Light-driven Proton Pumps as a Potential Regulator for Carbon Fixation in Marine Diatoms
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H. Fukuzawa | H. Miyashita | A. Marchetti | Yuya Tsukamoto | K. Inomura | K. Ifuku | Susumu Yoshizawa | Keiichi Kojima | Y. Nishimura | Takashi Yamano | T. Azuma | Ryoma Kamikawa | Gabrielle Armin | Masumi Hasegawa | Yuki Sudo | Masuzu Kikuchi
[1] T. Kikukawa,et al. Functional expression of the eukaryotic proton pump rhodopsin OmR2 in Escherichia coli and its photochemical characterization , 2021, Scientific Reports.
[2] H. Fukuzawa,et al. Characterization of a CO2-Concentrating Mechanism with Low Sodium Dependency in the Centric Diatom Chaetoceros gracilis , 2021, Marine Biotechnology.
[3] M. Shirouzu,et al. A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage , 2020, Scientific Reports.
[4] A. Yamanaka,et al. Green-Sensitive, Long-Lived, Step-Functional Anion Channelrhodopsin-2 Variant as a High-Potential Neural Silencing Tool. , 2020, The journal of physical chemistry letters.
[5] S. Maberly,et al. Insights on the Functions and Ecophysiological Relevance of the Diverse Carbonic Anhydrases in Microalgae , 2020, International journal of molecular sciences.
[6] Hiroshi Ishikita,et al. Vectorial Proton Transport Mechanism of RxR, a Phylogenetically Distinct and Thermally Stable Microbial Rhodopsin , 2020, Scientific Reports.
[7] Samuel T. Wilson,et al. Mechanistic Model for the Coexistence of Nitrogen Fixation and Photosynthesis in Marine Trichodesmium , 2019, mSystems.
[8] A. Stamatakis,et al. Genesis and Gappa: processing, analyzing and visualizing phylogenetic (placement) data , 2019, bioRxiv.
[9] C. Bowler,et al. Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes , 2019, Proceedings of the National Academy of Sciences.
[10] M. Kuypers,et al. N2 fixation in free‐floating filaments of Trichodesmium is higher than in transiently suboxic colony microenvironments , 2018, The New phytologist.
[11] T. Kikukawa,et al. Spectroscopic characteristics of Rubricoccus marinus xenorhodopsin (RmXeR) and a putative model for its inward H+ transport mechanism. , 2018, Physical chemistry chemical physics : PCCP.
[12] C. Dupont,et al. Mechanisms of carbon dioxide acquisition and CO2 sensing in marine diatoms: a gateway to carbon metabolism , 2017, Philosophical Transactions of the Royal Society B: Biological Sciences.
[13] K. Niyogi,et al. The carbonic anhydrase CAH1 is an essential component of the carbon-concentrating mechanism in Nannochloropsis oceanica , 2017, Proceedings of the National Academy of Sciences.
[14] A. Marchetti,et al. Marine diatom proteorhodopsins and their potential role in coping with low iron availability , 2015, The ISME Journal.
[15] B. Hopkinson. A chloroplast pump model for the CO2 concentrating mechanism in the diatom Phaeodactylum tricornutum , 2014, Photosynthesis Research.
[16] Alexandros Stamatakis,et al. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies , 2014, Bioinform..
[17] Sarah R. Smith,et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing , 2014, PLoS biology.
[18] P. Hegemann,et al. Microbial and Animal Rhodopsins: Structures, Functions, and Molecular Mechanisms , 2013, Chemical reviews.
[19] K. Arrigo,et al. Processes and patterns of oceanic nutrient limitation , 2013 .
[20] M. Miyahara,et al. Highly Efficient Transformation of the Diatom Phaeodactylum tricornutum by Multi-Pulse Electroporation , 2013, Bioscience, biotechnology, and biochemistry.
[21] K. Katoh,et al. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability , 2013, Molecular biology and evolution.
[22] A. Tanaka,et al. SLC4 family transporters in a marine diatom directly pump bicarbonate from seawater , 2013, Proceedings of the National Academy of Sciences.
[23] U. Maier,et al. Distribution of the SELMA Translocon in Secondary Plastids of Red Algal Origin and Predicted Uncoupling of Ubiquitin-Dependent Translocation from Degradation , 2012, Eukaryotic Cell.
[24] K. Kogure,et al. Diversity and functional analysis of proteorhodopsin in marine Flavobacteria. , 2012, Environmental microbiology.
[25] David M Schruth,et al. Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability , 2012, Proceedings of the National Academy of Sciences.
[26] F. Morel,et al. INAUGURAL ARTICLE by a Recently Elected Academy Member:Efficiency of the CO2-concentrating mechanism of diatoms , 2011 .
[27] C. Slamovits,et al. Correction: Corrigendum: A bacterial proteorhodopsin proton pump in marine eukaryotes , 2011, Nature Communications.
[28] E. Virginia Armbrust,et al. pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree , 2010, BMC Bioinformatics.
[29] L. Brown,et al. The photocycle and proton translocation pathway in a cyanobacterial ion-pumping rhodopsin. , 2009, Biophysical journal.
[30] Jason T. Ritt,et al. Some thoughts on the concept of colimitation: Three definitions and the importance of bioavailability , 2008 .
[31] J. Antón,et al. Xanthorhodopsin: A Proton Pump with a Light-Harvesting Carotenoid Antenna , 2005, Science.
[32] P. Keeling,et al. Diversity and evolutionary history of plastids and their hosts. , 2004, American journal of botany.
[33] Oded Béjà,et al. Diversification and spectral tuning in marine proteorhodopsins , 2003, The EMBO journal.
[34] E. Bamberg,et al. Channelrhodopsin-1: A Light-Gated Proton Channel in Green Algae , 2002, Science.
[35] Oleg A. Sineshchekov,et al. Two rhodopsins mediate phototaxis to low- and high-intensity light in Chlamydomonas reinhardtii , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[36] E. Koonin,et al. Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. , 2000, Science.
[37] C. D. Keeling,et al. Ocean pCO2 calculated from dissolved inorganic carbon, alkalinity, and equations for K1 and K2: validation based on laboratory measurements of CO2 in gas and seawater at equilibrium , 2000 .
[38] J. Randerson,et al. Primary production of the biosphere: integrating terrestrial and oceanic components , 1998, Science.
[39] J. Raven. CO2-concentrating mechanisms: a direct role for thylakoid lumen acidification? , 1997 .
[40] D. M. Nelson,et al. Production and dissolution of biogenic silica in the ocean: Revised global estimates, comparison with regional data and relationship to biogenic sedimentation , 1995 .
[41] V. Smetacek,et al. Carbon dioxide limitation of marine phytoplankton growth rates , 1993, Nature.
[42] J. Beardall,et al. Utilization of inorganic carbon by marine microalgae , 1987 .
[43] D. Oesterhelt,et al. Rhodopsin-like protein from the purple membrane of Halobacterium halobium. , 1971, Nature: New biology.
[44] D. Wolf-Gladrow. Chemical Oceanography and the Marine Carbon Cycle , 2009 .
[45] J. Spudich,et al. Retinylidene proteins: structures and functions from archaea to humans. , 2000, Annual review of cell and developmental biology.