Fabrication of Carbohydrate Surfaces by Using Nonderivatised Oligosaccharides, and their Application to Measuring the Assembly of Sugar–Protein Complexes

This way up. Dual polarisation interferometry was used to design and characterise a surface on which the orientation and density of immobilised carbohydrates was suitable for studying their interactions with proteins. Lactoferrin was shown to adopt two orientations: “end‐on” or “side‐on”, while for FGF‐2 a single monolayer of protein was observed. The new surface can be used to elucidate the binding of proteins to carbohydrates and the geometry of the complexes, a frequently controversial area.

[1]  D. Heinegård,et al.  The Amino-terminal Part of PRELP Binds to Heparin and Heparan Sulfate* , 2000, The Journal of Biological Chemistry.

[2]  Stuart Brand,et al.  A new quantitative optical biosensor for protein characterisation. , 2003, Biosensors & bioelectronics.

[3]  Christopher J. Robinson,et al.  Evidence That Heparin Saccharides Promote FGF2 Mitogenesis through Two Distinct Mechanisms* , 2008, Journal of Biological Chemistry.

[4]  C. Groom,et al.  Three-dimensional structure of diferric bovine lactoferrin at 2.8 A resolution. , 1997, Journal of molecular biology.

[5]  D. Clarke,et al.  Site-specific interactions of copper(II) ions with heparin revealed with complementary (SRCD, NMR, FTIR and EPR) spectroscopic techniques. , 2008, Carbohydrate research.

[6]  J. Turnbull Analytical and preparative strong anion-exchange HPLC of heparan sulfate and heparin saccharides. , 2001, Methods in molecular biology.

[7]  D. Mann,et al.  Delineation of the glycosaminoglycan-binding site in the human inflammatory response protein lactoferrin. , 1994, The Journal of biological chemistry.

[8]  K. Holme,et al.  Marked stereoselectivity in the binding of copper ions by heparin. Contrasts with the binding of gadolinium and calcium ions. , 1990, Carbohydrate research.

[9]  P. N. Shaklee,et al.  Absolute molecular weight distribution of low-molecular-weight heparins by size-exclusion chromatography with multiangle laser light scattering detection. , 1997, Analytical biochemistry.

[10]  Sungjin Park and,et al.  Fabrication of Carbohydrate Chips for Studying Protein–Carbohydrate Interactions† , 2002 .

[11]  D. Monroe,et al.  Characterization of the glycosaminoglycan-binding region of lactoferrin. , 1995, Archives of biochemistry and biophysics.

[12]  Chi‐Huey Wong,et al.  Synthesis of sugar arrays in microtiter plate. , 2002, Journal of the American Chemical Society.

[13]  D. Colavizza,et al.  Molecular cloning and sequence analysis of bovine lactotransferrin. , 1991, European journal of biochemistry.

[14]  W. Kett,et al.  Protein-heparin interactions measured by BIAcore 2000 are affected by the method of heparin immobilization. , 2002, Analytical biochemistry.

[15]  Chi-Huey Wong,et al.  Printed covalent glycan array for ligand profiling of diverse glycan binding proteins. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[16]  A. Ori,et al.  The heparanome and regulation of cell function: structures, functions and challenges. , 2008, Frontiers in bioscience : a journal and virtual library.

[17]  D. Spillmann,et al.  Microarrays of heparin oligosaccharides obtained by nitrous acid depolymerization of isolated heparin. , 2006, Chemical communications.

[18]  B. Matthews,et al.  Three-dimensional structure of human basic fibroblast growth factor. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[19]  D. Clarke,et al.  Protein-GAG interactions: new surface-based techniques, spectroscopies and nanotechnology probes. , 2006, Biochemical Society transactions.

[20]  P. Mead,et al.  cDNA and protein sequence of bovine lactoferrin. , 1990, Nucleic acids research.

[21]  N. Freeman,et al.  Quantification of the effects of melittin on liposome structure. , 2005, Biochemical Society transactions.

[22]  J. Mcmahon,et al.  Oligosaccharide and glycoprotein microarrays as tools in HIV glycobiology; glycan-dependent gp120/protein interactions. , 2004, Chemistry & biology.

[23]  Milan Mrksich,et al.  Carbohydrate arrays for the evaluation of protein binding and enzymatic modification. , 2002, Chemistry & biology.

[24]  D. Legrand,et al.  The binding of lactoferrin to glycosaminoglycans on enterocyte-like HT29-18-C1 cells is mediated through basic residues located in the N-terminus. , 2001, Biochimica et biophysica acta.

[25]  K. Mikawa,et al.  Properties of a heparin-binding peptide derived from bovine lactoferrin. , 1998, Journal of dairy science.

[26]  Injae Shin,et al.  Fabrication of carbohydrate chips for studying protein-carbohydrate interactions. , 2002, Angewandte Chemie.

