The β6 Integrin Negatively Regulates TLR7-Mediated Epithelial Immunity via Autophagy During Influenza A Virus Infection

Integrins are essential surface receptors that sense extracellular changes to initiate various intracellular signaling cascades. The rapid activation of the epithelial-intrinsic β6 integrin during influenza A virus (IAV) infection has been linked to innate immune impairments. Yet, how β6 regulates epithelial immunity remains undefined. Here, we identify the role of β6 in mediating the Toll-like receptor 7 (TLR7) through the regulation of intracellular trafficking. We demonstrate that deletion of the β6 integrin in lung epithelial cells significantly enhances the TLR7-mediated activation of the type I interferon (IFN) response during homeostasis and respiratory infection. IAV-induced β6 facilitates TLR7 trafficking to lysosome-associated membrane protein (LAMP2a) components, leading to a reduction in endosomal compartments and associated TLR7 signaling. Our findings reveal an unappreciated role of β6-induced autophagy in influencing epithelial immune responses during influenza virus infection.

[1]  C. D. Dela Cruz,et al.  Toll-like Receptor-9 Activation Promotes Persistent Inflammation in the Lung During Influenza Infection , 2023, C66. VIRAL INFECTIONS, COVID, AND BEYOND.

[2]  Yamei Gao,et al.  CUR5g, a novel autophagy inhibitor, exhibits potent synergistic anticancer effects with cisplatin against non-small-cell lung cancer , 2022, Cell Death Discovery.

[3]  G. Jenkins,et al.  Goldilocks and the Three Trials: Clinical Trials Targeting the αvβ6 Integrin in Idiopathic Pulmonary Fibrosis , 2022, American journal of respiratory and critical care medicine.

[4]  L. Kristensen,et al.  TLR2 and TLR7 mediate distinct immunopathological and antiviral plasmacytoid dendritic cell responses to SARS‐CoV‐2 infection , 2022, The EMBO journal.

[5]  G. Rogler,et al.  Inhibition of integrin αvβ6 sparks T-cell antitumor response and enhances immune checkpoint blockade therapy in colorectal cancer , 2022, Journal for ImmunoTherapy of Cancer.

[6]  O. Bawa,et al.  TGFβ receptor inhibition unleashes interferon-β production by tumor-associated macrophages and enhances radiotherapy efficacy , 2022, Journal for ImmunoTherapy of Cancer.

[7]  Bin Tang,et al.  The battle for autophagy between host and influenza A virus , 2021, Virulence.

[8]  G. M. Di Guglielmo,et al.  Canonical and Non-canonical TGFβ Signaling Activate Autophagy in an ULK1-Dependent Manner , 2021, Frontiers in Cell and Developmental Biology.

[9]  T. Desai,et al.  Dual inhibition of αvβ6 and αvβ1 reduces fibrogenesis in lung tissue explants from patients with IPF , 2021, Respiratory Research.

[10]  Qian Cai,et al.  Understanding amphisomes. , 2021, The Biochemical journal.

[11]  I. Carvacho,et al.  RGD‐binding integrins and TGF‐β in SARS‐CoV‐2 infections – novel targets to treat COVID‐19 patients? , 2021, Clinical & translational immunology.

[12]  David F. Boyd,et al.  Exuberant fibroblast activity compromises lung function via ADAMTS4 , 2020, Nature.

[13]  Jiyong Zhou,et al.  Influenza A Virus Induces Autophagy by Its Hemagglutinin Binding to Cell Surface Heat Shock Protein 90AA1 , 2020, Frontiers in Microbiology.

[14]  D. Flint,et al.  Translational pharmacology of an inhaled small molecule αvβ6 integrin inhibitor for idiopathic pulmonary fibrosis , 2020, Nature Communications.

[15]  Quanzhen Li,et al.  B Cell αv Integrins Regulate TLR-Driven Autoimmunity , 2020, The Journal of Immunology.

[16]  R. Lee,et al.  First contact: the role of respiratory cilia in host-pathogen interactions in the airways , 2020, American journal of physiology. Lung cellular and molecular physiology.

[17]  C. Proud,et al.  Chloroquine and bafilomycin A mimic lysosomal storage disorders and impair mTORC1 signalling , 2020, Bioscience reports.

[18]  G. M. Di Guglielmo,et al.  Assessing methods to quantitatively validate TGFβ-dependent autophagy , 2020, Biology Open.

[19]  K. Otsu,et al.  Administration of a TLR9 Inhibitor Attenuates the Development and Progression of Heart Failure in Mice , 2019, JACC. Basic to translational science.

