OCT4 cooperates with distinct ATP-dependent chromatin remodelers in naïve and primed pluripotent states in human
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R. Jaenisch | S. Dietmann | Ting Wang | Jianlong Wang | T. W. Theunissen | X. Xing | Pavel V. Shliaha | S. Khan | Cigall Kadoch | S. Imsoonthornruksa | J. Ding | Joshua Pan | Dan Li | Xin Huang | Kyoung-mi Park | Laura A. Fischer | M. Mitalipova | Jihong Yang | Tenzin Lungjangwa | P. Gontarz | L. Fischer | Zachary M. McKenzie | Bo Zhang | Chen Dong | Nick Jensen | Kyoung-mi Park | T. Theunissen | Sumeth Imsoonthornruksa | Junjun Ding
[1] J. Nichols,et al. Naive stem cell blastocyst model captures human embryo lineage segregation , 2021, Cell stem cell.
[2] G. Hon,et al. Blastocyst-like structures generated from human pluripotent stem cells , 2021, Nature.
[3] I. Okamoto,et al. Capturing Human Trophoblast Development with Naïve Pluripotent Stem Cells In Vitro , 2020, bioRxiv.
[4] Stéphanie Kilens,et al. Induction of Human Trophoblast Stem Cells from Somatic Cells and Pluripotent Stem Cells. , 2020, Cell reports.
[5] Qi Zhou,et al. Overcoming Autocrine FGF Signaling-Induced Heterogeneity in Naive Human ESCs Enables Modeling of Random X Chromosome Inactivation. , 2020, Cell stem cell.
[6] Ting Wang,et al. Derivation of trophoblast stem cells from naïve human pluripotent stem cells , 2020, eLife.
[7] J. Nichols,et al. Human Naïve Epiblast Cells Possess Unrestricted Lineage Potential , 2020, bioRxiv.
[8] Yanhui Xu,et al. Structure of nucleosome-bound human BAF complex , 2020, Science.
[9] Yun Zheng,et al. A developmental landscape of 3D-cultured human pre-gastrulation embryos , 2019, Nature.
[10] K. Anderson,et al. Naïve human pluripotent stem cells respond to Wnt, Nodal and LIF signalling to produce expandable naïve extra-embryonic endoderm , 2019, Development.
[11] S. Dietmann,et al. Wnt Inhibition Facilitates RNA-Mediated Reprogramming of Human Somatic Cells to Naive Pluripotency , 2019, Stem cell reports.
[12] G. Sanguinetti,et al. Multi-omics profiling of mouse gastrulation at single cell resolution , 2019, Nature.
[13] M. Shokhirev,et al. Heterozygous Mutations in SMARCA2 Reprogram the Enhancer Landscape by Global Retargeting of SMARCA4. , 2019, Molecular cell.
[14] Ting Wang,et al. Improving ATAC-seq Data Analysis with AIAP, a Quality Control and Integrative Analysis Package , 2019, bioRxiv.
[15] R. Jaenisch,et al. Hominoid-Specific Transposable Elements and KZFPs Facilitate Human Embryonic Genome Activation and Control Transcription in Naive Human ESCs , 2019, Cell stem cell.
[16] Michael B. Stadler,et al. Mammalian ISWI and SWI/SNF selectively mediate binding of distinct transcription factors , 2019, Nature.
[17] Hatice S. Kaya-Okur,et al. CUT&Tag for efficient epigenomic profiling of small samples and single cells , 2019, Nature Communications.
[18] D. Cacchiarelli,et al. Direct generation of human naive induced pluripotent stem cells from somatic cells in microfluidics , 2018, Nature Cell Biology.
[19] J. Ranish,et al. Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes , 2018, Cell.
[20] A. Sharrocks,et al. ZIC3 Controls the Transition from Naive to Primed Pluripotency , 2018, bioRxiv.
[21] Xuepeng Wang,et al. Chromatin analysis in human early development reveals epigenetic transition during ZGA , 2018, Nature.
