Improved routines to model the ocean carbonate system: mocsy 2.0

Abstract. Modelers compute ocean carbonate chemistry often based on code from the Ocean Carbon Cycle Model Intercomparison Project (OCMIP), last revised in 2005. Here we offer improved publicly available Fortran 95 routines to model the ocean carbonate system (mocsy 2.0). Both codes take as input dissolved inorganic carbon CT and total alkalinity AT, tracers that are conservative with respect to mixing and changes in temperature and salinity. Both use the same thermodynamic equilibria to compute surface-ocean pCO2 and simulate air–sea CO2 fluxes, but mocsy 2.0 uses a faster and safer algorithm (SolveSAPHE) to solve the alkalinity-pH equation, applicable even under extreme conditions. The OCMIP code computes only surface pCO2, while mocsy computes all other carbonate system variables throughout the water column. It also avoids three common model approximations: that density is constant, that modeled potential temperature is equal to in situ temperature, and that depth is equal to pressure. Errors from these approximations grow with depth, e.g., reaching 3% or more for pCO2, H+, and ΩA at 5000 m. The mocsy package uses the equilibrium constants recommended for best practices. It also offers two new options: (1) a recently reassessed total boron concentration BT that is 4% larger and (2) new K1 and K2 formulations designed to include low-salinity waters. Although these options enhance surface pCO2 by up to 7 μatm, individually, they should be avoided until (1) best-practice equations for K1 and K2 are reevaluated with the new BT and (2) formulations of K1 and K2 for low salinities are adjusted to be consistent among pH scales. The common modeling practice of neglecting alkalinity contributions from inorganic P and Si leads to substantial biases that could easily be avoided. With standard options for best practices, mocsy agrees with results from the CO2SYS package within 0.005% for the three inorganic carbon species (concentrations differ by less than 0.01 μmol kg−1). Yet by default, mocsy's deep-water fCO2 and pCO2 are many times larger than those from older packages, because they include pressure corrections for K0 and the fugacity coefficient.

[1]  James C. Orr,et al.  Improved routines to model the ocean carbonate system: mocsy 1.0 , 2014 .

[2]  J. Gattuso,et al.  Comparison of ten packages that compute ocean carbonate chemistry , 2014 .

[3]  J. Orr Interactive comment on "Improved routines to model the ocean carbonate system: mocsy 1.0" by J. C. Orr and J.-M Epitalon , 2014 .

[4]  Jean-Marc Molines,et al.  Eddy compensation and controls of the enhanced sea‐to‐air CO2 flux during positive phases of the Southern Annular Mode , 2013 .

[5]  G. Munhoven Mathematics of the total alkalinity-pH equation - pathway to robust and universal solution algorithms: the SolveSAPHE package v1.0.1 , 2013 .

[6]  Nicholas R. Bates,et al.  Summertime calcium carbonate undersaturation in shelf waters of the western Arctic Ocean – how biological processes exacerbate the impact of ocean acidification , 2012 .

[7]  F. Joos,et al.  Oxygen and indicators of stress for marine life in multi-model global warming projections , 2012 .

[8]  J. Orr Recent and Future Changes in Ocean Carbonate Chemistry , 2011 .

[9]  Ulf Riebesell,et al.  Guide to best practices for ocean acidification research and data reporting , 2011 .

[10]  F. Millero Carbonate constants for estuarine waters , 2010 .

[11]  R. Feely,et al.  The universal ratio of boron to chlorinity for the North Pacific and North Atlantic oceans , 2010 .

[12]  S. Levitus,et al.  World ocean atlas 2009 , 2010 .

[13]  Edward T. Peltzer,et al.  Limits to Marine Life , 2009, Science.

[14]  F. Joos,et al.  Modeled natural and excess radiocarbon: Sensitivities to the gas exchange formulation and ocean transport strength , 2008 .

[15]  Andrew G. Dickson,et al.  Guide to best practices for ocean CO2 measurements , 2007 .

[16]  Scott C. Doney,et al.  Natural Variability in a Stable, 1000-Yr Global Coupled Climate–Carbon Cycle Simulation , 2006 .

[17]  L. Bopp,et al.  Globalizing results from ocean in situ iron fertilization studies , 2006 .

[18]  F. Millero,et al.  Dissociation constants of carbonic acid in seawater as a function of salinity and temperature , 2006 .

[19]  Stephanie Dutkiewicz,et al.  On the solution of the carbonate chemistry system in ocean biogeochemistry models , 2006 .

[20]  E. Maier‐Reimer,et al.  Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms , 2005, Nature.

[21]  Richard A. Feely,et al.  A global ocean carbon climatology: Results from Global Data Analysis Project (GLODAP) , 2004 .

[22]  K. Caldeira,et al.  Oceanography: Anthropogenic carbon and ocean pH , 2003, Nature.

[23]  Stéphane Blain,et al.  An ecosystem model of the global ocean including Fe, Si, P colimitations , 2003 .

[24]  P. B. Duffy,et al.  Anthropogenic carbon and ocean pH , 2001 .

[25]  E. Maier‐Reimer,et al.  Sea‐air CO2 fluxes and carbon transport: A comparison of three ocean general circulation models , 2000 .

[26]  C. D. Keeling,et al.  Ocean pCO2 calculated from dissolved inorganic carbon, alkalinity, and equations for K1 and K2: validation based on laboratory measurements of CO2 in gas and seawater at equilibrium , 2000 .

[27]  F. Millero Thermodynamics of the carbon dioxide system in the oceans , 1995 .

[28]  Andrew G. Dickson,et al.  Handbook of methods for the analysis of the various parameters of the carbon dioxide system in sea water. Version 2 , 1994 .

[29]  M. Frankignoulle A complete set of buffer factors for acid/base CO2 system in seawater , 1994 .

[30]  E. Maier‐Reimer,et al.  Geochemical cycles in an Ocean General Circulation Model , 1993 .

[31]  A. Dickson Thermodynamics of the dissociation of boric acid in synthetic seawater from 273.15 to 318.15 K , 1990 .

[32]  F. F. Pérèz,et al.  Association constant of fluoride and hydrogen ions in seawater , 1987 .

[33]  A. Mucci The solubility of calcite and aragonite in seawater at various salinities , 1983 .

[34]  R. Weiss,et al.  Nitrous oxide solubility in water and seawater , 1980 .

[35]  Andrew G. Dickson,et al.  The estimation of acid dissociation constants in seawater media from potentionmetric titrations with strong base. I. The ionic product of water — Kw , 1979 .

[36]  S. Gorshkov,et al.  World ocean atlas , 1976 .

[37]  R. Weiss Carbon dioxide in water and seawater: the solubility of a non-ideal gas , 1974 .

[38]  L. Uppström The boron/chlorinity ratio of deep-sea water from the Pacific Ocean , 1974 .

[39]  C. Culberson,et al.  MEASUREMENT OF THE APPARENT DISSOCIATION CONSTANTS OF CARBONIC ACID IN SEAWATER AT ATMOSPHERIC PRESSURE1 , 1973 .

[40]  J. P. Riley,et al.  The major cation/chlorinity ratios in sea water , 1967 .

[41]  A. W. Morris,et al.  The bromide/chlorinity and sulphate/chlorinity ratio in sea water , 1966 .

[42]  J. P. Riley The occurrence of anomalously high fluoride concentrations in the North Atlantic , 1965 .