[20]  C. Roy,et al.  Manipulation of Host Cell Organelles by Intracellular Pathogens. , 2019, Microbiology spectrum.

[21]  Jon P. Connelly,et al.  CRIS.py: A Versatile and High-throughput Analysis Program for CRISPR-based Genome Editing , 2019, Scientific Reports.

[22]  Jun Zhao,et al.  Crosstalk between Autophagy and Type I Interferon Responses in Innate Antiviral Immunity , 2019, Viruses.

[23]  Huanchun Chen,et al.  Autophagy Promotes Replication of Influenza A Virus In Vitro , 2018, Journal of Virology.

[24]  L. Ho,et al.  The role of respiratory epithelium in host defence against influenza virus infection , 2018, Biomedical journal.

[25]  Xingdong Zhou,et al.  Chloroquine inhibits autophagic flux by decreasing autophagosome-lysosome fusion , 2018, Autophagy.

[26]  M. Albert,et al.  Autophagy diminishes the early interferon-β response to influenza A virus resulting in differential expression of interferon-stimulated genes , 2018, Cell Death & Disease.

[27]  L. Yin,et al.  Integrin αvβ6 Promotes Lung Cancer Proliferation and Metastasis through Upregulation of IL-8–Mediated MAPK/ERK Signaling1 , 2018, Translational oncology.

[28]  H. Fan,et al.  TLR7, a third signal for the robust generation of spontaneous germinal center B cells in systemic lupus erythematosus , 2017, Cellular and Molecular Immunology.

[29]  C. Petes,et al.  The Toll for Trafficking: Toll-Like Receptor 7 Delivery to the Endosome , 2017, Front. Immunol..

[30]  L. Denney,et al.  Epithelial derived TGF-β1 acts as a pro-viral factor in the lung during influenza A infection , 2017, Mucosal Immunology.

[31]  Ming O. Li,et al.  Regulation of the Immune Response by TGF-β: From Conception to Autoimmunity and Infection. , 2017, Cold Spring Harbor perspectives in biology.

[32]  A. Iwasaki,et al.  Early local immune defences in the respiratory tract , 2016, Nature Reviews Immunology.

[33]  D. Sheppard,et al.  An Epithelial Integrin Regulates the Amplitude of Protective Lung Interferon Responses against Multiple Respiratory Pathogens , 2016, PLoS pathogens.

[34]  S. Martens,et al.  Mechanisms of Selective Autophagy , 2016, Journal of molecular biology.

[35]  R. Xavier,et al.  αv Integrins combine with LC3 and atg5 to regulate Toll-like receptor signalling in B cells , 2016, Nature Communications.

[36]  J. Whitsett,et al.  Respiratory epithelial cells orchestrate pulmonary innate immunity , 2014, Nature Immunology.

[37]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[38]  S. Akira,et al.  B Cell–Intrinsic TLR7 Signaling Is Essential for the Development of Spontaneous Germinal Centers , 2014, The Journal of Immunology.

[39]  M. Naylor,et al.  Structural and mechanical functions of integrins , 2014, Biophysical Reviews.

[40]  Akiko Iwasaki,et al.  Innate immunity to influenza virus infection , 2014, Nature Reviews Immunology.

[41]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[42]  Melvin J. Yu,et al.  Novel Small Molecule Inhibitors of TLR7 and TLR9: Mechanism of Action and Efficacy In Vivo , 2014, Molecular Pharmacology.

[43]  Carrie W. Evans,et al.  Global Human-Kinase Screening Identifies Therapeutic Host Targets against Influenza , 2014, Journal of biomolecular screening.

[44]  D. Klionsky,et al.  An overview of autophagy: morphology, mechanism, and regulation. , 2014, Antioxidants & redox signaling.

[45]  P. Doherty,et al.  Highly Pathological Influenza A Virus Infection Is Associated with Augmented Expression of PD-1 by Functionally Compromised Virus-Specific CD8+ T Cells , 2013, Journal of Virology.

[46]  L. Guillot,et al.  Alveolar epithelial cells: master regulators of lung homeostasis. , 2013, The international journal of biochemistry & cell biology.

[47]  Wei Shi,et al.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features , 2013, Bioinform..

[48]  Wei-dong Hu,et al.  Application and interpretation of current autophagy inhibitors and activators , 2013, Acta Pharmacologica Sinica.

[49]  E. Flaño,et al.  Toll-Like Receptor Expression and Induction of Type I and Type III Interferons in Primary Airway Epithelial Cells , 2013, Journal of Virology.

