Integrated transcriptomic and metabolomic analyses reveal key metabolic pathways in response to potassium deficiency in coconut (Cocos nucifera L.) seedlings
暂无分享,去创建一个
Yanfang Yang | Yaodong Yang | Yingying Liu | Xin-An Yin | Siting Chen | Lilan Lu | Wei Yang | Yi Wu
[1] Liang Yin,et al. Integrated analyses of transcriptome and metabolome provides new insights into the primary and secondary metabolism in response to nitrogen deficiency and soil compaction stress in peanut roots , 2022, Frontiers in Plant Science.
[2] Wei Tang,et al. Transcriptional and Metabolic Responses of Maize Shoots to Long-Term Potassium Deficiency , 2021, Frontiers in Plant Science.
[3] Tingting Sun,et al. Transcriptome and metabolome analyses revealed the response mechanism of apple to different phosphorus stresses. , 2021, Plant physiology and biochemistry : PPB.
[4] Zhi-qiang Tao,et al. Impacts of Nitrogen Deficiency on Wheat (Triticum aestivum L.) Grain During the Medium Filling Stage: Transcriptomic and Metabolomic Comparisons , 2021, Frontiers in Plant Science.
[5] R. Liu,et al. Research Progress on Coconut Germplasm Resources, Cultivation and Utilization , 2021 .
[6] A. Eneji,et al. Transcriptome Analysis Unravels Key Factors Involved in Response to Potassium Deficiency and Feedback Regulation of K+ Uptake in Cotton Roots , 2021, International journal of molecular sciences.
[7] Baohong Zhang,et al. Metabolite Profile of Xylem Sap in Cotton Seedlings Is Changed by K Deficiency , 2020, Frontiers in Plant Science.
[8] I. Ullah,et al. Analysis of Metabolomic Changes in Lettuce Leaves under Low Nitrogen and Phosphorus Deficiencies Stresses , 2020, Agriculture.
[9] W. Scheible,et al. Transcriptional, metabolic, physiological and developmental responses of switchgrass to phosphorus limitation , 2020, Plant, cell & environment.
[10] Danping Liu,et al. Integration of the metabolome and transcriptome reveals the resistance mechanism to low nitrogen in wild soybean seedling roots , 2020 .
[11] Y. Jiang,et al. Effects of Potassium Levels on Plant Growth, Accumulation and Distribution of Carbon, and Nitrate Metabolism in Apple Dwarf Rootstock Seedlings , 2020, Frontiers in Plant Science.
[12] P. Lin,et al. Preliminary evidence of effects of potassium chloride on a metabolomic path to diabetes and cardiovascular disease , 2020, Metabolomics.
[13] A. Fernie,et al. Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. , 2020, Plant, cell & environment.
[14] H. Altay,et al. The Effects of Potassium Applications on Drought Stress in Sugar Beet , 2020, Sugar Tech.
[15] Chao Huang,et al. Multiple High-Affinity K+ Transporters and ABC Transporters Involved in K+ Uptake/Transport in the Potassium-Hyperaccumulator Plant Phytolacca acinosa Roxb , 2020, Plants.
[16] Peng Liu,et al. Transcriptome analysis of maize seedling roots in response to nitrogen-, phosphorus-, and potassium deficiency , 2020, Plant and Soil.
[17] Yafei Sun,et al. Transcriptome analysis in roots and leaves of wheat seedlings in response to low-phosphorus stress , 2019, Scientific Reports.
[18] Daniel E. Kaiser,et al. Potassium Fertilization Affects Alfalfa Forage Yield, Nutritive Value, Root Traits, and Persistence , 2019, Agronomy Journal.
[19] Cuiyue Liang,et al. Integration of metabolome and transcriptome analyses highlights soybean roots responding to phosphorus deficiency by modulating phosphorylated metabolite processes. , 2019, Plant physiology and biochemistry : PPB.
[20] Fengxue Gu,et al. Metabolic response and correlations between ions and metabolites in Phragmites communis under long-term salinity toxicity. , 2019, Plant physiology and biochemistry : PPB.
[21] Wei-Hua Wu,et al. ZmHAK5 and ZmHAK1 function in K+ uptake and distribution in maize under low K+ conditions. , 2019, Journal of integrative plant biology.
