CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome
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Igor Jurisica | Paul C. Boutros | Peggy J. Farnham | Neil Winegarden | Rod Bremner | James R. Woodgett | Patrick Yau | John D. Watson | Linda Z. Penn | P. Boutros | I. Jurisica | P. Farnham | N. Winegarden | J. Woodgett | L. Heisler | L. Penn | T. Huang | S. Der | P. Yau | R. Bremner | D. Torti | Lawrence E. Heisler | Charles Q. C. Chan | Mark Takahashi | Dax Torti | Tim H.-M. Huang | Sandy D. Der | John Watson | Charles Chan | Mark Takahashi | Lawrence E Heisler
[1] Tim Hui-Ming Huang,et al. Differential distribution of DNA methylation within the RASSF1A CpG island in breast cancer. , 2003, Cancer research.
[2] Jean YH Yang,et al. Bioconductor: open software development for computational biology and bioinformatics , 2004, Genome Biology.
[3] Tim Hui-Ming Huang,et al. Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis. , 2002, Genes & development.
[4] F. Wardle,et al. Identifying transcriptional targets , 2004, Genome Biology.
[5] Kirby D. Johnson,et al. Measurement of protein-DNA interactions in vivo by chromatin immunoprecipitation. , 2004, Methods in molecular biology.
[6] T. Efferth,et al. Use of CpG island microarrays to identify colorectal tumors with a high degree of concurrent methylation. , 2002, Methods.
[7] S. Knudsen,et al. A new non-linear normalization method for reducing variability in DNA microarray experiments , 2002, Genome Biology.
[8] Nicola J. Rinaldi,et al. Control of Pancreas and Liver Gene Expression by HNF Transcription Factors , 2004, Science.
[9] L. Kuras. Characterization of protein-DNA association in vivo by chromatin immunoprecipitation. , 2004, Methods in molecular biology.
[10] John J. Wyrick,et al. Genome-wide location and function of DNA binding proteins. , 2000, Science.
[11] Pearlly Yan,et al. Chromatin Immunoprecipitation (ChIP) on Chip Experiments Uncover a Widespread Distribution of NF-Y Binding CCAAT Sites Outside of Core Promoters* , 2005, Journal of Biological Chemistry.
[12] Michael Q. Zhang,et al. Large-scale human promoter mapping using CpG islands , 2000, Nature Genetics.
[13] Michael Q. Zhang,et al. A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[14] Martin W. Simmen,et al. CpG island libraries from human Chromosomes 18 and 22: landmarks for novel genes , 2000, Mammalian Genome.
[15] M. Frommer,et al. CpG islands in vertebrate genomes. , 1987, Journal of molecular biology.
[16] M. Gerstein,et al. GATA-1 binding sites mapped in the β-globin locus by using mammalian chIp-chip analysis , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[17] A. Bird,et al. Number of CpG islands and genes in human and mouse. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[18] Peggy J. Farnham,et al. Analysis of Myc Bound Loci Identified by CpG Island Arrays Shows that Max Is Essential for Myc-Dependent Repression , 2003, Current Biology.
[19] Tim Hui-Ming Huang,et al. Differential methylation hybridization using CpG island arrays. , 2002, Methods in molecular biology.
[20] F. Antequera,et al. Structure, function and evolution of CpG island promoters , 2003, Cellular and Molecular Life Sciences CMLS.
[21] Toshio Kojima,et al. Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression , 2004, BMC Genomics.
[22] Patrick Yau,et al. High-throughput screening of chromatin immunoprecipitates using CpG-island microarrays. , 2004, Methods in enzymology.
[23] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[24] S. Cross,et al. Isolation of CpG islands from large genomic clones. , 1999, Nucleic acids research.
[25] Michael Q. Zhang,et al. Use of Chromatin Immunoprecipitation To Clone Novel E2F Target Promoters , 2001, Molecular and Cellular Biology.
[26] S. Cawley,et al. Unbiased Mapping of Transcription Factor Binding Sites along Human Chromosomes 21 and 22 Points to Widespread Regulation of Noncoding RNAs , 2004, Cell.
[27] T. Volkert,et al. E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints. , 2002, Genes & development.
[28] Thomas E. Royce,et al. Global Identification of Human Transcribed Sequences with Genome Tiling Arrays , 2004, Science.
[29] A. Bird,et al. The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[30] Gordon K Smyth,et al. Statistical Applications in Genetics and Molecular Biology Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments , 2011 .
[31] W. J. Kent,et al. BLAT--the BLAST-like alignment tool. , 2002, Genome research.
[32] A. Bird. DNA methylation patterns and epigenetic memory. , 2002, Genes & development.
[33] Daiya Takai,et al. Comprehensive analysis of CpG islands in human chromosomes 21 and 22 , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[34] T. Huang,et al. Methylation profiling of CpG islands in human breast cancer cells. , 1999, Human molecular genetics.
[35] C. M. Chen,et al. Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays. , 2001, Cancer research.
[36] S. Cross,et al. Purification of CpG islands using a methylated DNA binding column , 1994, Nature Genetics.
[37] Terrence S. Furey,et al. The UCSC Genome Browser Database , 2003, Nucleic Acids Res..
[38] Bradley P. Coe,et al. A tiling resolution DNA microarray with complete coverage of the human genome , 2004, Nature Genetics.