[50]  W. Cao,et al.  TLR7 Recognition Is Dispensable for Influenza Virus A Infection but Important for the Induction of Hemagglutinin-Specific Antibodies in Response to the 2009 Pandemic Split Vaccine in Mice , 2012, Journal of Virology.

[51]  D. Sheppard,et al.  Epithelial cells utilize cortical actin/myosin to activate latent TGF-β through integrin α(v)β(6)-dependent physical force. , 2012, Experimental cell research.

[52]  Hongyan Wang,et al.  Integrin signalling and function in immune cells , 2012, Immunology.

[53]  R. Webby,et al.  Increased Pathogenicity of a Reassortant 2009 Pandemic H1N1 Influenza Virus Containing an H5N1 Hemagglutinin , 2011, Journal of Virology.

[54]  S. Park,et al.  Smad6-specific recruitment of Smurf E3 ligases mediates TGF-β1-induced degradation of MyD88 in TLR4 signalling. , 2011, Nature communications.

[55]  S. Akira,et al.  MyD88 Plays an Essential Role in Inducing B Cells Capable of Differentiating into Antibody-Secreting Cells after Vaccination , 2011, Journal of Virology.

[56]  A. Prince,et al.  Innate immunity in the respiratory epithelium. , 2011, American journal of respiratory cell and molecular biology.

[57]  U. Švajger,et al.  Mechanism of Endosomal TLR Inhibition by Antimalarial Drugs and Imidazoquinolines , 2011, The Journal of Immunology.

[58]  Kenneth W Dunn,et al.  A practical guide to evaluating colocalization in biological microscopy. , 2011, American journal of physiology. Cell physiology.

[59]  R. Hynes,et al.  αv Integrin expression by DCs is required for Th17 cell differentiation and development of experimental autoimmune encephalomyelitis in mice. , 2010, The Journal of clinical investigation.

[60]  Nan Li,et al.  Integrin CD11b negatively regulates TLR-triggered inflammatory responses by activating Syk and promoting degradation of MyD88 and TRIF via Cbl-b , 2010, Nature Immunology.

[61]  J. Di Domizio,et al.  TLR7 stimulation in human plasmacytoid dendritic cells leads to the induction of early IFN-inducible genes in the absence of type I IFN. , 2009, Blood.

[62]  A. DeFranco,et al.  Toll-like receptors activate innate and adaptive immunity by using dendritic cell-intrinsic and -extrinsic mechanisms. , 2008, Immunity.

[63]  V. Deretic,et al.  Toll‐like receptors control autophagy , 2008, The EMBO journal.

[64]  Shizuo Akira,et al.  Signaling to NF-?B by Toll-like receptors , 2007 .

[65]  J. Roes,et al.  Ulcerative colitis and autoimmunity induced by loss of myeloid αv integrins , 2007, Proceedings of the National Academy of Sciences.

[66]  Shohei Koyama,et al.  Differential Role of TLR- and RLR-Signaling in the Immune Responses to Influenza A Virus Infection and Vaccination , 2007, The Journal of Immunology.

[67]  J. Bluestone,et al.  Loss of integrin αvβ8 on dendritic cells causes autoimmunity and colitis in mice , 2007 .

[68]  G. Laurent,et al.  Syk-dependent mTOR activation in follicular lymphoma cells. , 2006, Blood.

[69]  Sarah K. Meadows,et al.  Endogenous Transforming Growth Factor‐β Inhibits Toll‐Like Receptor Mediated Activation of Human Uterine Natural Killer Cells , 2006, American journal of reproductive immunology.

[70]  A. Marshak‐Rothstein Toll-like receptors in systemic autoimmune disease , 2006, Nature Reviews Immunology.

[71]  S. Akira,et al.  Toll-like receptor 7-dependent loss of B cell tolerance in pathogenic autoantibody knockin mice. , 2006, Immunity.

[72]  J. Shupe,et al.  Toll-like receptor 7 and TLR9 dictate autoantibody specificity and have opposing inflammatory and regulatory roles in a murine model of lupus. , 2006, Immunity.

[73]  P. Moynagh TLR signalling and activation of IRFs: revisiting old friends from the NF-kappaB pathway. , 2005, Trends in immunology.

[74]  D. Rifkin,et al.  Integrin αVβ6-mediated activation of latent TGF-β requires the latent TGF-β binding protein-1 , 2004, The Journal of cell biology.

[75]  Francesco Scaravilli,et al.  Inhibition of mTOR induces autophagy and reduces toxicity of polyglutamine expansions in fly and mouse models of Huntington disease , 2004, Nature Genetics.

