An atypical 7q11.23 deletion in a normal IQ Williams–Beuren syndrome patient

Williams–Beuren syndrome (WBS; OMIM no. 194050) is a multisystemic neurodevelopmental disorder caused by a hemizygous deletion of 1.55 Mb on chromosome 7q11.23 spanning 28 genes. Haploinsufficiency of the ELN gene was shown to be responsible for supravalvular aortic stenosis and generalized arteriopathy, whereas LIMK1, CLIP2, GTF2IRD1 and GTF2I genes were suggested to be linked to the specific cognitive profile and craniofacial features. These insights for genotype–phenotype correlations came from the molecular and clinical analysis of patients with atypical deletions and mice models. Here we report a patient showing mild WBS physical phenotype and normal IQ, who carries a shorter 1 Mb atypical deletion. This rearrangement does not include the GTF2IRD1 and GTF2I genes and only partially the BAZ1B gene. Our results are consistent with the hypothesis that hemizygosity of the GTF2IRD1 and GTF2I genes might be involved in the facial dysmorphisms and in the specific motor and cognitive deficits observed in WBS patients.

[1]  C. Howald,et al.  Two high throughput technologies to detect segmental aneuploidies identify new Williams-Beuren syndrome patients with atypical deletions , 2005, Journal of Medical Genetics.

[2]  L. Peruzzi,et al.  Presenting phenotype and clinical evaluation in a cohort of 22 Williams-Beuren syndrome patients. , 2007, European journal of medical genetics.

[3]  U. Bellugi,et al.  Is It Williams Syndrome? Gtf2ird1 Implicated in Visual–spatial Construction and Gtf2i in Sociability Revealed by High Resolution Arrays Materials and Methods Subject Deletion Analysis Cognitive-behavioral Analysis Results Physical and Developmental Features Deletion Analysis Neurocognitive Performan , 2022 .

[4]  Thomas D. Schmittgen,et al.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.

[5]  P. Strømme,et al.  Prevalence Estimation of Williams Syndrome , 2002, Journal of child neurology.

[6]  C. Cytrynbaum,et al.  Elastin: mutational spectrum in supravalvular aortic stenosis , 2000, European Journal of Human Genetics.

[7]  Lorraine K. Tyler,et al.  Linguistic dissociations in Williams syndrome: evaluating receptive syntax in on-line and off-line tasks , 1998, Neuropsychologia.

[8]  Andreas Meyer-Lindenberg,et al.  Neural mechanisms in Williams syndrome: a unique window to genetic influences on cognition and behaviour , 2006, Nature Reviews Neuroscience.

[9]  M. Bayés,et al.  Mutational mechanisms of Williams-Beuren syndrome deletions. , 2003, American journal of human genetics.

[10]  A. Karmiloff-Smith,et al.  Williams syndrome: use of chromosomal microdeletions as a tool to dissect cognitive and physical phenotypes. , 1999, American journal of human genetics.

[11]  Annette Karmiloff-Smith,et al.  In-depth analysis of spatial cognition in Williams syndrome: A critical assessment of the role of the LIMK1 gene , 2006, Neuropsychologia.

[12]  U. Francke Williams-Beuren syndrome: genes and mechanisms. , 1999, Human molecular genetics.

[13]  Arnaud Cachia,et al.  Parieto-occipital grey matter abnormalities in children with Williams syndrome , 2006, NeuroImage.

[14]  Alexandre Reymond,et al.  Williams–Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase , 2008, European Journal of Human Genetics.

[15]  S. Scherer,et al.  Severe expressive-language delay related to duplication of the Williams-Beuren locus. , 2005, The New England journal of medicine.

[16]  R. Roeder,et al.  Cloning of an Inr‐ and E‐box‐binding protein, TFII‐I, that interacts physically and functionally with USF1 , 1997, The EMBO journal.

[17]  Charlotte N. Henrichsen,et al.  Submicroscopic deletion in patients with Williams-Beuren syndrome influences expression levels of the nonhemizygous flanking genes. , 2006, American journal of human genetics.

[18]  A Ballabio,et al.  WBSCR14, a gene mapping to the Williams--Beuren syndrome deleted region, is a new member of the Mlx transcription factor network. , 2001, Human molecular genetics.

[19]  Christian R Marshall,et al.  Infantile spasms is associated with deletion of the MAGI2 gene on chromosome 7q11.23-q21.11. , 2008, American journal of human genetics.

