Tongue squamous cell carcinoma discrimination with Raman spectroscopy and convolutional neural networks

Abstract Discriminating the border of tongue squamous cell carcinoma (TSCC) is very critical for surgical treatment. Based on fiber optic Raman spectroscopy and deep learning technique, this study proposed a framework with convolutional neural networks (CNN) to discriminate TSCC from non-tumorous tissue. First, Raman spectra of 24 samples of TSCC and adjacent tissues from 12 patients were collected by fiber optic Raman spectroscopy system. Through the analysis, the significant differences between TSCC and non-tumorous tissue were occured in the range of 700–1800 cm−1. Then a CNN model was used to extract the nonlinear feature representations from Raman spectra. Finally, extracted features are fed into a fully-connected layer for TSCC classification. The results demonstrated that the CNN model obtained the sensitivity and specificity of 99.07% and 95.37%, respectively. Moreover, comparison results with existing methods showed our method achieved the highest accuracy of TSCC classification. Therefore, Raman spectroscopy combined with the CNN model has a great potential to provide a useful technique for the intraoperative evaluation of the margin of resection of oral tongue squamous cell carcinoma.

[1]  Kevin Petrecca,et al.  Neural networks improve brain cancer detection with Raman spectroscopy in the presence of operating room light artifacts , 2016, Journal of biomedical optics.

[2]  J. Ferlay,et al.  Global Cancer Statistics, 2002 , 2005, CA: a cancer journal for clinicians.

[3]  T. B. Bakker Schut,et al.  Resection margins in oral cancer surgery: Room for improvement , 2016, Head & neck.

[4]  P. Chaturvedi,et al.  In vivo Raman spectroscopy of oral buccal mucosa: a study on malignancy associated changes (MAC)/cancer field effects (CFE). , 2013, The Analyst.

[5]  T. B. Bakker Schut,et al.  Development and validation of Raman spectroscopic classification models to discriminate tongue squamous cell carcinoma from non-tumorous tissue. , 2016, Oral oncology.

[6]  Atul Deshmukh,et al.  In vivo Raman spectroscopy for oral cancers diagnosis , 2012, Other Conferences.

[7]  J. Darr,et al.  Raman spectroscopic analysis of breast cancer tissues: identifying differences between normal, invasive ductal carcinoma and ductal carcinoma in situ of the breast tissue , 2007 .

[8]  C. Murali Krishna,et al.  Classification of oral cancers using Raman spectroscopy of serum , 2014, Photonics West - Biomedical Optics.

[9]  Andrew L. Maas Rectifier Nonlinearities Improve Neural Network Acoustic Models , 2013 .

[10]  S. Lippman,et al.  Head and Neck Cancer , 1993, Cancer treatment and research.

[11]  P. Chaturvedi,et al.  Anatomical variability of in vivo Raman spectra of normal oral cavity and its effect on oral tissue classification , 2013 .

[12]  Wei Zheng,et al.  Classification of colonic tissues using near-infrared Raman spectroscopy and support vector machines. , 2008, International journal of oncology.

[13]  Jimmy Ba,et al.  Adam: A Method for Stochastic Optimization , 2014, ICLR.

[14]  P. Eilers,et al.  Sign constraints improve the detection of differences between complex spectral data sets: LC-IR as an example. , 2005, Analytical chemistry.

[15]  Aaron Park,et al.  Baseline correction using asymmetrically reweighted penalized least squares smoothing. , 2015, The Analyst.

[16]  I. Rehman,et al.  Raman spectroscopy can discriminate between normal, dysplastic and cancerous oral mucosa: a tissue‐engineering approach , 2017, Journal of tissue engineering and regenerative medicine.

[17]  Airton A. Martin,et al.  Application of principal components analysis to diagnosis hamster oral carcinogenesis: Raman study , 2004, SPIE BiOS.

[18]  Patrick J Clark,et al.  How does the close surgical margin impact recurrence and survival when treating oral squamous cell carcinoma? , 2015, Journal of oral and maxillofacial surgery : official journal of the American Association of Oral and Maxillofacial Surgeons.

[19]  P. Chaturvedi,et al.  Raman spectroscopy of normal oral buccal mucosa tissues: study on intact and incised biopsies. , 2011, Journal of biomedical optics.

[20]  V. B. Kartha,et al.  Micro-Raman Spectroscopy for Optical Pathology of Oral Squamous Cell Carcinoma , 2004, Applied spectroscopy.

[21]  Yoshua Bengio,et al.  Gradient-based learning applied to document recognition , 1998, Proc. IEEE.

[22]  V. B. Kartha,et al.  Discrimination of normal, inflammatory, premalignant, and malignant oral tissue: A Raman spectroscopy study , 2006, Biopolymers.

[23]  C. Krishna,et al.  Optical pathology of oral tissue: A raman spectroscopy diagnostic method , 2001 .

[24]  C Murali Krishna,et al.  Autofluorescence of oral tissue for optical pathology in oral malignancy. , 2004, Journal of photochemistry and photobiology. B, Biology.

[25]  C. Krishna,et al.  Raman mapping of oral tissues for cancer diagnosis , 2014 .

[26]  R. Bedi,et al.  Ethnicity and oral cancer. , 2000, The Lancet. Oncology.

[27]  Haishan Zeng,et al.  Micro-Raman spectroscopy study of cancerous and normal nasopharyngeal tissues , 2013, Journal of biomedical optics.

[28]  Anita Mahadevan-Jansen,et al.  Application of Raman spectroscopy for cervical dysplasia diagnosis , 2009, Journal of biophotonics.

[29]  Bo Li,et al.  Evaluating oral epithelial dysplasia classification system by near-infrared Raman spectroscopy , 2017, Oncotarget.

[30]  S. Rogers,et al.  The prognostic implications of the surgical margin in oral squamous cell carcinoma. , 2003, International journal of oral and maxillofacial surgery.

[31]  S. Devpura,et al.  Diagnosis of head and neck squamous cell carcinoma using Raman spectroscopy: tongue tissues , 2012 .

[32]  H. Zeng,et al.  Parameters defining the potential applicability of Raman spectroscopy as a diagnostic tool for oral disease. , 2009, Journal of biomedical optics.

[33]  J. Woolgar,et al.  A histopathological appraisal of surgical margins in oral and oropharyngeal cancer resection specimens. , 2005, Oral oncology.

[34]  A. Savitzky,et al.  Smoothing and Differentiation of Data by Simplified Least Squares Procedures. , 1964 .