[76]  Shizuo Akira,et al.  Innate Antiviral Responses by Means of TLR7-Mediated Recognition of Single-Stranded RNA , 2004, Science.

[77]  Shizuo Akira,et al.  Toll/IL-1 Receptor Domain-Containing Adaptor Inducing IFN-β (TRIF) Associates with TNF Receptor-Associated Factor 6 and TANK-Binding Kinase 1, and Activates Two Distinct Transcription Factors, NF-κB and IFN-Regulatory Factor-3, in the Toll-Like Receptor Signaling 1 , 2003, The Journal of Immunology.

[78]  D. Sheppard Functions of pulmonary epithelial integrins: from development to disease. , 2003, Physiological reviews.

[79]  David A. Cheresh,et al.  Role of integrins in cell invasion and migration , 2002, Nature Reviews Cancer.

[80]  J. Anrather,et al.  Regulation of NF-κB RelA Phosphorylation and Transcriptional Activity by p21 ras and Protein Kinase Cζ in Primary Endothelial Cells* , 1999, The Journal of Biological Chemistry.

[81]  N. Kaminski,et al.  A Mechanism for Regulating Pulmonary Inflammation and Fibrosis: The Integrin αvβ6 Binds and Activates Latent TGF β1 , 1999, Cell.

[82]  N. Kaminski,et al.  The integrin alpha v beta 6 binds and activates latent TGF beta 1: a mechanism for regulating pulmonary inflammation and fibrosis. , 1999, Cell.

[83]  A. Krieg,et al.  CpG motifs in bacterial DNA activate leukocytes through the pH-dependent generation of reactive oxygen species. , 1998, Journal of immunology.

[84]  Y. Moriyama,et al.  Bafilomycin A1 prevents maturation of autophagic vacuoles by inhibiting fusion between autophagosomes and lysosomes in rat hepatoma cell line, H-4-II-E cells. , 1998, Cell structure and function.

[85]  L. Manzel,et al.  Antagonism of immunostimulatory CpG-oligodeoxynucleotides by quinacrine, chloroquine, and structurally related compounds. , 1998, Journal of immunology.

[86]  C. Shin,et al.  Airway goblet cell mucin: its structure and regulation of secretion. , 1997, European Respiratory Journal.

[87]  T. Testerman,et al.  Cytokine induction by the immunomodulators imiquimod and S‐27609 , 1995, Journal of leukocyte biology.

[88]  K. Aldape,et al.  Expression of the beta 6 integrin subunit in development, neoplasia and tissue repair suggests a role in epithelial remodeling. , 1995, Journal of cell science.

[89]  D. Sheppard,et al.  Restricted distribution of integrin beta 6 mRNA in primate epithelial tissues. , 1993, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[90]  J. Paulson,et al.  Influenza virus strains selectively recognize sialyloligosaccharides on human respiratory epithelium; the role of the host cell in selection of hemagglutinin receptor specificity. , 1993, Virus research.

[91]  P. Seglen,et al.  Prelysosomal convergence of autophagic and endocytic pathways. , 1988, Biochemical and biophysical research communications.

[92]  J. Connelly,et al.  High-Throughput Analysis of CRISPR-Cas9 Editing Outcomes in Cell and Animal Models Using CRIS.py. , 2023, Methods in molecular biology.

[93]  T. Kuiken,et al.  Pathogenesis of influenza-induced acute respiratory distress syndrome. , 2014, The Lancet. Infectious diseases.

[94]  Thomas R. Gingeras,et al.  STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..

[95]  Y. Furuse,et al.  [Influenza infection]. , 2010, Nihon rinsho. Japanese journal of clinical medicine.

[96]  P. Weinreb,et al.  Inhibition of Integrin αvβ6, an Activator of Latent Transforming Growth Factor-β, Prevents Radiation-induced Lung Fibrosis , 2008 .

[97]  Nicola J. Rinaldi,et al.  Partial Inhibition of Integrin αvβ6 Prevents Pulmonary Fibrosis without Exacerbating Inflammation , 2008 .

[98]  Robert V Farese,et al.  Inactivation of the Integrin [36 Subunit Gene Reveals a Role of Epithelial Integrins in Regulating Inflammation in the Lungs and Skin , 2002 .

[99]  K. Michelsen,et al.  Transforming Growth Factor- (cid:1) Differentially Inhibits MyD88-dependent, but Not TRAM- and TRIF-dependent, Lipopolysaccharide-induced TLR4 Signaling* , 2005 .