Atopic dermatitis-associated protein interaction network lead to new insights in chronic sulfur mustard skin lesion mechanisms
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Mohieddin Jafari | Sadegh Azimzadeh Jamalkandi | M. Amiri | Mohieddin Jafari | Mojtaba Amiri | Sadegh Azimzadeh Jamalkandi | Seyed-Masoud Davoodi | S. Davoodi
[1] Damian Szklarczyk,et al. The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored , 2010, Nucleic Acids Res..
[2] K. Kehe,et al. Medical aspects of sulphur mustard poisoning. , 2005, Toxicology.
[3] Ali Masoudi-Nejad,et al. Proteomics Databases and Websites , 2012 .
[4] M. Greaves,et al. Itch: Role of Prostaglandins , 1973, British medical journal.
[5] E. Lam,et al. Studying the subcellular localization and DNA-binding activity of FoxO transcription factors, downstream effectors of PI3K/Akt. , 2009, Methods in molecular biology.
[6] Stefanie Dimmeler,et al. Akt-Dependent Phosphorylation of p21Cip1 Regulates PCNA Binding and Proliferation of Endothelial Cells , 2001, Molecular and Cellular Biology.
[7] Hans Jörnvall,et al. Proteome analysis of skin distinguishes acute guttate from chronic plaque psoriasis. , 2005, The Journal of investigative dermatology.
[8] David Martin,et al. Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network , 2003, Genome Biology.
[9] P. Elias,et al. Abnormal skin barrier in the etiopathogenesis of atopic dermatitis , 2009, Current allergy and asthma reports.
[10] M. Soroush,et al. Sulfur mustard-induced poikiloderma: A case report , 2011, Cutaneous and ocular toxicology.
[11] M. Mahmoudi,et al. Long‐term complications of sulphur mustard poisoning in severely intoxicated Iranian veterans , 2005, Fundamental & clinical pharmacology.
[12] Z. Pan. -Opposing actions of the ?-opioid receptor , 1998 .
[13] A. Bosio,et al. Enhanced expression levels of IL-31 correlate with IL-4 and IL-13 in atopic and allergic contact dermatitis. , 2006, The Journal of allergy and clinical immunology.
[14] A. Petersen,et al. Properties of group I allergens from grass pollen and their relation to cathepsin B, a member of the C1 family of cysteine proteinases. , 2002, European journal of biochemistry.
[15] G. Uhde. Mustard-gas burns of human eyes in World War II. , 1946, American journal of ophthalmology.
[16] A. Ny,et al. Epidermal overexpression of stratum corneum chymotryptic enzyme in mice: a model for chronic itchy dermatitis. , 2002, The Journal of investigative dermatology.
[17] A. Irvine,et al. Filaggrin mutations associated with skin and allergic diseases. , 2011, The New England journal of medicine.
[18] H. Lehrach,et al. A Human Protein-Protein Interaction Network: A Resource for Annotating the Proteome , 2005, Cell.
[19] K. Kehe,et al. Sulfur Mustard Research—Strategies for the Development of Improved Medical Therapy , 2008, Eplasty.
[20] H. Cordell,et al. Chromosome 11q13.5 variant associated with childhood eczema: An effect supplementary to filaggrin mutations , 2010, The Journal of allergy and clinical immunology.
[21] H. Nagase,et al. Involvement of central μ-opioid system in the scratching behavior in mice, and the suppression of it by the activation of κ-opioid system , 2003 .
[22] Zhongming Zhao,et al. Construction of a chloroplast protein interaction network and functional mining of photosynthetic proteins in Arabidopsis thaliana , 2008, Cell Research.
[23] K. Kehe,et al. The chronic effects of sulfur mustard exposure. , 2009, Toxicology.
[24] T. Sugita,et al. Identification of the major allergen of Malassezia globosa relevant for atopic dermatitis. , 2009, Journal of dermatological science.
[25] R. Ray,et al. Purification and characterization of protease activated by sulfur mustard in normal human epidermal keratinocytes. , 1998, Biochemical pharmacology.
[26] D. Hinshaw,et al. Sulfur mustard induces apoptosis and necrosis in endothelial cells. , 1996, Toxicology and applied pharmacology.
