Antibiotic-derived molecular probes for bacterial imaging

Infections caused by drug resistant bacteria poses a significant threat to global human health, with predicted annual mortality of 10 million by 2050. While much attention is focused on developing better therapies, improving diagnosis would allow for rapid initiation of optimal treatment, reducing unnecessary antibiotic use and enhancing therapeutic outcomes. There are currently no whole body imaging techniques in clinical use that are capable of specifically identifying bacterial infections. We have developed antibiotic-derived fluorescent probes that bind and illuminate either Gram-positive or Gram-negative bacteria with high specificity and selectivity over mammalian cells. Antibiotics are functionalised with an azide substituent in a position that minimises effects on antibiotic activity. These are reacted by facile 1,3-dipolar cycloaddition with alkyne-substituted imaging components such as visible or near-infrared fluorophores. The resulting adducts can be used as tools to image bacteria in vitro and in vivo. We have successfully functionalised representatives of seven major antibiotic classes. These derivatives retain antibacterial activity, and have been coupled with a range of fluorophores. Fluorescent versions of vancomycin and polymyxin B are particularly useful for specific labelling of G+ve and G-ve bacteria, respectively. Preliminary studies have now extended the visualisation component to include moieties compatible with PET imaging.

[1]  Zibo Li,et al.  Infection Imaging With (18)F-FDS and First-in-Human Evaluation. , 2016, Nuclear medicine and biology.

[2]  J. Pagés,et al.  New Peptide-based antimicrobials for tackling drug resistance in bacteria: single-cell fluorescence imaging. , 2013, ACS medicinal chemistry letters.

[3]  D. Weiss,et al.  PET imaging of bacterial infections with fluorine-18-labeled maltohexaose. , 2014, Angewandte Chemie.

[4]  G. Ferro-Flores,et al.  Imaging of bacteria with radiolabeled ubiquicidin by SPECT and PET techniques , 2016, Clinical and Translational Imaging.

[5]  W. Wadsak,et al.  In vitro and in vivo evaluation of [18F]ciprofloxacin for the imaging of bacterial infections with PET , 2005, European Journal of Nuclear Medicine and Molecular Imaging.

[6]  K. Wood,et al.  Duration of hypotension before initiation of effective antimicrobial therapy is the critical determinant of survival in human septic shock* , 2006, Critical care medicine.

[7]  Ming Hu,et al.  Uptake of Polymyxin B into Renal Cells , 2014, Antimicrobial Agents and Chemotherapy.

[8]  F. Beekman,et al.  Development of a Hybrid Tracer for SPECT and Optical Imaging of Bacterial Infections. , 2015, Bioconjugate chemistry.

[9]  M. K. Harper,et al.  A Central Strategy for Converting Natural Products into Fluorescent Probes , 2006, Chembiochem : a European journal of chemical biology.

[10]  W. R. Taylor,et al.  Novel PET and Near Infrared Imaging Probes for the Specific Detection of Bacterial Infections Associated With Cardiac Devices. , 2019, JACC. Cardiovascular imaging.

[11]  S. Gambhir,et al.  Investigation of 6-[18F]-Fluoromaltose as a Novel PET Tracer for Imaging Bacterial Infection , 2014, PloS one.

[12]  H. Sinzinger,et al.  Radionuclide imaging: Past, present and future outlook in the diagnosis of infected prosthetic joints. , 2015, Hellenic journal of nuclear medicine.

[13]  Bing Xu,et al.  Dual Fluorescent- and Isotopic-Labelled Self-Assembling Vancomycin for in vivo Imaging of Bacterial Infections. , 2017, Angewandte Chemie.

[14]  Brad Spellberg,et al.  Combating antimicrobial resistance: policy recommendations to save lives. , 2011, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[15]  Gooitzen M van Dam,et al.  Targeted imaging of bacterial infections: advances, hurdles and hopes. , 2015, FEMS microbiology reviews.

[16]  Xinghai Ning,et al.  Clinical Diagnosis of Bacterial Infection via FDG-PET Imaging , 2013 .

[17]  M. Schäfers,et al.  Harnessing the Maltodextrin Transport Mechanism for Targeted Bacterial Imaging: Structural Requirements for Improved in vivo Stability in Tracer Design , 2018, ChemMedChem.

[18]  J. Ballinger,et al.  Radiolabelled leukocytes for imaging inflammation: how radiochemistry affects clinical use. , 2005, The quarterly journal of nuclear medicine and molecular imaging : official publication of the Italian Association of Nuclear Medicine (AIMN) [and] the International Association of Radiopharmacology (IAR), [and] Section of the Society of....