[22] William A. Pastor,et al. TFAP2C regulates transcription in human naive pluripotency by opening enhancers , 2018, Nature Cell Biology.
[23] Hong Wang,et al. Unique molecular events during reprogramming of human somatic cells to induced pluripotent stem cells (iPSCs) at naïve state , 2018, eLife.
[24] T. Mikkelsen,et al. Parallel derivation of isogenic human primed and naive induced pluripotent stem cells , 2018, Nature Communications.
[25] Ge Guo,et al. Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast , 2017, Development.
[26] R. Lister,et al. Comprehensive characterization of distinct states of human naive pluripotency generated by reprogramming , 2017, Nature Methods.
[27] Daesik Kim,et al. Genome editing reveals a role for OCT4 in human embryogenesis , 2017, Nature.
[28] T. Magnuson,et al. Co-regulation of transcription by BRG1 and BRM, two mutually exclusive SWI/SNF ATPase subunits , 2017, bioRxiv.
[29] Paul Bertone,et al. Epigenetic resetting of human pluripotency , 2017, Development.
[30] S. Petropoulos,et al. Comprehensive Cell Surface Protein Profiling Identifies Specific Markers of Human Naive and Primed Pluripotent States , 2017, Cell stem cell.
[31] Munazah Andrabi,et al. ChIP-seq analysis of genomic binding regions of five major transcription factors highlights a central role for ZIC2 in the mouse epiblast stem cell gene regulatory network , 2017, Development.
[32] R. Klose,et al. The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells , 2017, eLife.
[33] Jason D. Buenrostro,et al. TOP2 synergizes with BAF chromatin remodeling for both resolution and formation of facultative heterochromatin , 2017, Nature Structural &Molecular Biology.
[34] Austin G Smith. Formative pluripotency: the executive phase in a developmental continuum , 2017, Development.
[35] R. Jaenisch,et al. Human Naive Pluripotent Stem Cells Model X Chromosome Dampening and X Inactivation. , 2017, Cell stem cell.
[36] N. Frydman,et al. XACT Noncoding RNA Competes with XIST in the Control of X Chromosome Activity during Human Early Development , 2017, Cell stem cell.
[37] R. Jaenisch,et al. Molecular Criteria for Defining the Naive Human Pluripotent State , 2016, Cell stem cell.
[38] Jianlong Wang,et al. Zfp281 Coordinates Opposing Functions of Tet1 and Tet2 in Pluripotent States. , 2016, Cell stem cell.
[39] I. Okamoto,et al. A developmental coordinate of pluripotency among mice, monkeys and humans , 2016, Nature.
[40] B. Bruneau,et al. ATP-dependent chromatin remodeling during mammalian development , 2016, Development.
[41] J. Nichols,et al. Naive Pluripotent Stem Cells Derived Directly from Isolated Cells of the Human Inner Cell Mass , 2016, Stem cell reports.
[42] Sigal Shachar,et al. 3D Chromosome Regulatory Landscape of Human Pluripotent Cells. , 2016, Cell stem cell.
[43] Ying Jin,et al. Comprehensive profiling reveals mechanisms of SOX2-mediated cell fate specification in human ESCs and NPCs , 2016, Cell Research.
[44] A. Meissner,et al. Ground State Conditions Induce Rapid Reorganization of Core Pluripotency Factor Binding before Global Epigenetic Reprogramming. , 2015, Cell stem cell.
[45] G. Crabtree,et al. Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics , 2015, Science Advances.
[46] R. Lahesmaa,et al. The L1TD1 Protein Interactome Reveals the Importance of Post-transcriptional Regulation in Human Pluripotency , 2015, Stem cell reports.
[47] W. Reik,et al. Redundant mechanisms to form silent chromatin at pericentromeric regions rely on BEND3 and DNA methylation. , 2014, Molecular cell.
[48] G. Fan,et al. The naive state of human pluripotent stem cells: a synthesis of stem cell and preimplantation embryo transcriptome analyses. , 2014, Cell stem cell.
[49] J. Nichols,et al. Resetting Transcription Factor Control Circuitry toward Ground-State Pluripotency in Human , 2014, Cell.