[27] H. Meier,et al. Effects of specific inhibitors of cellular functions on sulfur mustard-induced cell death , 1993, Cell Biology and Toxicology.
[28] Michael L. Creech,et al. Integration of biological networks and gene expression data using Cytoscape , 2007, Nature Protocols.
[29] M. Williams,et al. A human endogenous retrovirus K dUTPase triggers a TH1, TH17 cytokine response: does it have a role in psoriasis? , 2011, The Journal of investigative dermatology.
[30] Jingxia Li,et al. Essential roles of PI-3K/Akt/IKKbeta/NFkappaB pathway in cyclin D1 induction by arsenite in JB6 Cl41 cells. , 2006, Carcinogenesis.
[31] Jingxia Li,et al. Essential roles of PI-3K/Akt/IKKβ/NFκB pathway in cyclin D1 induction by arsenite in JB6 Cl41 cells , 2006 .
[32] J. Schalkwijk,et al. Transcriptomics and proteomics of human skin. , 2003, Briefings in functional genomics & proteomics.
[33] Lewis C. Cantley,et al. AKT/PKB Signaling: Navigating Downstream , 2007, Cell.
[34] Colin N A Palmer,et al. Common loss-of-function variants of the epidermal barrier protein filaggrin are a major predisposing factor for atopic dermatitis , 2006, Nature Genetics.
[35] M. Sung,et al. Comparative proteomic analysis of peripheral blood eosinophils from healthy donors and atopic dermatitis patients with eosinophilia , 2005, Proteomics.
[36] J. Petrali,et al. Ultrastructural correlates of the protection afforded by niacinamide against sulfur mustard-induced cytotoxicity of human lymphocytes in vitro. , 1990, Ultrastructural pathology.
[37] A. Grobbelaar,et al. The role of the TGF-β family in wound healing, burns and scarring: a review. , 2012, International journal of burns and trauma.
[38] S. Fay,et al. ORIGINAL ARTICLE: Immune Regulation at the Interface During Early Steps of Murine Implantation: Involvement of Two New Cytokines of the IL‐12 Family (IL‐23 and IL‐27) and of TWEAK , 2008, American journal of reproductive immunology.
[39] H. Young,et al. Increased blood levels of IgG reactive with secreted Streptococcus pyogenes proteins in chronic plaque psoriasis. , 2007, The Journal of investigative dermatology.
[40] Seon-Hwa Lee,et al. Non-invasive proteomic analysis of human skin keratins: screening of methionine oxidation in keratins by mass spectrometry. , 2011, Journal of proteomics.
[41] K. Kehe,et al. Clinical picture of sulfur mustard poisoning. , 2009, Toxicology.
[42] G. Pearson. Veterans at Risk: The Health Effects of Mustard Gas and Lewisite, edited by Constance M. Pechura and David P. Rall. , 1993, Nature.
[43] A. Ardalan,et al. Incidence of cancer in Iranian sulfur mustard exposed veterans: a long-term follow-up cohort study , 2012, Cancer Causes & Control.
[44] Z. Pan. mu-Opposing actions of the kappa-opioid receptor. , 1998, Trends in pharmacological sciences.
[45] P. Dubus,et al. Kallikrein 5 induces atopic dermatitis–like lesions through PAR2-mediated thymic stromal lymphopoietin expression in Netherton syndrome , 2009, The Journal of experimental medicine.
[46] Shi-Long Lu,et al. Role of TGFbeta in skin inflammation and carcinogenesis. , 2006, Molecular carcinogenesis.
[47] Do Hyung Kim,et al. Glycoproteomic analysis of plasma from patients with atopic dermatitis: CD5L and ApoE as potential biomarkers , 2008, Experimental & Molecular Medicine.
[48] Julie A. Dickerson,et al. PathwayAccess: CellDesigner plugins for pathway databases , 2010, Bioinform..
[49] Christian von Mering,et al. STRING 7—recent developments in the integration and prediction of protein interactions , 2006, Nucleic Acids Res..
[50] C. Gross,et al. 2,2'-Dichlorodiethyl sulfide (sulfur mustard) decreases NAD+ levels in human leukocytes. , 1987, Toxicology letters.
