Real-time Algorithms for Sparse Neuronal System Identification

We consider the problem of sparse adaptive neuronal system identification, where the goal is to estimate the sparse time-varying neuronal model parameters in an online fashion from neural spiking observations. We develop two adaptive filters based on greedy estimation techniques and regularized log-likelihood maximization. We apply the proposed algorithms to simulated spiking data as well as experimentally recorded data from the ferret's primary auditory cortex during performance of auditory tasks. Our results reveal significant performance gains achieved by the proposed algorithms in terms of sparse identification and trackability, compared to existing algorithms.

[1]  Jianqing Fan,et al.  Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties , 2001 .

[2]  R. Tibshirani Regression Shrinkage and Selection via the Lasso , 1996 .

[3]  Emery N. Brown,et al.  Estimating a State-space Model from Point Process Observations Emery N. Brown , 2022 .

[4]  Michael A. Saunders,et al.  Atomic Decomposition by Basis Pursuit , 1998, SIAM J. Sci. Comput..

[5]  N. Meinshausen,et al.  High-dimensional graphs and variable selection with the Lasso , 2006, math/0608017.

[6]  J. Fritz,et al.  Active listening: Task-dependent plasticity of spectrotemporal receptive fields in primary auditory cortex , 2005, Hearing Research.

[7]  Vahid Tarokh,et al.  An Adaptive Greedy Algorithm With Application to Nonlinear Communications , 2010, IEEE Transactions on Signal Processing.

[8]  Shihab A. Shamma,et al.  Recursive Sparse Point Process Regression With Application to Spectrotemporal Receptive Field Plasticity Analysis , 2015, IEEE Transactions on Signal Processing.

[9]  Y. C. Pati,et al.  Orthogonal matching pursuit: recursive function approximation with applications to wavelet decomposition , 1993, Proceedings of 27th Asilomar Conference on Signals, Systems and Computers.

[10]  Vahid Tarokh,et al.  SPARLS: The Sparse RLS Algorithm , 2010, IEEE Transactions on Signal Processing.

[11]  Alexandru Onose,et al.  Greedy Sparse RLS , 2012, IEEE Transactions on Signal Processing.

[12]  Deanna Needell,et al.  CoSaMP: Iterative signal recovery from incomplete and inaccurate samples , 2008, ArXiv.

[13]  Olgica Milenkovic,et al.  Subspace Pursuit for Compressive Sensing Signal Reconstruction , 2008, IEEE Transactions on Information Theory.

[14]  Vahid Tarokh,et al.  Adaptive algorithms for sparse system identification , 2011, Signal Process..