Flexible and Rigid Regions in Proteins

[1]  Donald J. Jacobs,et al.  Generic rigidity in three-dimensional bond-bending networks , 1998 .

[2]  B. Hendrickson,et al.  Regular ArticleAn Algorithm for Two-Dimensional Rigidity Percolation: The Pebble Game , 1997 .

[3]  B. Hendrickson,et al.  An Algorithm for Two-Dimensional Rigidity Percolation , 1997 .

[4]  R Abagyan,et al.  A new method for modeling large‐scale rearrangements of protein domains , 1997, Proteins.

[5]  K. P. Murphy,et al.  Energetics of hydrogen bonding in proteins: A model compound study , 1996, Protein science : a publication of the Protein Society.

[6]  Jacobs,et al.  Generic rigidity percolation in two dimensions. , 1996, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

[7]  John A Tainer,et al.  Crystal Structure and Mutational Analysis of the Human CDK2 Kinase Complex with Cell Cycle–Regulatory Protein CksHs1 , 1996, Cell.

[8]  Jacobs,et al.  Generic rigidity percolation: The pebble game. , 1995, Physical review letters.

[9]  M J Rooman,et al.  Automatic analysis of protein conformational changes by multiple linkage clustering. , 1995, Journal of molecular biology.

[10]  G. Rose,et al.  Rigid domains in proteins: An algorithmic approach to their identification , 1995, Proteins.

[11]  G J Barton,et al.  Continuous and discontinuous domains: An algorithm for the automatic generation of reliable protein domain definitions , 1995, Protein science : a publication of the Protein Society.

[12]  Herschel Rabitz,et al.  Subspace Method for Long Time Scale Molecular Dynamics , 1995 .

[13]  C. Sander,et al.  Parser for protein folding units , 1994, Proteins.

[14]  J. Pandit,et al.  Three-dimensional structures of the periplasmic lysine/arginine/ornithine-binding protein with and without a ligand. , 1994, The Journal of biological chemistry.

[15]  A. Lesk,et al.  Structural mechanisms for domain movements in proteins. , 1994, Biochemistry.

[16]  Ruben Abagyan,et al.  ICM—A new method for protein modeling and design: Applications to docking and structure prediction from the distorted native conformation , 1994, J. Comput. Chem..

[17]  Professor Dr. George A. Jeffrey,et al.  Hydrogen Bonding in Biological Structures , 1991, Springer Berlin Heidelberg.

[18]  K. Dill.  Dominant forces in protein folding. , 1990, Biochemistry.

[19]  J. Troadec,et al.  Non-local and non-linear problems in the mechanics of disordered systems: application to granular media and rigidity problems , 1990 .

[20]  G. Rose,et al.  Compact units in proteins. , 1986, Biochemistry.

[21]  F A Quiocho,et al.  Rates of ligand binding to periplasmic proteins involved in bacterial transport and chemotaxis. , 1983, The Journal of biological chemistry.

[22]  Kurt Wüthrich,et al.  Internal motion in globular proteins , 1978 .

[23]  G. Laman.  On graphs and rigidity of plane skeletal structures , 1970 .

[24]  Frank Harary,et al.  Graph Theory , 2016 .

[25]  Maria Mitkova,et al.  Amorphous insulators and semiconductors , 1997 .

[26]  G. Petsko,et al.  7 – A Consumer’s Guide to Protein Crystallography , 1996 .

[27]  B. Matthews,et al.  Structural and genetic analysis of protein stability. , 1993, Annual review of biochemistry.

[28]  C. Branden,et al.  Introduction to protein structure , 1991 .

[29]  A. Fersht.  The hydrogen bond in molecular recognition , 1987 .

[30]  W. Bennett,et al.  Structural and functional aspects of domain motions in proteins. , 1984, CRC critical reviews in biochemistry.

[31]  J. Janin,et al.  Structural domains in proteins and their role in the dynamics of protein function. , 1983, Progress in biophysics and molecular biology.

[32]  Jessica Daecher.  The Design And Analysis Of Algorithms , 1974 .