Content-based medical image retrieval by spatial matching of visual words

Abstract Content-Based Image Retrieval (CBIR) systems have recently emerged as one of the most promising and best image retrieval paradigms. To pacify the semantic gap associated with CBIR systems, the Bag of Visual Words (BoVW) techniques are now increasingly used. However, existing BoVW techniques fail to capture the location information of visual words effectively. This paper proposes an unsupervised Content-Based Medical Image Retrieval (CBMIR) framework based on the spatial matching of the visual words. The proposed method efficiently computes the spatial similarity of visual words using a novel similarity measure called the Skip Similarity Index. Experiments on three large medical datasets reveal promising results. The location-based correlation of visual words assists in more accurate and efficient retrieval of anatomically diverse and multimodal medical images than the state-of-the-art CBMIR systems.

[1]  Thomas Mensink,et al.  Image Classification with the Fisher Vector: Theory and Practice , 2013, International Journal of Computer Vision.

[2]  Marcin Wozniak,et al.  Automated fluorescence microscopy image analysis of Pseudomonas aeruginosa bacteria in alive and dead stadium , 2018, Eng. Appl. Artif. Intell..

[3]  Georg Langs,et al.  Superpixel-Based Interest Points for Effective Bags of Visual Words Medical Image Retrieval , 2011, MCBR-CDS.

[4]  Julius T. Tou,et al.  Pattern Recognition Principles , 1974 .

[5]  C H Cao,et al.  The research on medical image classification algorithm based on PLSA-BOW model. , 2016, Technology and health care : official journal of the European Society for Engineering and Medicine.

[6]  Tieniu Tan,et al.  Salient coding for image classification , 2011, CVPR 2011.

[7]  Tieniu Tan,et al.  Group encoding of local features in image classification , 2012, Proceedings of the 21st International Conference on Pattern Recognition (ICPR2012).

[8]  P. Müller,et al.  Characterizing Cancer-Specific Networks by Integrating TCGA Data , 2014, Cancer informatics.

[9]  Sung Wook Baik,et al.  Medical Image Retrieval with Compact Binary Codes Generated in Frequency Domain Using Highly Reactive Convolutional Features , 2018, Journal of Medical Systems.

[10]  Degui Xiao,et al.  Medical Image Retrieval: A Multimodal Approach , 2014, Cancer informatics.

[11]  S. Miwa,et al.  Practical use of imaging technique for management of bone and soft tissue tumors. , 2017, Journal of orthopaedic science : official journal of the Japanese Orthopaedic Association.

[12]  Muhammad Awais,et al.  Medical image retrieval using deep convolutional neural network , 2017, Neurocomputing.

[13]  Geoffrey E. Hinton,et al.  ImageNet classification with deep convolutional neural networks , 2012, Commun. ACM.

[14]  Synho Do,et al.  How much data is needed to train a medical image deep learning system to achieve necessary high accuracy , 2015, 1511.06348.

[15]  D. S. Guru,et al.  Multimedia Processing, Communication and Computing Applications , 2013 .

[16]  Daekeun You,et al.  Literature-based biomedical image classification and retrieval , 2015, Comput. Medical Imaging Graph..

[17]  T. Caliński,et al.  A dendrite method for cluster analysis , 1974 .

[18]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[19]  T M Lehmann,et al.  Content-based Image Retrieval in Medical Applications , 2004, Methods of Information in Medicine.

[20]  Henning Müller,et al.  Fusion Techniques in Biomedical Information Retrieval , 2014, Fusion in Computer Vision.

[21]  Patrick M. Pilarski,et al.  First steps towards an intelligent laser welding architecture using deep neural networks and reinforcement learning , 2014 .

[22]  David G. Lowe,et al.  Distinctive Image Features from Scale-Invariant Keypoints , 2004, International Journal of Computer Vision.

[23]  M. Pumberger,et al.  Dual-energy CT virtual non-calcium technique for detection of bone marrow edema in patients with vertebral fractures: A prospective feasibility study on a single- source volume CT scanner. , 2017, European journal of radiology.

[24]  Michael Riegler,et al.  KVASIR: A Multi-Class Image Dataset for Computer Aided Gastrointestinal Disease Detection , 2017, MMSys.

