Halotolerant bacteria in the São Paulo Zoo composting process and their hydrolases and bioproducts

Halophilic microorganisms are able to grow in the presence of salt and are also excellent source of enzymes and biotechnological products, such as exopolysaccharides (EPSs) and polyhydroxyalkanoates (PHAs). Salt-tolerant bacteria were screened in the Organic Composting Production Unit (OCPU) of São Paulo Zoological Park Foundation, which processes 4 ton/day of organic residues including plant matter from the Atlantic Rain Forest, animal manure and carcasses and mud from water treatment. Among the screened microorganisms, eight halotolerant bacteria grew at NaCl concentrations up to 4 M. These cultures were classified based on phylogenetic characteristics and comparative partial 16S rRNA gene sequence analysis as belonging to the genera Staphylococcus, Bacillus and Brevibacterium. The results of this study describe the ability of these halotolerant bacteria to produce some classes of hydrolases, namely, lipases, proteases, amylases and cellulases, and biopolymers. The strain characterized as of Brevibacterium avium presented cellulase and amylase activities up to 4 M NaCl and also produced EPSs and PHAs. These results indicate the biotechnological potential of certain microorganisms recovered from the composting process, including halotolerant species, which have the ability to produce enzymes and biopolymers, offering new perspectives for environmental and industrial applications.

[1]  J. Setubal,et al.  Metagenomic Analysis of a Tropical Composting Operation at the São Paulo Zoo Park Reveals Diversity of Biomass Degradation Functions and Organisms , 2013, PloS one.

[2]  M. A. Prieto,et al.  Making Green Polymers Even Greener:Towards Sustainable Production of Polyhydroxyalkanoates from Agroindustrial By-Products , 2012 .

[3]  H. Klenk,et al.  Bacillus hemicentroti sp. nov., a moderate halophile isolated from a sea urchin. , 2011, International journal of systematic and evolutionary microbiology.

[4]  Gennaro Roberto Abbamondi,et al.  Synthesis, Production, and Biotechnological Applications of Exopolysaccharides and Polyhydroxyalkanoates by Archaea , 2011, Archaea.

[5]  C. Litchfield Potential for industrial products from the halophilic Archaea , 2011, Journal of Industrial Microbiology & Biotechnology.

[6]  L. Juliano,et al.  Amylolytic Microorganism from São Paulo Zoo Composting: Isolation, Identification, and Amylase Production , 2011, Enzyme research.

[7]  A. Marsaioli,et al.  The potential for hydrocarbon biodegradation and production of extracellular polymeric substances by aerobic bacteria isolated from a Brazilian petroleum reservoir , 2011, World journal of microbiology & biotechnology.

[8]  Xin Li,et al.  Extracellular production of beta-amylase by a halophilic isolate, Halobacillus sp. LY9 , 2011, Journal of Industrial Microbiology & Biotechnology.

[9]  Shukun Tang,et al.  Bacillus hunanensis sp. nov., a slightly halophilic bacterium isolated from non-saline forest soil , 2011, Antonie van Leeuwenhoek.

[10]  K. Aoki,et al.  Molecular Cloning and Sequence Analysis of Two Distinct Halotolerant Extracellular Proteases from Bacillus subtilis FP-133 , 2011, Bioscience, biotechnology, and biochemistry.

[11]  S. Tanasupawat,et al.  Identification of moderately halophilic bacteria from Thai fermented fish ( pla-ra ) and proposal of Virgibacillus siamensis sp. nov. , 2010, The Journal of general and applied microbiology.

[12]  C. Drainas,et al.  Bacillus halochares sp. nov., a halophilic bacterium isolated from a solar saltern. , 2010, International journal of systematic and evolutionary microbiology.

[13]  Wonyong Kim,et al.  Bacillus chungangensis sp. nov., a halophilic species isolated from sea sand. , 2010, International journal of systematic and evolutionary microbiology.

[14]  K. Zangger,et al.  Identification of polyhydroxyalkanoates in Halococcus and other haloarchaeal species , 2010, Applied Microbiology and Biotechnology.

[15]  P. Auvinen,et al.  Bacterial diversity at different stages of the composting process , 2010, BMC Microbiology.

[16]  S. Gurunathan,et al.  Synthesis of PHB nanoparticles from optimized medium utilizing dairy industrial waste using Brevibacterium casei SRKP2: a green chemistry approach. , 2009, Colloids and surfaces. B, Biointerfaces.