[22] Xiaoxi Zhen,et al. An Integrated Analysis of the Rice Transcriptome and Metabolome Reveals Differential Regulation of Carbon and Nitrogen Metabolism in Response to Nitrogen Availability , 2019, International journal of molecular sciences.
[23] J. Grima-Pettenati,et al. A systems biology view of wood formation in Eucalyptus grandis trees submitted to different potassium and water regimes. , 2019, The New phytologist.
[24] Bo Li,et al. The Cotton High-Affinity K+ Transporter, GhHAK5a, Is Essential for Shoot Regulation of K+ Uptake in Root under Potassium Deficiency. , 2019, Plant & cell physiology.
[25] W. Raun,et al. World Potassium Use Efficiency in Cereal Crops , 2019, Agronomy Journal.
[26] Shiwei Guo,et al. Impact of K deficiency on leaves and siliques photosynthesis via metabolomics in Brassica napus , 2019, Environmental and Experimental Botany.
[27] I. Cakmak,et al. Differential effects of varied potassium and magnesium nutrition on production and partitioning of photoassimilates in potato plants. , 2018, Physiologia plantarum.
[28] A. Ghasemzadeh,et al. Impact of organic and inorganic fertilizers on the yield and quality of silage corn intercropped with soybean , 2018, PeerJ.
[29] Guo-ping Zhang,et al. Root and leaf metabolite profiles analysis reveals the adaptive strategies to low potassium stress in barley , 2018, BMC Plant Biology.
[30] Yang Liu,et al. Comparative Transcriptome Profiling of Two Tomato Genotypes in Response to Potassium-Deficiency Stress , 2018, International journal of molecular sciences.
[31] R. Bock,et al. Transcriptome and metabolome analyses provide insights into root and root-released organic anion responses to phosphorus deficiency in oat , 2018, Journal of experimental botany.
[32] P. Xu,et al. The genome draft of coconut (Cocos nucifera) , 2017, GigaScience.
[33] D. T. Britto,et al. The nitrogen-potassium intersection: membranes, metabolism, and mechanism. , 2017, Plant, cell & environment.
[34] C. Abdelly,et al. Potassium deficiency alters growth, photosynthetic performance, secondary metabolites content, and related antioxidant capacity in Sulla carnosa grown under moderate salinity. , 2017, Plant physiology and biochemistry : PPB.
[35] M. Hajirezaei,et al. Induction of Barley Silicon Transporter HvLsi1 and HvLsi2, increased silicon concentration in the shoot and regulated Starch and ABA Homeostasis under Osmotic stress and Concomitant Potassium Deficiency , 2017, Front. Plant Sci..
[36] Q. Qian,et al. Transcriptome Analysis of Rice Seedling Roots in Response to Potassium Deficiency , 2017, Scientific Reports.
[37] Brijesh Singh Yadav,et al. Transcriptomic Analysis of Soil Grown T. aestivum cv. Root to Reveal the Changes in Expression of Genes in Response to Multiple Nutrients Deficiency , 2017, Front. Plant Sci..
[38] H. P. Maheswarappa,et al. Diagnosis and management of soil fertility constraints in coconut (Cocos nucifera) : A review , 2017, The Indian Journal of Agricultural Sciences.
[39] V. Reddy,et al. Potassium Starvation Limits Soybean Growth More than the Photosynthetic Processes across CO2 Levels , 2017, Front. Plant Sci..
[40] D. Oosterhuis,et al. Potassium deficiency affects the carbon-nitrogen balance in cotton leaves. , 2017, Plant physiology and biochemistry : PPB.
[41] T. Ren,et al. Effects of low sink demand on leaf photosynthesis under potassium deficiency. , 2017, Plant physiology and biochemistry : PPB.
[42] V. Gupta,et al. Abiotic Stress Responses and Microbe-Mediated Mitigation in Plants: The Omics Strategies , 2017, Front. Plant Sci..
[43] Amanullah,et al. Potassium Management for Improving Growth and Grain Yield of Maize (Zea mays L.) under Moisture Stress Condition , 2016, Scientific Reports.
[44] X. Ren,et al. Identification of low potassium stress-responsive proteins in tobacco (Nicotiana tabacum) seedling roots using an iTRAQ-based analysis. , 2016, Genetics and molecular research : GMR.