[50] R. Mailman,et al. Transcriptional Repression by the BRG1-SWI/SNF Complex Affects the Pluripotency of Human Embryonic Stem Cells , 2014, Stem cell reports.
[51] R. Young,et al. Systematic Identification of Culture Conditions for Induction and Maintenance of Naive Human Pluripotency , 2014, Cell stem cell.
[52] A. Radzisheuskaya,et al. Do all roads lead to Oct4? The emerging concepts of induced pluripotency , 2014, Trends in cell biology.
[53] Amber L. Couzens,et al. The CRAPome: a Contaminant Repository for Affinity Purification Mass Spectrometry Data , 2013, Nature Methods.
[54] S. Bultman,et al. Combined gene dosage requirement for SWI/SNF catalytic subunits during early mammalian development , 2013, Mammalian Genome.
[55] W. Reik,et al. Nanog-dependent function of Tet1 and Tet2 in establishment of pluripotency , 2013, Nature.
[56] Avi Ma’ayan,et al. Oct4 links multiple epigenetic pathways to the pluripotency network , 2011, Cell Research.
[57] Jennifer A. Erwin,et al. Derivation of Pre-X Inactivation Human Embryonic Stem Cells under Physiological Oxygen Concentrations , 2010, Cell.
[58] Debbie L C van den Berg,et al. An Oct4-Centered Protein Interaction Network in Embryonic Stem Cells , 2010, Cell stem cell.
[59] Marcos J. Araúzo-Bravo,et al. Direct reprogramming of human neural stem cells by OCT4 , 2009, Nature.
[60] J. Nichols,et al. Naive and primed pluripotent states. , 2009, Cell stem cell.
[61] Jonghwan Kim,et al. Use of in vivo biotinylation to study protein–protein and protein–DNA interactions in mouse embryonic stem cells , 2009, Nature Protocols.
[62] Alexey I Nesvizhskii,et al. An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency , 2009, Proceedings of the National Academy of Sciences.
[63] N. D. Clarke,et al. Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells , 2008, Cell.
[64] S. Orkin,et al. An Extended Transcriptional Network for Pluripotency of Embryonic Stem Cells , 2008, Cell.
[65] J. Kiefer,et al. Back to basics: Sox genes , 2007, Developmental dynamics : an official publication of the American Association of Anatomists.
[66] M. Trotter,et al. Derivation of pluripotent epiblast stem cells from mammalian embryos , 2007, Nature.
[67] R. McKay,et al. New cell lines from mouse epiblast share defining features with human embryonic stem cells , 2007, Nature.
[68] Stuart H. Orkin,et al. A protein interaction network for pluripotency of embryonic stem cells , 2006, Nature.
[69] X. Chen,et al. The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells , 2006, Nature Genetics.
[70] Megan F. Cole,et al. Core Transcriptional Regulatory Circuitry in Human Embryonic Stem Cells , 2005, Cell.
[71] W. Funkhouser,et al. The Expression of the SWI/SNF ATPase Subunits BRG1 and BRM in Normal Human Tissues , 2005, Applied immunohistochemistry & molecular morphology : AIMM.
[72] A. Skoultchi,et al. The ISWI ATPase Snf2h is required for early mouse development , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[73] F Randazzo,et al. A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes. , 2000, Molecular cell.
[74] J. Miyazaki,et al. Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells , 2000, Nature Genetics.
[75] H. Schöler,et al. Formation of Pluripotent Stem Cells in the Mammalian Embryo Depends on the POU Transcription Factor Oct4 , 1998, Cell.
[76] C. Muchardt,et al. Differential preimplantation regulation of two mouse homologues of the yeast SWI2 protein , 1998, Developmental dynamics : an official publication of the American Association of Anatomists.
[77] Weiqi Zhang,et al. Generation of iPSCs from mouse fibroblasts with a single gene, Oct4, and small molecules , 2011, Cell Research.
[78] 李耀华,et al. Continuum:越多元,越精彩 , 2011 .