[51] K. Barnes,et al. Cytokine modulation of atopic dermatitis filaggrin skin expression. , 2007, The Journal of allergy and clinical immunology.
[52] J. Bhak,et al. Proteomic approaches to the analysis of atopic dermatitis and new insights from interactomics , 2008, Proteomics. Clinical applications.
[53] G. Maga,et al. Proliferating cell nuclear antigen (PCNA): a dancer with many partners , 2003, Journal of Cell Science.
[54] G. Cooper,et al. Vesicant burns. , 1991, British journal of plastic surgery.
[55] P. Mounts,et al. The cytokines NAP-1 (IL-8), MCP-1, IL-1 beta, and GRO in rabbit inflammatory skin lesions produced by the chemical irritant sulfur mustard , 1996, Inflammation.
[56] H. Williams,et al. Genetic association between an AACC insertion in the 3'UTR of the stratum corneum chymotryptic enzyme gene and atopic dermatitis. , 2004, The Journal of investigative dermatology.
[57] S. Peddada,et al. Early effects of iodine on DNA synthesis in sulfur mustard-induced skin lesions , 2006, Archives of Toxicology.
[58] E. Simpson,et al. Eczema prevalence in the United States: data from the 2003 National Survey of Children's Health. , 2011, The Journal of investigative dermatology.
[59] W. McLean,et al. Eczema genetics: current state of knowledge and future goals. , 2009, The Journal of investigative dermatology.
[60] M. Mahmoudi,et al. Delayed complications of sulfur mustard poisoning in the skin and the immune system of Iranian veterans 16–20 years after exposure , 2006, International journal of dermatology.
[61] M. Kuo,et al. Interleukin-6 Inhibits Transforming Growth Factor-β-induced Apoptosis through the Phosphatidylinositol 3-Kinase/Akt and Signal Transducers and Activators of Transcription 3 Pathways* , 1999, The Journal of Biological Chemistry.
[62] David P. Rall,et al. Veterans at Risk : the health effects of mustard gas and Lewisite , 1993 .
[63] Qiang Zhou,et al. Structures and biological functions of IL-31 and IL-31 receptors. , 2008, Cytokine & growth factor reviews.
[64] B. Bauer,et al. Caged fluorescent haptens reveal the generation of cryptic epitopes in allergic contact dermatitis. , 2011, The Journal of investigative dermatology.
[65] J. Schlager,et al. Cytokine, chemokine, and matrix metalloproteinase response after sulfur mustard injury to weanling pig skin , 2002, Journal of biochemical and molecular toxicology.
[66] Wh Sit,et al. Cancer Genomics & Proteomics , 2007 .
[67] Jingchun Chen,et al. Detecting functional modules in the yeast protein-protein interaction network , 2006, Bioinform..
[68] M. Soroush,et al. External urethral stenosis: a latent effect of sulfur mustard two decades post‐exposure , 2009, International Journal of Dermatology.
[69] M. Ghanei,et al. Bronchoalveolar lavage fluid proteomic patterns of sulfur mustard‐exposed patients , 2009, Proteomics. Clinical applications.
[70] M. Laiho,et al. The Phosphatidylinositol 3-Kinase/Akt Pathway Regulates Transforming Growth Factor-β Signaling by Destabilizing Ski and Inducing Smad7* , 2009, The Journal of Biological Chemistry.
[71] M. Ghanei,et al. Plasma proteomic profile of sulfur mustard exposed lung diseases patients using 2-dimensional gel electrophoresis , 2010, Clinical Proteomics.
[72] H. Cordell,et al. Meta-analysis of filaggrin polymorphisms in eczema and asthma: robust risk factors in atopic disease. , 2009, The Journal of allergy and clinical immunology.
[73] S. Yazdani,et al. Loss of expression of TGF-βs and their receptors in chronic skin lesions induced by sulfur mustard as compared with chronic contact dermatitis patients , 2011, BMC dermatology.
[74] Tobias Müller,et al. Identifying functional modules in protein–protein interaction networks: an integrated exact approach , 2008, ISMB.
[75] A. Kanwar,et al. EPIDEMIOLOGY AND CLINICAL FEATURES OF ATOPIC DERMATITIS IN INDIA , 2011, Indian journal of dermatology.