[45] Xinhua Zhao,et al. Response of root morphology, physiology and endogenous hormones in maize (Zea mays L,) to potassium deficiency , 2016 .
[46] P. Sgarbossa,et al. Synthesis, Crystal structure, DNA and protein binding studies of novel binuclear Pd(II) complex of 6-methoxy-1,2-dihydroquinoline-4(N,N)-dimethyldithiocemicarbazone , 2016 .
[47] M. Vašák,et al. Sodium and Potassium Ions in Proteins and Enzyme Catalysis. , 2016, Metal ions in life sciences.
[48] H. Krishnan,et al. Metabolomic profiling from leaves and roots of tomato (Solanum lycopersicum L.) plants grown under nitrogen, phosphorus or potassium-deficient condition. , 2015, Plant science : an international journal of experimental plant biology.
[49] Guohua Xu,et al. Improving rice tolerance to potassium deficiency by enhancing OsHAK16p:WOX11-controlled root development. , 2015, Plant biotechnology journal.
[50] Yu Sun,et al. Signaling pathway of MAPK/ERK in cell proliferation, differentiation, migration, senescence and apoptosis , 2015, Journal of receptor and signal transduction research.
[51] Bingzi Zhao,et al. Comparative analysis of potassium deficiency-responsive transcriptomes in low potassium susceptible and tolerant wheat (Triticum aestivum L.) , 2015, Scientific Reports.
[52] Zhenrui Huang,et al. Transcriptome Profiling of Sugarcane Roots in Response to Low Potassium Stress , 2015, PloS one.
[53] Steven L Salzberg,et al. HISAT: a fast spliced aligner with low memory requirements , 2015, Nature Methods.
[54] D. Huhman,et al. Identification of primary and secondary metabolites with phosphorus status-dependent abundance in Arabidopsis, and of the transcription factor PHR1 as a major regulator of metabolic changes during phosphorus limitation. , 2015, Plant, cell & environment.
[55] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[56] Y. Matsubayashi,et al. Perception of root-derived peptides by shoot LRR-RKs mediates systemic N-demand signaling , 2014, Science.
[57] E. Peiter,et al. Potassium in agriculture--status and perspectives. , 2014, Journal of plant physiology.
[58] Y. Rim,et al. Genome-wide and molecular evolution analyses of the KT/HAK/KUP family in tomato (Solanum lycopersicum L.) , 2014, Genes & Genomics.
[59] C. Abdelly,et al. Potassium deficiency in plants: effects and signaling cascades , 2014, Acta Physiologiae Plantarum.
[60] H. P. Maheswarappa,et al. Productivity and nutrient status of coconut (Cocos nucifera) as influenced by integrated nutrient management with vermicomposted coconut leaves , 2014 .
[61] Y. Nouvellon,et al. Photosynthetic and anatomical responses of Eucalyptus grandis leaves to potassium and sodium supply in a field experiment. , 2014, Plant, cell & environment.
[62] Wei-Hua Wu,et al. Potassium transport and signaling in higher plants. , 2013, Annual review of plant biology.
[63] Wei-Hua Wu,et al. Transcriptome analysis of rice root responses to potassium deficiency , 2012, BMC Plant Biology.
[64] Rong Zhou,et al. Transcript Profile of the Response of Two Soybean Genotypes to Potassium Deficiency , 2012, PloS one.
[65] A. Eneji,et al. Genotypic variations in photosynthetic and physiological adjustment to potassium deficiency in cotton (Gossypium hirsutum). , 2012, Journal of photochemistry and photobiology. B, Biology.
[66] S. Mohandas. Integrated nutrient management in east coast tall coconut. , 2012 .
[67] S. Mohandas. Effect of NPK fertilizer levels on mineral nutrition and yield of hybrid (tall × dwarf) coconut. , 2012 .
[68] J. Schjoerring,et al. Functions of macronutrients , 2012 .
[69] Colin N. Dewey,et al. RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome , 2011, BMC Bioinformatics.
[70] Robert D. Hall,et al. Plant Metabolomics in a nutshell: Potential and Future Challenges , 2011 .
[71] Ute Roessner,et al. ABIOTIC STRESS AND METABOLOMICS , 2011 .