[20]  Uta Francke,et al.  An atypical deletion of the Williams–Beuren syndrome interval implicates genes associated with defective visuospatial processing and autism , 2006, Journal of Medical Genetics.

[21]  A. Karmiloff-Smith,et al.  Using case study comparisons to explore genotype-phenotype correlations in Williams-Beuren syndrome , 2003, Journal of medical genetics.

[22]  Stephen W. Scherer,et al.  A 1.5 million–base pair inversion polymorphism in families with Williams-Beuren syndrome , 2001, Nature Genetics.

[23]  Rumiko Matsuoka,et al.  Williams syndrome deficits in visual spatial processing linked to GTF2IRD1 and GTF2I on Chromosome 7q11.23 , 2003, Genetics in Medicine.

[24]  M. Tassabehji,et al.  Williams-Beuren syndrome: a challenge for genotype-phenotype correlations. , 2003, Human molecular genetics.

[25]  Stephen J. Palmer,et al.  Expression of Gtf2ird1, the Williams syndrome-associated gene, during mouse development. , 2007, Gene expression patterns : GEP.

[26]  M. A. Frens,et al.  Contribution of CYLN2 and GTF2IRD1 to neurological and cognitive symptoms in Williams Syndrome , 2007, Neurobiology of Disease.

[27]  C. Mervis,et al.  GTF2I hemizygosity implicated in mental retardation in Williams syndrome: Genotype–phenotype analysis of five families with deletions in the Williams syndrome region , 2003, American journal of medical genetics. Part A.

[28]  Alexandre Reymond,et al.  Identification of additional transcripts in the Williams-Beuren syndrome critical region , 2002, Human Genetics.

[29]  A. Winterpacht,et al.  Partial deletion of the critical 1.5 Mb interval in Williams-Beuren syndrome , 2003, Journal of medical genetics.

[30]  Marleen Verhoye,et al.  Targeted mutation of Cyln2 in the Williams syndrome critical region links CLIP-115 haploinsufficiency to neurodevelopmental abnormalities in mice , 2002, Nature Genetics.

[31]  T. Bruxner,et al.  A genome-wide screen for modifiers of transgene variegation identifies genes with critical roles in development , 2008, Genome Biology.

[32]  M. Tassabehji,et al.  A transcription factor involved in skeletal muscle gene expression is deleted in patients with Williams syndrome , 1999, European Journal of Human Genetics.

[33]  M. Tassabehji,et al.  GTF2IRD1 regulates transcription by binding an evolutionarily conserved DNA motif ‘GUCE’ , 2007, FEBS letters.

[34]  C. Mervis,et al.  Rearrangements of the Williams–Beuren syndrome locus: molecular basis and implications for speech and language development , 2007, Expert Reviews in Molecular Medicine.

[35]  R. Borgatti,et al.  Unusual cognitive and behavioural profile in a Williams syndrome patient with atypical 7q11.23 deletion , 2003, Journal of medical genetics.

[36]  Ursula Bellugi,et al.  I. The Neurocognitive Profile of Williams Syndrome: A Complex Pattern of Strengths and Weaknesses , 2000, Journal of Cognitive Neuroscience.

[37]  F. Ruddle,et al.  Identification of the TFII-I family target genes in the vertebrate genome , 2008, Proceedings of the National Academy of Sciences.

[38]  Ananda L Roy,et al.  Essential functions of the Williams-Beuren syndrome-associated TFII-I genes in embryonic development , 2009, Proceedings of the National Academy of Sciences.

[39]  S. Scherer,et al.  The common inversion of the Williams–Beuren syndrome region at 7q11.23 does not cause clinical symptoms , 2008, American journal of medical genetics. Part A.

[40]  Peter Hammond,et al.  GTF2IRD1 in Craniofacial Development of Humans and Mice , 2005, Science.

[41]  F. Ruddle,et al.  Genomic organization of the genes Gtf2ird1, Gtf2i, and Ncf1 at the mouse chromosome 5 region syntenic to the human chromosome 7q11.23 Williams syndrome critical region. , 2002, Genomics.

[42]  A. Selicorni,et al.  Thyroid anomalies in Williams syndrome: Investigation of 95 patients , 2006, American journal of medical genetics. Part A.

[43]  U. Bellugi,et al.  Williams syndrome deficits in visual spatial processing linked to GTF2IRD1 and GTF2I on chromosome 7q11.23. , 2003 .