. CTFFIND4: Fast and accurate defocus estimation from electron micrographs , 2015, bioRxiv.
[54] B. Bolduc,et al. 40 Years of archaeal virology: Expanding viral diversity. , 2015, Virology.
[55] Johannes Söding,et al. The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis , 2016, Nucleic Acids Res..
[56] Robert D. Finn,et al. The Pfam protein families database: towards a more sustainable future , 2015, Nucleic Acids Res..
[57] E. Boyd,et al. Acidianus Tailed Spindle Virus: a New Archaeal Large Tailed Spindle Virus Discovered by Culture-Independent Methods , 2016, Journal of Virology.
[58] M. Krupovic,et al. A virus of hyperthermophilic archaea with a unique architecture among DNA viruses , 2016, Proceedings of the National Academy of Sciences.
[59] R. Amann,et al. Direct‐geneFISH: a simplified protocol for the simultaneous detection and quantification of genes and rRNA in microorganisms , 2017, Environmental microbiology.
[60] J. Gilbert,et al. Bacterial and Archaeal Viruses of Himalayan Hot Springs at Manikaran Modulate Host Genomes , 2018, Front. Microbiol..
[61] E. Koonin,et al. Viruses of archaea: Structural, functional, environmental and evolutionary genomics. , 2018, Virus research.
[62] M. Young,et al. Archaeal Viruses from High-Temperature Environments , 2018, Genes.
[63] J. Neumüller. Electron tomography—a tool for ultrastructural 3D visualization in cell biology and histology , 2018, Wiener Medizinische Wochenschrift.