Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation.
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K. Schulten | Hui Lu | H. Lu | B. Isralewitz | A. Krammer | V. Vogel | H. Lu
[1] I. Brown,et al. Empirical parameters for calculating cation–oxygen bond valences , 1976 .
[2] G J Williams,et al. The Protein Data Bank: a computer-based archival file for macromolecular structures. , 1978, Archives of biochemistry and biophysics.
[3] G J Williams,et al. The Protein Data Bank: a computer-based archival file for macromolecular structures. , 1978, Archives of biochemistry and biophysics.
[4] W. L. Jorgensen,et al. Comparison of simple potential functions for simulating liquid water , 1983 .
[5] N. Go. Theoretical studies of protein folding. , 1983, Annual review of biophysics and bioengineering.
[6] Axel T. Brunger,et al. X-PLOR Version 3.1: A System for X-ray Crystallography and NMR , 1992 .
[7] J. Thornton,et al. Identification, classification, and analysis of beta‐bulges in proteins , 1993, Protein science : a publication of the Protein Society.
[8] K. Wang,et al. Viscoelasticity of the sarcomere matrix of skeletal muscles. The titin-myosin composite filament is a dual-stage molecular spring. , 1993, Biophysical journal.
[9] A. Pastore,et al. Immunoglobulin-type domains of titin: same fold, different stability? , 1994, Biochemistry.
[10] H. Erickson,et al. Reversible unfolding of fibronectin type III and immunoglobulin domains provides the structural basis for stretch and elasticity of titin and fibronectin. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[11] M. Nayal,et al. Predicting Ca(2+)-binding sites in proteins. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[12] C Chothia,et al. Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains. , 1994, Journal of molecular biology.
[13] Frederick P. Brooks,et al. Computing smooth molecular surfaces , 1994, IEEE Computer Graphics and Applications.
[14] B. Honig,et al. Classical electrostatics in biology and chemistry. , 1995, Science.
[15] A. Pastore,et al. The folding and stability of titin immunoglobulin-like modules, with implications for the mechanism of elasticity. , 1995, Biophysical journal.
[16] M Karplus,et al. Theoretical studies of protein folding and unfolding. , 1995, Current opinion in structural biology.
[17] Siegfried Labeit,et al. Titins: Giant Proteins in Charge of Muscle Ultrastructure and Elasticity , 1995, Science.
[18] A. Pastore,et al. Tertiary structure of an immunoglobulin-like domain from the giant muscle protein titin: a new member of the I set. , 1995, Structure.
[19] A. Mark,et al. Computational approaches to study protein unfolding: Hen egg white lysozyme as a case study , 1995, Proteins.
[20] A. Pastore,et al. Secondary structure determination by NMR spectroscopy of an immunoglobulin-like domain from the giant muscle protein titin , 1995, Journal of biomolecular NMR.
[21] P. Tavan,et al. Ligand Binding: Molecular Mechanics Calculation of the Streptavidin-Biotin Rupture Force , 1996, Science.
[22] W. Linke,et al. Towards a molecular understanding of the elasticity of titin. , 1996, Journal of molecular biology.
[23] K Schulten,et al. VMD: visual molecular dynamics. , 1996, Journal of molecular graphics.
[24] Elastic properties of single titin molecules made visible through fluorescent F-actin binding. , 1996, Biochemical and biophysical research communications.
[25] H. Granzier,et al. Nonuniform elasticity of titin in cardiac myocytes: a study using immunoelectron microscopy and cellular mechanics. , 1996, Biophysical journal.
[26] Laxmikant V. Kalé,et al. NAMD: a Parallel, Object-Oriented Molecular Dynamics Program , 1996, Int. J. High Perform. Comput. Appl..
[27] A. Pastore,et al. Immunoglobulin-like modules from titin I-band: extensible components of muscle elasticity. , 1996, Structure.
[28] J. Wolff,et al. cDNA sequence of rabbit cardiac titin/connectin. , 1996, Advances in biophysics.
[29] A. Li,et al. Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations. , 1996, Journal of molecular biology.
[30] Jan F. Prins,et al. SMD: visual steering of molecular dynamics for protein design , 1996 .
[31] K. Schulten,et al. Binding pathway of retinal to bacterio-opsin: a prediction by molecular dynamics simulations. , 1997, Biophysical journal.
[32] E. Evans,et al. Dynamic strength of molecular adhesion bonds. , 1997, Biophysical journal.
[33] M. Rief,et al. Reversible unfolding of individual titin immunoglobulin domains by AFM. , 1997, Science.
[34] W. Linke,et al. The Giant Protein Titin: Emerging Roles in Physiology and Pathophysiology , 1997 .
[35] K. Schulten,et al. Extraction of Lipids from Phospholipid Membranes by Steered Molecular Dynamics , 1997 .
[36] K. Maruyama,et al. Connectin/titin, giant elastic protein of muscle , 1997, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[37] R. M. Simmons,et al. Elasticity and unfolding of single molecules of the giant muscle protein titin , 1997, Nature.
[38] Frederick P. Brooks,et al. Linearly Scalable Computation of Smooth Molecular Surfaces , 1997 .
[39] J Tirado-Rives,et al. Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea. , 1997, Biochemistry.
[40] V. Muñoz,et al. Folding dynamics and mechanism of β-hairpin formation , 1997, Nature.
[41] V Muñoz,et al. Folding dynamics and mechanism of beta-hairpin formation. , 1997, Nature.
[42] H. Granzier,et al. Titin elasticity and mechanism of passive force development in rat cardiac myocytes probed by thin-filament extraction. , 1997, Biophysical journal.
[43] S. Smith,et al. Folding-unfolding transitions in single titin molecules characterized with laser tweezers. , 1997, Science.
[44] K. Schulten,et al. Molecular dynamics study of unbinding of the avidin-biotin complex. , 1997, Biophysical journal.
[45] K Schulten,et al. Reconstructing potential energy functions from simulated force-induced unbinding processes. , 1997, Biophysical journal.
[46] Andres F. Oberhauser,et al. The molecular elasticity of the extracellular matrix protein tenascin , 1998, Nature.
[47] Klaus Schulten,et al. Steered Molecular Dynamics , 1999, Computational Molecular Dynamics.