Molecular basis of dihydrouridine formation on tRNA
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I. Tanaka | Tsutomu Suzuki | Yoshikazu Tanaka | M. Yao | K. Yamashita | N. Hirano | Takeo Suzuki | A. Nakamura | F. Yu
[1] I. Tanaka,et al. Crystallization and preliminary X-ray crystallographic analysis of dihydrouridine synthase from Thermus thermophilus and its complex with tRNA. , 2011, Acta crystallographica. Section F, Structural biology and crystallization communications.
[2] George M. Sheldrick,et al. Experimental phasing with SHELXC/D/E: combining chain tracing with density modification , 2010, Acta crystallographica. Section D, Biological crystallography.
[3] M. Rodnina,et al. The crystal structure of unmodified tRNAPhe from Escherichia coli , 2010, Nucleic acids research.
[4] Shigeyuki Yokoyama,et al. Tertiary structure checkpoint at anticodon loop modification in tRNA functional maturation , 2009, Nature Structural &Molecular Biology.
[5] B. Palfey,et al. Mechanism of Dihydrouridine Synthase 2 from Yeast and the Importance of Modifications for Efficient tRNA Reduction* , 2009, Journal of Biological Chemistry.
[6] A. Frump,et al. Interaction of human tRNA-dihydrouridine synthase-2 with interferon-induced protein kinase PKR , 2007, Nucleic acids research.
[7] G. Sheldrick. A short history of SHELX. , 2008, Acta crystallographica. Section A, Foundations of crystallography.
[8] Randy J. Read,et al. Phaser crystallographic software , 2007, Journal of applied crystallography.
[9] Tsutomu Suzuki,et al. Mass spectrometric identification and characterization of RNA-modifying enzymes. , 2007, Methods in enzymology.
[10] V. de Crécy-Lagard,et al. Molecular determinants of dihydrouridine synthase activity , 2006, FEBS letters.
[11] I. Tanaka,et al. Ammonia Channel Couples Glutaminase with Transamidase Reactions in GatCAB , 2006, Science.
[12] Yusuke Nakamura,et al. A novel human tRNA-dihydrouridine synthase involved in pulmonary carcinogenesis. , 2005, Cancer research.
[13] Sergey Steinberg,et al. Compilation of tRNA sequences and sequences of tRNA genes , 2004, Nucleic Acids Res..
[14] Kevin Cowtan,et al. research papers Acta Crystallographica Section D Biological , 2005 .
[15] K. Gajiwala,et al. The 1.59 Å resolution crystal structure of TM0096, a flavin mononucleotide binding protein from Thermotoga maritima , 2004, Proteins: Structure, Function, and Bioinformatics.
[16] T. Hughes,et al. The Specificities of Four Yeast Dihydrouridine Synthases for Cytoplasmic tRNAs*[boxs] , 2004, Journal of Biological Chemistry.
[17] O. Nureki,et al. Alternative Tertiary Structure of tRNA for Recognition by a Posttranscriptional Modification Enzyme , 2003, Cell.
[18] Ian W. Davis,et al. Structure validation by Cα geometry: ϕ,ψ and Cβ deviation , 2003, Proteins.
[19] V. de Crécy-Lagard,et al. Identification of the tRNA-Dihydrouridine Synthase Family* , 2002, The Journal of Biological Chemistry.
[20] K. Jensen,et al. Dihydrooxonate is a substrate of dihydroorotate dehydrogenase (DHOD) providing evidence for involvement of cysteine and serine residues in base catalysis. , 2001, Archives of biochemistry and biophysics.
[21] G. Schneider,et al. Crystal structure of dihydropyrimidine dehydrogenase, a major determinant of the pharmacokinetics of the anti‐cancer drug 5‐fluorouracil , 2001, The EMBO journal.
[22] P. Moore,et al. The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited. , 2000, RNA.
[23] J. Bachellerie,et al. The yeast Saccharomyces cerevisiae YDL112w ORF encodes the putative 2'-O-ribose methyltransferase catalyzing the formation of Gm18 in tRNAs. , 1999, RNA.
[24] R J Read,et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.
[25] Sine Larsen,et al. The crystal structure of lactococcus lactis dihydroorotate dehydrogenase A complexed with the enzyme reaction product throws light on its enzymatic function , 1998, Protein science : a publication of the Protein Society.
[26] A. Vagin,et al. MOLREP: an Automated Program for Molecular Replacement , 1997 .
[27] G. Murshudov,et al. Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.
[28] R. Y. Morita,et al. Posttranscriptional modification of tRNA in psychrophilic bacteria , 1997, Journal of bacteriology.
[29] J. McCloskey,et al. Conformational flexibility in RNA: the role of dihydrouridine. , 1996, Nucleic acids research.
[30] J. Horowitz,et al. Probing structural differences between native and in vitro transcribed Escherichia coli valine transfer RNA: evidence for stable base modification-dependent conformers. , 1993, Nucleic acids research.
[31] J. Ebel,et al. Conformation in solution of yeast tRNA(Asp) transcripts deprived of modified nucleotides. , 1990, Biochimie.
[32] Y. Kuchino,et al. Tumour-specific phenylalanine tRNA contains two supernumerary methylated bases , 1978, Nature.