[27]  F. Chen,et al.  Lithographic techniques and surface chemistries for the fabrication of PEG-passivated protein microarrays. , 2006, Biosensors & bioelectronics.

[28]  G. Pejler Lactoferrin regulates the activity of heparin proteoglycan-bound mast cell chymase: characterization of the binding of heparin to lactoferrin. , 1996, The Biochemical journal.

[29]  O. Melnyk,et al.  Polysaccharide Microarrays for Polysaccharide–Platelet‐Derived‐Growth‐Factor Interaction Studies , 2006, Chembiochem : a European journal of chemical biology.

[30]  S. vandeVondele,et al.  Peptide functionalized poly(L-lysine)-g-poly(ethylene glycol) on titanium: resistance to protein adsorption in full heparinized human blood plasma. , 2003, Biomaterials.

[31]  J. Peter-Katalinic,et al.  Coupling of fully automated chip electrospray to Fourier transform ion cyclotron resonance mass spectrometry for high-performance glycoscreening and sequencing. , 2004, Rapid communications in mass spectrometry : RCM.

[32]  A. Blom,et al.  Structural and Energetic Characteristics of the Heparin-binding Site in Antithrombotic Protein C* , 2001, The Journal of Biological Chemistry.

[33]  H Lortat-Jacob,et al.  Pentosan Polysulfate as an Inhibitor of Extracellular HIV-1 Tat* , 2001, The Journal of Biological Chemistry.

[34]  J. Mikkelsen,et al.  Sugar‐coated microarrays: A novel slide surface for the high‐throughput analysis of glycans , 2002, Proteomics.

[35]  J. Smith,et al.  A rapid procedure for production of human basic fibroblast growth factor in Escherichia coli cells. , 1992, Biochimica et biophysica acta.

[36]  M. Forster,et al.  N.m.r. and molecular-modelling studies of the solution conformation of heparin. , 1993, The Biochemical journal.

[37]  P. Rudland,et al.  Fibroblast growth factor-2 binds to small heparin-derived oligosaccharides and stimulates a sustained phosphorylation of p42/44 mitogen-activated protein kinase and proliferation of rat mammary fibroblasts. , 2002, The Biochemical journal.

[38]  Graham H. Cross,et al.  YOUNG'S FRINGES FROM VERTICALLY INTEGRATED SLAB WAVEGUIDES : APPLICATIONS TO HUMIDITY SENSING , 1999 .

[39]  J. Turnbull,et al.  Specific heparan sulfate saccharides mediate the activity of basic fibroblast growth factor. , 1994, The Journal of biological chemistry.

[40]  G. Brown,et al.  Oligosaccharides derived by keratanase II digestion of bovine articular cartilage keratan sulphates. , 1994, European journal of biochemistry.

[41]  J. Turnbull,et al.  Attachment of glycosaminoglycan oligosaccharides to thiol-derivatised gold surfaces. , 2004, Chemical communications.

[42]  W. Hurley,et al.  Heparin-binding properties of lactoferrin and lysozyme. , 1992, Comparative biochemistry and physiology. B, Comparative biochemistry.

[43]  J. Turnbull,et al.  Fabrication of carbohydrate microarrays on gold surfaces: direct attachment of nonderivatized oligosaccharides to hydrazide-modified self-assembled monolayers. , 2006, Analytical chemistry.

[44]  J. Brock Lactoferrin: a multifunctional immunoregulatory protein? , 1995, Immunology today.

[45]  H. J. Griesser,et al.  Interactions between adsorbed lactoferrin layers measured directly with the atomic force microscope , 2002 .

[46]  B H Schneider,et al.  Highly sensitive optical chip immunoassays in human serum. , 2000, Biosensors & bioelectronics.

[47]  M. Mrksich,et al.  Maleimide-Functionalized Self-Assembled Monolayers for the Preparation of Peptide and Carbohydrate Biochips† , 2003 .

[48]  P. V. Berkel,et al.  Structure and biological actions of lactoferrin , 1996, Journal of Mammary Gland Biology and Neoplasia.

[49]  C. Costello,et al.  N-Glycans of Caenorhabditis elegans Are Specific to Developmental Stages* , 2005, Journal of Biological Chemistry.

[50]  Joseph F. Clark,et al.  Apolipoprotein E isoprotein-specific interactions with tissue plasminogen activator. , 2004, Biochimica et biophysica acta.

[51]  Milan Mrksich,et al.  Probing Protein–Carbohydrate Interactions with Microarrays of Synthetic Oligosaccharides , 2004, Chembiochem : a European journal of chemical biology.

[52]  G. Brown,et al.  Keratanase digestion of keratan sulphates: characterization of large oligosaccharides from the N-acetyllactosamine repeat sequence and from the non-reducing terminal chain caps. , 1995, Biochimica et biophysica acta.