Detection of Action Potentials in the Presence of Noise Using Phase-Space Techniques

Emerging Bio-engineering fields such as Brain Computer Interfaces, neuroprothesis devices and modeling and simulation of neural networks have led to increased research activity in algorithms for the detection, isolation and classification of Action Potentials (AP) from noisy data trains. Current techniques in the field of ‘unsupervised no-prior knowledge’ biosignal processing include energy operators, wavelet detection and adaptive thresholding. These tend to bias towards larger AP waveforms, AP may be missed due to deviations in spike shape and frequency and correlated noise spectrums can cause false detection. Also, such algorithms tend to suffer from large computational expense. A new signal detection technique based upon the ideas of phasespace diagrams and trajectories is proposed based upon the use of a delayed copy of the AP to highlight discontinuities relative to background noise. This idea has been used to create algorithms that are computationally inexpensive and address the above problems. Distinct AP have been picked out and manually classified from real physiological data recorded from a cockroach. To facilitate testing of the new technique, an Auto Regressive Moving Average (ARMA) noise model has been constructed bases upon background noise of the recordings. Along with the AP classification means this model enables generation of realistic neuronal data sets at arbitrary signal to noise ratio (SNR). Keywords—Action potential detection, Low SNR, Phase space diagrams/trajectories, Unsupervised/no-prior knowledge.

[1]  Po-Lei Lee,et al.  Implementation of Pipelined FastICA on FPGA for Real-Time Blind Source Separation , 2008, IEEE Transactions on Neural Networks.

[2]  Shih-Tseng Lee,et al.  Detection of neuronal spikes using an adaptive threshold based on the max–min spread sorting method , 2008, Journal of Neuroscience Methods.

[3]  R.R. Harrison,et al.  A Low-Power Integrated Circuit for a Wireless 100-Electrode Neural Recording System , 2006, IEEE Journal of Solid-State Circuits.

[4]  H. Chan,et al.  Classification of neuronal spikes over the reconstructed phase space , 2008, Journal of Neuroscience Methods.

[5]  Richard Ian Curry,et al.  Development and modelling of a versatile active micro-electrode array for high density in-vivo and in-vitro neural signal investigation , 2010 .

[6]  Sung June Kim,et al.  A wavelet-based method for action potential detection from extracellular neural signal recording with low signal-to-noise ratio , 2003, IEEE Transactions on Biomedical Engineering.

[7]  Awais M. Kamboh,et al.  Area-Power Efficient VLSI Implementation of Multichannel DWT for Data Compression in Implantable Neuroprosthetics , 2007, IEEE Transactions on Biomedical Circuits and Systems.

[8]  Taejeong Kim,et al.  A new action potential detector using the MTEO and its effects on spike sorting systems at low signal-to-noise ratios , 2006, IEEE Transactions on Biomedical Engineering.

[9]  A. S. Thoke,et al.  International Journal of Electrical and Computer Engineering 3:16 2008 Fault Classification of Double Circuit Transmission Line Using Artificial Neural Network , 2022 .

[10]  U. Frey,et al.  A CMOS-based microelectrode array for interaction with neuronal cultures , 2007, Journal of Neuroscience Methods.

[11]  Sung June Kim,et al.  Neural spike sorting under nearly 0-dB signal-to-noise ratio using nonlinear energy operator and artificial neural-network classifier , 2000, IEEE Transactions on Biomedical Engineering.

[12]  Luca Citi,et al.  On the use of wavelet denoising and spike sorting techniques to process electroneurographic signals recorded using intraneural electrodes , 2008, Journal of Neuroscience Methods.

[13]  I.E. Magnin,et al.  SIMONE: A Realistic Neural Network Simulator to Reproduce MEA-Based Recordings , 2008, IEEE Transactions on Neural Systems and Rehabilitation Engineering.

[14]  Jong-Ho Choi,et al.  Neural action potential detector using multi-resolution TEO , 2002 .

[15]  Patrick D Wolf,et al.  A single-chip signal processing and telemetry engine for an implantable 96-channel neural data acquisition system , 2007, Journal of neural engineering.

[16]  Leslie S. Smith,et al.  Smoothing and thresholding in neuronal spike detection , 2006, Neurocomputing.

[17]  Khoa N. Le,et al.  Noise Reduction in Rhythmic and Multitrial Biosignals With Applications to Event-Related Potentials , 2008, IEEE Transactions on Biomedical Engineering.

[18]  Leslie S. Smith,et al.  A tool for synthesizing spike trains with realistic interference , 2007, Journal of Neuroscience Methods.

[19]  Igor V Tetko,et al.  An unsupervised automatic method for sorting neuronal spike waveforms in awake and freely moving animals. , 2003, Methods.