Minimum message length inference of secondary structure from protein coordinate data
暂无分享,去创建一个
Lloyd Allison | Arun Siddharth Konagurthu | Arthur M. Lesk | A. Konagurthu | A. Lesk | L. Allison | A. S. Konagurthu
[1] J. Gibrat,et al. Protein secondary structure assignment revisited: a detailed analysis of different assignment methods , 2005, BMC Structural Biology.
[2] Burkhard Rost,et al. Secondary structure assignment. , 2003, Methods of biochemical analysis.
[3] Arthur M Lesk,et al. Contact patterns between helices and strands of sheet define protein folding patterns , 2007, Proteins.
[4] C. S. Wallace,et al. An Information Measure for Classification , 1968, Comput. J..
[5] G J Barton,et al. Evaluation and improvement of multiple sequence methods for protein secondary structure prediction , 1999, Proteins.
[6] C. S. Wallace,et al. Statistical and Inductive Inference by Minimum Message Length (Information Science and Statistics) , 2005 .
[7] J. Rissanen. A UNIVERSAL PRIOR FOR INTEGERS AND ESTIMATION BY MINIMUM DESCRIPTION LENGTH , 1983 .
[8] W R Taylor,et al. Defining linear segments in protein structure. , 2001, Journal of molecular biology.
[9] Jean-François Sadoc,et al. Protein secondary structure assignment through Voronoï tessellation , 2004, Proteins.
[10] S. F.R.,et al. An Essay towards solving a Problem in the Doctrine of Chances . By the late Rev . Mr . Bayes , communicated by Mr . Price , in a letter to , 1999 .
[11] W. Kabsch,et al. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features , 1983, Biopolymers.
[12] S M King,et al. Assigning secondary structure from protein coordinate data , 1999, Proteins.
[13] F. Richards,et al. Identification of structural motifs from protein coordinate data: Secondary structure and first‐level supersecondary structure * , 1988, Proteins.
[14] Peter J. Stuckey,et al. Piecewise linear approximation of protein structures using the principle of minimum message length , 2011, Bioinform..
[15] S. Kearsley. On the orthogonal transformation used for structural comparisons , 1989 .
[16] P. Argos,et al. Knowledge‐based protein secondary structure assignment , 1995, Proteins.
[17] Robert W. Janes,et al. 2Struc: the secondary structure server , 2010, Bioinform..
[18] L. Pauling,et al. Configurations of Polypeptide Chains With Favored Orientations Around Single Bonds: Two New Pleated Sheets. , 1951, Proceedings of the National Academy of Sciences of the United States of America.
[19] R. Lavery,et al. Describing protein structure: A general algorithm yielding complete helicoidal parameters and a unique overall axis , 1989, Proteins.
[20] N. Colloc'h,et al. Comparison of three algorithms for the assignment of secondary structure in proteins: the advantages of a consensus assignment. , 1993, Protein engineering.
[21] E. B. Andersen,et al. Information Science and Statistics , 1986 .
[22] R. Srinivasan,et al. A physical basis for protein secondary structure. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[23] Peter J. Stuckey,et al. Structural search and retrieval using a tableau representation of protein folding patterns , 2008, Bioinform..
[24] Charles F. Hockett,et al. A mathematical theory of communication , 1948, MOCO.
[25] S. Al-Karadaghi,et al. Occurrence, conformational features and amino acid propensities for the pi-helix. , 2002, Protein engineering.
[26] J. Richardson,et al. The anatomy and taxonomy of protein structure. , 1981, Advances in protein chemistry.
[27] M. Levitt,et al. Automatic identification of secondary structure in globular proteins. , 1977, Journal of molecular biology.
[28] N. Sloane,et al. On the Voronoi Regions of Certain Lattices , 1984 .
[29] A M Lesk,et al. Computer-generated schematic diagrams of protein structures. , 1982, Science.
[30] Joël Pothier,et al. P-SEA: a new efficient assignment of secondary structure from C alpha trace of proteins , 1997, Comput. Appl. Biosci..
[31] Nick V. Grishin,et al. PALSSE: A program to delineate linear secondary structural elements from protein structures , 2005, BMC Bioinformatics.
[32] Sang Joon Kim,et al. A Mathematical Theory of Communication , 2006 .
[33] C. E. SHANNON,et al. A mathematical theory of communication , 1948, MOCO.
[34] Barry Robson,et al. Introduction to proteins and protein engineering , 1986 .
[35] A Keith Dunker,et al. Assessing secondary structure assignment of protein structures by using pairwise sequence‐alignment benchmarks , 2008, Proteins.
[36] T. Bayes. An essay towards solving a problem in the doctrine of chances , 2003 .