[17]  S. P. Zanotto,et al.  Screening of bacteria to produce polyhydroxyalkanoates from xylose , 2009 .

[18]  A. Boudabous,et al.  Biological control of grey mould in strawberry fruits by halophilic bacteria , 2009, Journal of applied microbiology.

[19]  M. Amoozegar,et al.  Screening and isolation of halophilic bacteria producing extracellular hydrolyses from Howz Soltan Lake, Iran , 2009, Journal of Industrial Microbiology & Biotechnology.

[20]  M. Vidyasagar,et al.  Production, purification, and characterization of two extremely halotolerant, thermostable, and alkali-stable α-amylases from Chromohalobacter sp. TVSP 101 , 2009 .

[21]  S. Voget,et al.  Characterization of a metagenome-derived halotolerant cellulase. , 2006, Journal of biotechnology.

[22]  P. Schloss,et al.  Tracking temporal changes of bacterial community fingerprints during the initial stages of composting. , 2003, FEMS microbiology ecology.

[23]  H. Chua,et al.  The Biodegradation of 1,3-Dichlorobenzene by an Adapted Strain Bacillus cereus PF-11 Derived from Town-Gas Industrial Effluent , 2003, Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering.

[24]  A. Ventosa,et al.  Diversity of moderately halophilic bacteria producing extracellular hydrolytic enzymes. , 2003, Journal of applied microbiology.

[25]  Eugene Rosenberg,et al.  Biosurfactants and oil bioremediation. , 2002, Current opinion in biotechnology.

[26]  Q. Beg,et al.  Bacterial alkaline proteases: molecular approaches and industrial applications , 2002, Applied Microbiology and Biotechnology.

[27]  J. Barros-Velázquez,et al.  Characterization of biogenic amine-producing Stenotrophomonas maltophilia strains isolated from white muscle of fresh and frozen albacore tuna , 2000 .

[28]  L. Fleck,et al.  Physiological aspects of hydrocarbon emulsification, metal resistance and DNA profile of biodegrading bacteria isolated from oil polluted sites , 2000, Biotechnology Letters.

[29]  Philip Hugenholtz,et al.  Microbial Diversity in a Hydrocarbon- and Chlorinated-Solvent-Contaminated Aquifer Undergoing Intrinsic Bioremediation , 1998, Applied and Environmental Microbiology.

[30]  Antonio Ventosa,et al.  Biology of Moderately Halophilic Aerobic Bacteria , 1998, Microbiology and Molecular Biology Reviews.

[31]  G. Lyberatos,et al.  Biodegradation of p-aminoazobenzene by Bacillus subtilis under aerobic conditions , 1997, Journal of Industrial Microbiology and Biotechnology.

[32]  R. Amann,et al.  Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis , 1996, Journal of bacteriology.

[33]  J. Chun,et al.  A phylogenetic analysis of the genus Nocardia with 16S rRNA gene sequences. , 1995, International journal of systematic bacteriology.

[34]  L. Pastrana,et al.  Lipases and esterases from extremophiles: overview and case example of the production and purification of an esterase from Thermus thermophilus HB27. , 2012, Methods in molecular biology.

[35]  Yanhe Ma,et al.  Effects of salts on activity of halophilic cellulase with glucomannanase activity isolated from alkaliphilic and halophilic Bacillus sp. BG-CS10 , 2011, Extremophiles.

[36]  M. Enache,et al.  Hydrolytic enzymes of halophilic microorganisms and their economic values. , 2010 .

[37]  S. Nagata,et al.  Efficient utilization of ectoine by halophilic Brevibacterium species and Escherichia coli subjected to osmotic downshock. , 2005, Journal of bioscience and bioengineering.

[38]  H. Schlegel,et al.  The isolation of mutants not accumulating poly-β-hydroxybutyric acid , 2004, Archiv für Mikrobiologie.

[39]  P. Yu,et al.  Microbial production of polyhydroxyalkanoates by bacteria isolated from oil wastes. , 2000, Applied biochemistry and biotechnology.

[40]  J. J. Nieto,et al.  Biotechnological applications and potentialities of halophilic microorganisms , 1995, World journal of microbiology & biotechnology.

[41]  D. Kushner Life in high salt and solute concentrations: halophilic bacteria , 1978 .

[42]  H. Schlegel,et al.  The isolation of mutants not accumulating poly-beta-hydroxybutyric acid. , 1970, Archiv fur Mikrobiologie.