Development of an RNA interference ( RNAi ) gene knockdown protocol 13 in the anaerobic gut fungus Pecoramyces ruminantium strain C 1 A 14 15

[1]  S. Jaiswal.  Effect of zinc and vitamin E supplementation on production performance of lactating buffaloes , 2019, Buffalo Bulletin.

[2]  H. Atiyeh,et al.  Utilizing Anaerobic Fungi for Two-stage Sugar Extraction and Biofuel Production from Lignocellulosic Biomass , 2017, Front. Microbiol..

[3]  Christina A. Cuomo,et al.  Genomic innovations linked to infection strategies across emerging pathogenic chytrid fungi , 2017, Nature Communications.

[4]  C. Cogoni,et al.  MicroRNA in Control of Gene Expression: An Overview of Nuclear Functions , 2016, International journal of molecular sciences.

[5]  N. Youssef,et al.  Insights into the Utility of the Focal Adhesion Scaffolding Proteins in the Anaerobic Fungus Orpinomyces sp. C1A , 2016, PloS one.

[6]  B. Chattoo,et al.  Skp1, a component of E3 ubiquitin ligase, is necessary for growth, sporulation, development and pathogenicity in rice blast fungus (Magnaporthe oryzae). , 2016, Molecular plant pathology.

[7]  N. Youssef,et al.  Defined enzyme cocktail from the anaerobic fungus Orpinomyces sp. strain C1A effectively releases sugars from pretreated corn stover and switchgrass , 2016, Scientific Reports.

[8]  Xiaowen Shen,et al.  Fiber degradation potential of natural co-cultures of Neocallimastix frontalis and Methanobrevibacter ruminantium isolated from yaks (Bos grunniens) grazing on the Qinghai Tibetan Plateau. , 2016, Anaerobe.

[9]  Kevin V. Solomon,et al.  Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes , 2016, Science.

[10]  X. Hao,et al.  Bioaugmentation with an anaerobic fungus in a two-stage process for biohydrogen and biogas production using corn silage and cattail. , 2015, Bioresource technology.

[11]  Michael Ott,et al.  De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity , 2013 .

[12]  M. B. Couger,et al.  The Genome of the Anaerobic Fungus Orpinomyces sp. Strain C1A Reveals the Unique Evolutionary History of a Remarkable Plant Biomass Degrader , 2013, Applied and Environmental Microbiology.

[13]  Jing Zhang,et al.  Role of NOD2 in regulating the immune response to Aspergillus fumigatus , 2012, Inflammation Research.

[14]  E. Ullu,et al.  The emerging world of small silencing RNAs in protozoan parasites. , 2011, Trends in parasitology.

[15]  N. Magan,et al.  Control of Aflatoxin Production of Aspergillus flavus and Aspergillus parasiticus Using RNA Silencing Technology by Targeting aflD (nor-1) Gene , 2011, Toxins.

[16]  Davis J. McCarthy,et al.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..

[17]  M. Vincentz,et al.  dsRNA-induced gene silencing in Moniliophthora perniciosa, the causal agent of witches' broom disease of cacao. , 2009, Fungal genetics and biology : FG & B.

[18]  Q. Sun,et al.  A single Argonaute gene is required for induction of RNA silencing antiviral defense and promotes viral RNA recombination , 2009, Proceedings of the National Academy of Sciences.

[19]  B. Paterson,et al.  Identification of an RNA-dependent RNA polymerase in Drosophila involved in RNAi and transposon suppression , 2009, Proceedings of the National Academy of Sciences.

[20]  Y. Hadar,et al.  Gene Silencing by RNA Interference in the White Rot Fungus Phanerochaete chrysosporium , 2008, Applied and Environmental Microbiology.

[21]  F. Nicolás,et al.  A RING-finger photocarotenogenic repressor involved in asexual sporulation in Mucor circinelloides. , 2008, FEMS microbiology letters.

[22]  C. Scazzocchio,et al.  RNA Silencing Gene Truncation in the Filamentous Fungus Aspergillus nidulans , 2007, Eukaryotic Cell.

[23]  V. K. Tripathi,et al.  Effect of administration of anaerobic fungi isolated from cattle and wild blue bull ( Boselaphus tragocamelus ) on growth rate and fibre utilization in buffalo calves , 2007, Archives of animal nutrition.

[24]  Yi Liu,et al.  QIP, a putative exonuclease, interacts with the Neurospora Argonaute protein and facilitates conversion of duplex siRNA into single strands. , 2007, Genes & development.

[25]  M. Eder,et al.  RNA-Mediated Gene Silencing in Hematopoietic Cells , 2006, Journal of biomedicine & biotechnology.

[26]  F. Hamada,et al.  Knockdown of LIM15/DMC1 in the mushroom Coprinus cinereus by double-stranded RNA-mediated gene silencing. , 2005, Microbiology.

[27]  T. Hammond,et al.  RNA Silencing in Aspergillus nidulans Is Independent of RNA-Dependent RNA Polymerases , 2005, Genetics.

[28]  T. Rana,et al.  siRNA function in RNAi: a chemical modification analysis. , 2003, RNA.

[29]  B. Li,et al.  Expression profiling reveals off-target gene regulation by RNAi , 2003, Nature Biotechnology.

[30]  T. Doering,et al.  RNA interference in Cryptococcus neoformans. , 2012, Methods in molecular biology.

[31]  A. Sharon,et al.  Electroporation and Agrobacterium-mediated spore transformation. , 2010, Methods in molecular biology.

[32]  G. Carmichael,et al.  RNA Silencing , 2005, Methods in Molecular Biology™.

[33]  A. K. Puniya,et al.  Influence of an Anaerobic Fungal Culture (Orpinomyces sp.) Administration on Growth Rate, Ruminal Fermentation and Nutrient Digestion in Calves , 2004 .