[25]  A. Sydow Tou, J. T./Gonzalez, R. C., Pattern Recognition Principles, London-Amsterdam-Dom Mills, Ontario-Sydney-Tokyo. Addison-Wesley Publishing Company. 1974. 378 S., $ 19,50 . , 1977 .

[26]  David B. Dunson,et al.  Probabilistic topic models , 2012, Commun. ACM.

[27]  Yang Gao,et al.  Content-Based Image Retrieval Using Spatial Layout Information in Brain Tumor T1-Weighted Contrast-Enhanced MR Images , 2014, PloS one.

[28]  Qianjin Feng,et al.  Content-Based Retrieval of Focal Liver Lesions Using Bag-of-Visual-Words Representations of Single- and Multiphase Contrast-Enhanced CT Images , 2012, Journal of Digital Imaging.

[29]  F. McNeill,et al.  Confirming improved detection of gadolinium in bone using in vivo XRF. , 2017, Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine.

[30]  Lina J. Karam,et al.  Understanding how image quality affects deep neural networks , 2016, 2016 Eighth International Conference on Quality of Multimedia Experience (QoMEX).

[31]  Henning Müller,et al.  Medical image retrieval using bag of meaningful visual words: unsupervised visual vocabulary pruning with PLSA , 2013, MIIRH '13.

[32]  Thomas Hofmann,et al.  Probabilistic Latent Semantic Analysis , 1999, UAI.

[33]  Cordelia Schmid,et al.  Beyond Bags of Features: Spatial Pyramid Matching for Recognizing Natural Scene Categories , 2006, 2006 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'06).

[34]  Nima Tajbakhsh,et al.  Convolutional Neural Networks for Medical Image Analysis: Full Training or Fine Tuning? , 2016, IEEE Transactions on Medical Imaging.

[35]  Joemon M. Jose,et al.  Topic Modeling for Content Based Image Retrieval , 2013 .

[36]  M. Grgic,et al.  Overview of the DICOM standard , 2008, 2008 50th International Symposium ELMAR.

[37]  Yudong Zhang,et al.  Identification of Alcoholism Based on Wavelet Renyi Entropy and Three-Segment Encoded Jaya Algorithm , 2018, Complex..

[38]  C. Krishna Mohan,et al.  Content based medical image retrieval using dictionary learning , 2015, Neurocomputing.

[39]  Giacomo Capizzi,et al.  Small lung nodules detection based on local variance analysis and probabilistic neural network , 2018, Comput. Methods Programs Biomed..

[40]  Sung Wook Baik,et al.  Efficient visual attention driven framework for key frames extraction from hysteroscopy videos , 2017, Biomed. Signal Process. Control..

[41]  Hayit Greenspan,et al.  X-ray Categorization and Retrieval on the Organ and Pathology Level, Using Patch-Based Visual Words , 2011, IEEE Transactions on Medical Imaging.

[42]  Marcin Wozniak,et al.  Bio-inspired methods modeled for respiratory disease detection from medical images , 2018, Swarm Evol. Comput..

[43]  Henning Müller,et al.  Multi-modal Relevance Feedback for Medical Image Retrieval , 2014, MedIR@SIGIR.

[44]  R. Feng,et al.  Optimization of L-shell X-ray fluorescence detection of lead in bone phantoms using synchrotron radiation , 2017 .

[45]  Hayit Greenspan,et al.  Medical Image Categorization and Retrieval for PACS Using the GMM-KL Framework , 2007, IEEE Transactions on Information Technology in Biomedicine.

[46]  Sung Wook Baik,et al.  Endoscopic Image Classification and Retrieval using Clustered Convolutional Features , 2017, Journal of Medical Systems.

[47]  Yujie Liu,et al.  A More Effective Method for Image Representation: Topic Model Based on Latent Dirichlet Allocation , 2015, 2015 14th International Conference on Computer-Aided Design and Computer Graphics (CAD/Graphics).

[48]  Jiangxu Li,et al.  Fabrication and properties of Eu:Lu2O3 transparent ceramics for X-ray radiation detectors , 2018, Optical Materials.

[49]  Guy Cazuguel,et al.  FEEDBACK ON A PUBLICLY DISTRIBUTED IMAGE DATABASE: THE MESSIDOR DATABASE , 2014 .

[50]  Antony J Hodgson,et al.  Strain-Initialized Robust Bone Surface Detection in 3-D Ultrasound. , 2017, Ultrasound in medicine & biology.