Template-O-Matic: A toolbox for creating customized pediatric templates

Processing pediatric neuroimaging data is a challenge due to pervasive morphological changes that occur in the human brain during normal development. This is of special relevance when reference data is used as part of the processing approach, as in spatial normalization and tissue segmentation. Current approaches construct reference data (templates) by averaging brain images from a control group of subjects, or by creating custom templates from the group under study. In this technical note, we describe a new, and generalized method of constructing such appropriate reference data by statistically analyzing a large sample (n=404) of healthy children, as acquired during the NIH MRI study of normal brain development. After eliminating non-contributing demographic variables, we modeled the effects of age (first, second, and third-order terms) and gender, for each voxel in gray matter and white matter. By appropriate weighting with the parameter estimates from these analyses, complete tissue maps can be generated automatically from this database to match a pediatric population selected for study. The algorithm is implemented in the form of a toolbox for the SPM5 image data processing suite, which we term Template-O-Matic. We compare the performance of this approach with the current method of template generation and discuss the implications of our approach.

[1]  S. White Conceptual Foundations Of Iq Testing , 2000 .

[2]  Daniel Rueckert,et al.  A Dynamic Brain Atlas , 2002, MICCAI.

[3]  A. Anderson,et al.  Regional brain volumes and their later neurodevelopmental correlates in term and preterm infants. , 2003, Pediatrics.

[4]  A. Schleicher,et al.  Asymmetry in the Human Motor Cortex and Handedness , 1996, NeuroImage.

[5]  Arthur W. Toga,et al.  A Probabilistic Atlas of the Human Brain: Theory and Rationale for Its Development The International Consortium for Brain Mapping (ICBM) , 1995, NeuroImage.

[6]  Rex E. Jung,et al.  Distributed brain sites for the g-factor of intelligence , 2006, NeuroImage.

[7]  Ingeborg Krägeloh-Mann,et al.  Global and local development of gray and white matter volume in normal children and adolescents , 2007, Experimental Brain Research.

[8]  Thanh-Thu T. Tran,et al.  Hippocampal atrophy confounds template-based functional MR imaging measures of hippocampal activation in patients with mild cognitive impairment. , 2006, AJNR. American journal of neuroradiology.

[9]  Isaac N. Bankman,et al.  Handbook of medical image processing and analysis , 2009 .

[10]  Paul M. Thompson,et al.  Asymmetries of cortical shape: Effects of handedness, sex and schizophrenia , 2007, NeuroImage.

[11]  Marko Wilke,et al.  Variability of gray and white matter during normal development: a voxel-based MRI analysis , 2003, Neuroreport.

[12]  Ron Kikinis,et al.  Medical Image Computing and Computer-Assisted Intervention — MICCAI 2002 , 2002, Lecture Notes in Computer Science.

[13]  E. Darcy Burgund,et al.  Comparison of functional activation foci in children and adults using a common stereotactic space , 2003, NeuroImage.

[14]  Scott K Holland,et al.  Practical Aspects of Conducting Large-Scale Functional Magnetic Resonance Imaging Studies in Children , 2002, Journal of child neurology.

[15]  Imran A. Pirwani,et al.  Introduction to the Non-rigid Image Registration Evaluation Project (NIREP) , 2006, WBIR.

[16]  J Mazziotta,et al.  A probabilistic atlas and reference system for the human brain: International Consortium for Brain Mapping (ICBM). , 2001, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[17]  V. Schmithorst,et al.  Cognitive functions correlate with white matter architecture in a normal pediatric population: A diffusion tensor MRI study , 2005, Human brain mapping.

[18]  Dirk Vandermeulen,et al.  Linear normalization of MR brain images in pediatric patients with periventricular leukomalacia , 2007, NeuroImage.

[19]  Meritxell Bach Cuadra,et al.  Comparison and validation of tissue modelization and statistical classification methods in T1-weighted MR brain images , 2005, IEEE Transactions on Medical Imaging.

[20]  A. Reiss,et al.  Brain development, gender and IQ in children. A volumetric imaging study. , 1996, Brain : a journal of neurology.

[21]  Alan C. Evans,et al.  Developmental trajectories of brain volume abnormalities in children and adolescents with attention-deficit/hyperactivity disorder. , 2002, JAMA.

[22]  Alan C. Evans,et al.  The NIH MRI study of normal brain development , 2006, NeuroImage.

[23]  Rex E. Jung,et al.  Structural brain variation and general intelligence , 2004, NeuroImage.

[24]  Marko Wilke,et al.  Bright spots: correlations of gray matter volume with IQ in a normal pediatric population , 2003, NeuroImage.

[25]  E. Goodman,et al.  A prospective study of the role of depression in the development and persistence of adolescent obesity. , 2002, Pediatrics.

[26]  Guy B. Williams,et al.  The impact of skull-stripping and radio-frequency bias correction on grey-matter segmentation for voxel-based morphometry , 2008, NeuroImage.

[27]  M. Reite,et al.  Regional gray matter volumetric changes in autism associated with social and repetitive behavior symptoms , 2006, BMC psychiatry.

