Flux coupling analysis of genome-scale metabolic network reconstructions.
暂无分享,去创建一个
[1] R. Helling,et al. Nalidixic Acid-Resistant Mutants of Escherichia coli Deficient in Isocitrate Dehydrogenase , 1971, Journal of bacteriology.
[2] R. Helling,et al. Selection for citrate synthase deficiency in icd mutants of Escherichia coli , 1976, Journal of bacteriology.
[3] B. Palsson,et al. Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates , 1993, Applied and environmental microbiology.
[4] S. Schuster,et al. ON ELEMENTARY FLUX MODES IN BIOCHEMICAL REACTION SYSTEMS AT STEADY STATE , 1994 .
[5] B. Kholodenko,et al. Composite control of cell function: metabolic pathways behaving as single control units , 1995, FEBS letters.
[6] H. Westerhoff,et al. How to recognize monofunctional units in a metabolic system. , 1996, Journal of theoretical biology.
[7] R. Heinrich,et al. The Regulation of Cellular Systems , 1996, Springer US.
[8] J. Guest,et al. Construction and properties of aconitase mutants of Escherichia coli. , 1997, Microbiology.
[9] Juan Carlos Nuño,et al. METATOOL: for studying metabolic networks , 1999, Bioinform..
[10] J. Edwards,et al. Systems Properties of the Haemophilus influenzaeRd Metabolic Genotype* , 1999, The Journal of Biological Chemistry.
[11] Albert,et al. Emergence of scaling in random networks , 1999, Science.
[12] B. Palsson,et al. The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[13] D. Fell,et al. A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks , 2000, Nature Biotechnology.
[14] B. Palsson,et al. Assessment of the metabolic capabilities of Haemophilus influenzae Rd through a genome-scale pathway analysis. , 2000, Journal of theoretical biology.
[15] R. Albert,et al. The large-scale organization of metabolic networks , 2000, Nature.
[16] B. Palsson,et al. Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective. , 2000, Journal of theoretical biology.
[17] B O Palsson,et al. Metabolic modeling of microbial strains in silico. , 2001, Trends in biochemical sciences.
[18] A. Burgard,et al. Probing the performance limits of the Escherichia coli metabolic network subject to gene additions or deletions. , 2001, Biotechnology and bioengineering.
[19] B. Palsson,et al. In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data , 2001, Nature Biotechnology.
[20] D. Fell,et al. The small world inside large metabolic networks , 2000, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[21] Julio Collado-Vides,et al. RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12 , 2001, Nucleic Acids Res..
[22] A. Burgard,et al. Minimal Reaction Sets for Escherichia coli Metabolism under Different Growth Requirements and Uptake Environments , 2001, Biotechnology progress.
[23] J. Shendure,et al. Selection analyses of insertional mutants using subgenic-resolution arrays , 2001, Nature Biotechnology.
[24] Jason A. Papin,et al. Determination of redundancy and systems properties of the metabolic network of Helicobacter pylori using genome-scale extreme pathway analysis. , 2002, Genome research.
[25] B. Palsson,et al. Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth , 2002, Nature.
[26] Thomas Pfeiffer,et al. Exploring the pathway structure of metabolism: decomposition into subnetworks and application to Mycoplasma pneumoniae , 2002, Bioinform..
[27] G. Church,et al. Genome-Scale Metabolic Model of Helicobacter pylori 26695 , 2002, Journal of bacteriology.
[28] Jason A. Papin,et al. The genome-scale metabolic extreme pathway structure in Haemophilus influenzae shows significant network redundancy. , 2002, Journal of theoretical biology.
[29] S. Schuster,et al. Metabolic network structure determines key aspects of functionality and regulation , 2002, Nature.
[30] Friedrich Srienc,et al. Metabolic pathway analysis of a recombinant yeast for rational strain development. , 2002, Biotechnology and bioengineering.
[31] B. Palsson,et al. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR) , 2003, Genome Biology.
[32] A. Burgard,et al. Optknock: A bilevel programming framework for identifying gene knockout strategies for microbial strain optimization , 2003, Biotechnology and bioengineering.
[33] B. Palsson,et al. Constraints-based models: regulation of gene expression reduces the steady-state solution space. , 2003, Journal of theoretical biology.
[34] A. Burgard,et al. Exploring the overproduction of amino acids using the bilevel optimization framework OptKnock , 2003, Biotechnology and bioengineering.
[35] Steffen Klamt,et al. FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps , 2003, Bioinform..
[36] B. Palsson,et al. Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network. , 2003, Genome research.
[37] B. Palsson,et al. Thirteen Years of Building Constraint-Based In Silico Models of Escherichia coli , 2003, Journal of bacteriology.
[38] Jason A. Papin,et al. Genome-scale microbial in silico models: the constraints-based approach. , 2003, Trends in biotechnology.
[39] Bernhard O Palsson,et al. Development of network-based pathway definitions: the need to analyze real metabolic networks. , 2003, Trends in biotechnology.
[40] U. Sauer,et al. Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS. , 2003, European journal of biochemistry.
[41] Steffen Klamt,et al. Two approaches for metabolic pathway analysis? , 2003, Trends in biotechnology.
[42] J. Stelling,et al. Combinatorial Complexity of Pathway Analysis in Metabolic Networks , 2004, Molecular Biology Reports.
[43] Albert-László Barabási,et al. Evolution of Networks: From Biological Nets to the Internet and WWW , 2004 .