[72] H. El-Shemy,et al. Potassium deficiency affects water status and photosynthetic rate of the vegetative sink in green house tomato prior to its effects on source activity. , 2011, Plant science : an international journal of experimental plant biology.
[73] T. Broschat. Fertilization Improves Cold Tolerance in Coconut Palm , 2010 .
[74] Volker Römheld,et al. Research on potassium in agriculture: needs and prospects , 2010, Plant and Soil.
[75] Mark D. Robinson,et al. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..
[76] Xingming Lian,et al. Gene expression profiles in rice roots under low phosphorus stress , 2010, Plant Molecular Biology.
[77] M. Stitt,et al. Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots1[W][OA] , 2009, Plant Physiology.
[78] E. Birney,et al. Pfam: the protein families database , 2013, Nucleic Acids Res..
[79] W. Pettigrew. Potassium influences on yield and quality production for maize, wheat, soybean and cotton. , 2008, Physiologia plantarum.
[80] Christine M. Palmer,et al. Type B Response Regulators of Arabidopsis Play Key Roles in Cytokinin Signaling and Plant Development[W] , 2008, The Plant Cell Online.
[81] Xiao-E. Yang,et al. Differential response of root morphology to potassium deficient stress among rice genotypes varying in potassium efficiency , 2008, Journal of Zhejiang University SCIENCE B.
[82] N. Nguyen,et al. Depression of sink activity precedes the inhibition of biomass production in tomato plants subjected to potassium deficiency stress. , 2007, Journal of experimental botany.
[83] Hank C Wu,et al. Phosphorus Stress in Common Bean: Root Transcript and Metabolic Responses1[W][OA] , 2007, Plant Physiology.
[84] T. Cuin,et al. Amino acids regulate salinity-induced potassium efflux in barley root epidermis , 2007, Planta.
[85] J. Yazaki,et al. Transcriptomic analysis indicates putative metabolic changes caused by manipulation of phosphorus availability in rice leaves. , 2006, Journal of experimental botany.
[86] M. Stitt,et al. PHO2, MicroRNA399, and PHR1 Define a Phosphate-Signaling Pathway in Plants1[W][OA] , 2006, Plant Physiology.
[87] M. Matsui,et al. shk1-D, a dwarf Arabidopsis mutant caused by activation of the CYP72C1 gene, has altered brassinosteroid levels. , 2005, The Plant journal : for cell and molecular biology.
[88] Oliver Fiehn,et al. A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[89] Susumu Goto,et al. The KEGG resource for deciphering the genome , 2004, Nucleic Acids Res..
[90] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[91] J. Yazaki,et al. Transcriptomic analysis of metabolic changes by phosphorus stress in rice plant roots , 2003 .
[92] Thomas D. Schmittgen,et al. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.
[93] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[94] Michael Y. Galperin,et al. The COG database: a tool for genome-scale analysis of protein functions and evolution , 2000, Nucleic Acids Res..
[95] W. Pettigrew. Potassium Deficiency Increases Specific Leaf Weights and Leaf Glucose Levels in Field-Grown Cotton , 1999 .
[96] D. Oosterhuis,et al. Physiological changes associated with potassium deficiency in cotton , 1999 .
[97] G. Schönknecht,et al. Cytoplasmic polyamines block the fast‐activating vacuolar cation channel , 1998 .
[98] H. Marschner,et al. Changes in phloem export of sucrose in leaves in response to phosphorus, potassium and magnesium deficiency in bean plants , 1994 .
[99] R. Leigh,et al. A HYPOTHESIS RELATING CRITICAL POTASSIUM CONCENTRATIONS FOR GROWTH TO THE DISTRIBUTION AND FUNCTIONS OF THIS ION IN THE PLANT CELL , 1984 .
[100] T. W. Perry,et al. Effect of potassium fertilization on chemical characteristics, yield and nutritive value of corn silage. , 1972, Journal of animal science.
[101] C. E. Hartt. Effect of potassium deficiency upon translocation of C in attached blades and entire plants of sugarcane. , 1969, Plant physiology.
[102] D. R. Hoagland,et al. The Water-Culture Method for Growing Plants Without Soil , 2018 .
[103] Thomas D. Schmittgen,et al. Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2 2 DD C T Method , 2022 .