[28]  R. C. Oldfield The assessment and analysis of handedness: the Edinburgh inventory. , 1971, Neuropsychologia.

[29]  J. Ashburner,et al.  Nonlinear spatial normalization using basis functions , 1999, Human brain mapping.

[30]  Brain Development Cooperative Group,et al.  The NIH MRI study of normal brain development (Objective-2): Newborns, infants, toddlers, and preschoolers , 2007, NeuroImage.

[31]  Joshua Aronson,et al.  The cultural malleability of intelligence and its impact on the racial/ethnic hierarchy , 2005 .

[32]  H. Engeland,et al.  Variability in spatial normalization of pediatric and adult brain images , 2005, Clinical Neurophysiology.

[33]  Thomas F. Nugent,et al.  Dynamic mapping of human cortical development during childhood through early adulthood. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[34]  K. Ishii,et al.  Statistical brain mapping of 18F-FDG PET in Alzheimer's disease: validation of anatomic standardization for atrophied brains. , 2001, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[35]  Stephan Eliez,et al.  Developmental trajectories of brain structure in adolescents with 22q11.2 deletion syndrome: A longitudinal study , 2007, Schizophrenia Research.

[36]  Scott Holland,et al.  Infant brain probability templates for MRI segmentation and normalization , 2008, NeuroImage.

[37]  Stephan Eliez,et al.  From genes to brain: understanding brain development in neurogenetic disorders using neuroimaging techniques. , 2007, Child and adolescent psychiatric clinics of North America.

[38]  J. S. Lee,et al.  Development of Korean Standard Brain Templates , 2005, Journal of Korean medical science.

[39]  F. Schmitt,et al.  Age and gender effects on human brain anatomy: A voxel-based morphometric study in healthy elderly , 2007, Neurobiology of Aging.

[40]  Eileen Daly,et al.  Brain and behaviour in children with 22q11.2 deletion syndrome: a volumetric and voxel-based morphometry MRI study. , 2006, Brain : a journal of neurology.

[41]  Karl J. Friston,et al.  Cerebral Asymmetry and the Effects of Sex and Handedness on Brain Structure: A Voxel-Based Morphometric Analysis of 465 Normal Adult Human Brains , 2001, NeuroImage.

[42]  Tyrone D. Cannon,et al.  Genetic influences on brain structure , 2001, Nature Neuroscience.

[43]  Marko Wilke,et al.  Structural MR Imaging Studies of the Brain in Children: Issues and Opportunities , 2008, Neuroembryology and Aging.

[44]  R. Hauser,et al.  Measuring socioeconomic status in studies of child development. , 1994, Child development.

[45]  Derek K. Jones,et al.  The effect of filter size on VBM analyses of DT-MRI data , 2005, NeuroImage.

[46]  Bernard Mazoyer,et al.  Handedness and cerebral anatomical asymmetries in young adult males , 2006, NeuroImage.

[47]  Abraham Z. Snyder,et al.  The Feasibility of a Common Stereotactic Space for Children and Adults in fMRI Studies of Development , 2002, NeuroImage.

[48]  B. J. Casey,et al.  Quantitative magnetic resonance imaging of human brain development: ages 4-18. , 1996, Cerebral cortex.

[49]  A. Sandler,et al.  A prospective study of the role of depression in the development and persistence of adolescent obesity. , 2003 .

[50]  John C. Mazziotta,et al.  A Probabilistic Atlas and Reference System for the Human Brain , 2001 .

[51]  Marko Wilke,et al.  Assessment of spatial normalization of whole‐brain magnetic resonance images in children , 2002, Human brain mapping.

[52]  M Wilke,et al.  Normative pediatric brain data for spatial normalization and segmentation differs from standard adult data , 2003, Magnetic resonance in medicine.

[53]  Karl J. Friston,et al.  Unified segmentation , 2005, NeuroImage.

[54]  Judith Rumsey,et al.  The NIH MRI study of normal brain development: Performance of a population based sample of healthy children aged 6 to 18 years on a neuropsychological battery , 2007, Journal of the International Neuropsychological Society.

[55]  Karl J. Friston,et al.  Voxel-Based Morphometry—The Methods , 2000, NeuroImage.

[56]  Karl J. Friston,et al.  Distributional Assumptions in Voxel-Based Morphometry , 2002, NeuroImage.

[57]  Paul M. Thompson,et al.  Sexual dimorphism of brain developmental trajectories during childhood and adolescence , 2007, NeuroImage.

[58]  O. Muzik,et al.  Statistical Parametric Mapping: Assessment of Application in Children , 2000, NeuroImage.

[59]  Jean-Baptiste Poline,et al.  Analysis of a large fMRI cohort: Statistical and methodological issues for group analyses , 2007, NeuroImage.

[60]  John Ashburner,et al.  A fast diffeomorphic image registration algorithm , 2007, NeuroImage.

[61]  Arthur W. Toga,et al.  Brain Image Analysis and Atlas Construction , 2000 .

[62]  Karl J. Friston,et al.  How Many Subjects Constitute a Study? , 1999, NeuroImage.