[76] K. Kent,et al. TGF-β and Smad3 modulate PI3K/Akt signaling pathway in vascular smooth muscle cells. , 2012, American journal of physiology. Heart and circulatory physiology.
[77] K. Ikeda,et al. [Effect of TRK-820, a selective kappa opioid receptor agonist, on scratching behavior in an animal model of atopic dermatitis]. , 2008, Nihon shinkei seishin yakurigaku zasshi = Japanese journal of psychopharmacology.
[78] D. Laskin,et al. Mechanisms mediating the vesicant actions of sulfur mustard after cutaneous exposure. , 2010, Toxicological sciences : an official journal of the Society of Toxicology.
[79] Kui Zhang,et al. Prediction of protein function using protein-protein interaction data , 2002, Proceedings. IEEE Computer Society Bioinformatics Conference.
[80] Mohieddin Jafari,et al. Comparison of in‐gel protein separation techniques commonly used for fractionation in mass spectrometry‐based proteomic profiling , 2012, Electrophoresis.
[81] H. Nagase,et al. Involvement of central mu-opioid system in the scratching behavior in mice, and the suppression of it by the activation of kappa-opioid system. , 2003, European journal of pharmacology.
[82] M. Ståhle,et al. HLA-C expression pattern is spatially different between psoriasis and eczema skin lesions. , 2007, The Journal of investigative dermatology.
[83] A. Nebreda,et al. AKT and oxidative stress team up to kill cancer cells. , 2008, Cancer cell.
[84] Gary R. Grotendorst,et al. Sulfur mustard induces immune sensitization in hairless guinea pigs. , 2010, International immunopharmacology.
[85] M. Ghanei,et al. Sulfur mustard toxicity: History, chemistry, pharmacokinetics, and pharmacodynamics , 2011, Critical reviews in toxicology.
[86] M. Hung,et al. Cytoplasmic localization of p21Cip1/WAF1 by Akt-induced phosphorylation in HER-2/neu-overexpressing cells , 2001, Nature Cell Biology.
[87] A. Fernandez-Flores. CD10 immunohistochemistry in prurigo nodularis , 2008, Histopathology.
[88] Jun-Mo Yang,et al. Two-dimensional electrophoresis analyses of atopic dermatitis and the chances to detect new candidate proteins by the variations in immobilized pH gradient strips. , 2007, Journal of dermatological science.
[89] K. Kehe,et al. Acute effects of sulfur mustard injury--Munich experiences. , 2009, Toxicology.
[90] Sean D Mooney,et al. Functional organization and its implication in evolution of the human protein-protein interaction network , 2012, BMC Genomics.
[91] Antonio del Sol,et al. Topology of small-world networks of protein?Cprotein complex structures , 2005, Bioinform..
[92] M. Balali-Mood,et al. Comparison of early and late toxic effects of sulfur mustard in Iranian veterans. , 2006, Basic & clinical pharmacology & toxicology.
[93] Chun-Ming Huang,et al. Comparative proteomic profiling of murine skin. , 2003, The Journal of investigative dermatology.
[94] T. Luger,et al. Proteinase-activated receptor-2 mediates itch: a novel pathway for pruritus in human skin. , 2008, The Journal of neuroscience : the official journal of the Society for Neuroscience.
[95] D. Siwak,et al. The HER2/Grb2/Akt pathway regulates the DNA binding activity of AP-1 in breast cancer cells. , 2004, Oncology reports.
[96] M. Naghizadeh,et al. Comparison of clinical efficacy of topical pimecrolimus with betamethasone in chronic skin lesions due to sulfur mustard exposure: a randomized, investigator-blind study. , 2009, Basic & clinical pharmacology & toxicology.
[97] Y. Paik,et al. Towards a proteomic analysis of atopic dermatitis: A two‐dimensional‐polyacrylamide gel electrophoresis/mass spectrometric analysis of cultured patient‐derived fibroblasts , 2004, Proteomics.
[98] L. O'Brien,et al. Negative Regulation of Inducible Nitric-oxide Synthase Expression Mediated through Transforming Growth Factor-β-dependent Modulation of Transcription Factor TCF11* , 2007, Journal of Biological Chemistry.
[99] Carolyn J. Broccardo,et al. Comparative proteomic profiling of patients with atopic dermatitis based on history of eczema herpeticum infection and Staphylococcus aureus colonization. , 2011, The Journal of allergy and clinical immunology.
[100] H. Mortazavi,et al. Late cutaneous manifestations 14 to 20 years after wartime exposure to sulfur mustard gas: a long-term investigation. , 2008, Archives of dermatology.
[101] Martin Kuiper,et al. BiNGO: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks , 2005, Bioinform..
[102] P. Holt,et al. Environment and development of atopy , 2005, Current opinion in allergy and clinical immunology.
[103] W. Farrar,et al. IL-6 enhances the nuclear translocation of DNA cytosine-5-methyltransferase 1 (DNMT1) via phosphorylation of the nuclear localization sequence by the AKT kinase. , 2007, Cancer genomics & proteomics.
[104] M. Naghizadeh,et al. Impact of pruritus on quality of life in sulfur mustard‐exposed Iranian veterans , 2008, International journal of dermatology.
[105] M. Balali-Mood,et al. The pharmacology, toxicology, and medical treatment of sulphur mustard poisoning , 2005, Fundamental & clinical pharmacology.
[106] M. Swami. Therapeutics: Akt: a double-edged sword , 2009, Nature Reviews Cancer.
[107] E. Theodorsson,et al. Immunohistochemical localization of interleukin-6-like immunoreactivity to peripheral nerve-like structures in normal and inflamed human skin , 1995, Archives of Dermatological Research.
[108] Shi-Long Lu,et al. Role of TGFβ in skin inflammation and carcinogenesis , 2006 .
[109] Mostafa Rezaei-Tavirani,et al. Exploring biological processes involved in embryonic stem cell differentiation by analyzing proteomic data. , 2013, Biochimica et biophysica acta.
[110] M. Smith,et al. TNF-α expression patterns as potential molecular biomarker for human skin cells exposed to vesicant chemical warfare agents: sulfur mustard (HD) and Lewisite (L) , 2004, Cell Biology and Toxicology.
[111] L. Liang,et al. Genome-Wide Scan on Total Serum IgE Levels Identifies FCER1A as Novel Susceptibility Locus , 2008, PLoS genetics.
[112] Y. Iyriboz. A recent exposure to mustard gas in the United States: clinical findings of a cohort (n = 247) 6 years after exposure. , 2004, MedGenMed : Medscape general medicine.
[113] T. Ruzicka,et al. Neurotrophin-4 production by human epidermal keratinocytes: increased expression in atopic dermatitis. , 2000, The Journal of investigative dermatology.
[114] Jingyu Hou,et al. Predicting protein functions from PPI networks using functional aggregation. , 2012, Mathematical biosciences.
[115] M. Ghanei,et al. Incidence of Lung, Eye, and Skin Lesions as Late Complications in 34,000 Iranians With Wartime Exposure to Mustard Agent , 2003, Journal of occupational and environmental medicine.
[116] M. Steinhoff,et al. IL-31: a new link between T cells and pruritus in atopic skin inflammation. , 2006, The Journal of allergy and clinical immunology.
[117] J. Chung,et al. Comparative proteomic analysis of peripheral blood mononuclear cells from atopic dermatitis patients and healthy donors. , 2008, BMB reports.
[118] M. Blumenthal. The role of genetics in the development of asthma and atopy , 2005, Current opinion in allergy and clinical immunology.
[119] Trey Ideker,et al. Cytoscape 2.8: new features for data integration and network visualization , 2010, Bioinform..
[120] S. DeRuiter,et al. Akt Regulates Basic Helix-Loop-Helix Transcription Factor-Coactivator Complex Formation and Activity during Neuronal Differentiation , 2003, Molecular and Cellular Biology.
[121] C. Dinarello,et al. Proinflammatory cytokines. , 2000, Chest.
[122] Mathieu Bastian,et al. Gephi: An Open Source Software for Exploring and Manipulating Networks , 2009, ICWSM.
[123] T. Takagi,et al. Assessment of prediction accuracy of protein function from protein–protein interaction data , 2001, Yeast.