[19]  S. Gambhir,et al.  Synthesis of [18F]-labelled Maltose Derivatives as PET Tracers for Imaging Bacterial Infection , 2015, Molecular Imaging and Biology.

[20]  E. Fischer,et al.  ImmunoPET/MR imaging allows specific detection of Aspergillus fumigatus lung infection in vivo , 2016, Proceedings of the National Academy of Sciences.

[21]  H. Sahl,et al.  Daptomycin inhibits cell envelope synthesis by interfering with fluid membrane microdomains , 2016, Proceedings of the National Academy of Sciences.

[22]  Johnny X. Huang,et al.  An azido-oxazolidinone antibiotic for live bacterial cell imaging and generation of antibiotic variants , 2014, Bioorganic & medicinal chemistry.

[23]  K. Carroll,et al.  Laboratory detection of sepsis: biomarkers and molecular approaches. , 2013, Clinics in laboratory medicine.

[24]  V. Saini,et al.  A Systematic Approach for Developing Bacteria-Specific Imaging Tracers , 2017, The Journal of Nuclear Medicine.

[25]  M. Cooper,et al.  Fluorescent Trimethoprim Conjugate Probes To Assess Drug Accumulation in Wild Type and Mutant Escherichia coli , 2016, ACS infectious diseases.

[26]  D. Rudner,et al.  Imaging peptidoglycan biosynthesis in Bacillus subtilis with fluorescent antibiotics. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[27]  Thomas Böttcher,et al.  Natural products and their biological targets: proteomic and metabolomic labeling strategies. , 2010, Angewandte Chemie.

[28]  R. Yuste,et al.  A Trimethoprim-Based Chemical Tag for Live Cell Two-Photon Imaging , 2010, Chembiochem : a European journal of chemical biology.

[29]  Heather Eggleston,et al.  Molecular imaging of bacterial infections in vivo: the discrimination of infection from inflammation , 2014, Informatics.

[30]  M. Cooper,et al.  Fluorescent Antibiotics: New Research Tools to Fight Antibiotic Resistance. , 2018, Trends in biotechnology.

[31]  S. Malik,et al.  Synthesis and biodistribution of 99mTc-Vancomycin in a model of bacterial infection , 2005 .

[32]  Eric D Brown,et al.  Antibiotics as probes of biological complexity. , 2011, Nature chemical biology.

[33]  Djillali Annane,et al.  Septic shock , 2005, The Lancet.

[34]  Christopher H Contag,et al.  Specific Imaging of Bacterial Infection Using 6″-18F-Fluoromaltotriose: A Second-Generation PET Tracer Targeting the Maltodextrin Transporter in Bacteria , 2017, The Journal of Nuclear Medicine.

[35]  P. Fernandes,et al.  Synthesis and antibacterial activity of novel 4-aryl-[1,2,3]-triazole containing macrolides. , 2011, Bioorganic & medicinal chemistry letters.

[36]  Stefano Pagliara,et al.  Investigating the physiology of viable but non-culturable bacteria by microfluidics and time-lapse microscopy , 2017, BMC Biology.

[37]  Hao Ge,et al.  Enhanced Efflux Activity Facilitates Drug Tolerance in Dormant Bacterial Cells , 2016, Molecular cell.

[38]  M. Pomper,et al.  Imaging Enterobacteriaceae infection in vivo with 18F-fluorodeoxysorbitol positron emission tomography , 2014, Science Translational Medicine.

[39]  M. Sathekge,et al.  Development and prospects of dedicated tracers for the molecular imaging of bacterial infections. , 2013, Bioconjugate chemistry.

[40]  H. Mertens,et al.  Structure, Function, and Biosynthetic Origin of Octapeptin Antibiotics Active against Extensively Drug-Resistant Gram-Negative Bacteria. , 2018, Cell chemical biology.

[41]  P. Majcherczyk,et al.  Penicillin-Binding Protein Gene Alterations in Streptococcus uberis Isolates Presenting Decreased Susceptibility to Penicillin , 2010, Antimicrobial Agents and Chemotherapy.

[42]  R. Liskamp,et al.  Synthesis, antimicrobial activity, and membrane permeabilizing properties of C-terminally modified nisin conjugates accessed by CuAAC. , 2013, Bioconjugate chemistry.

[43]  S. Sieber,et al.  Unraveling the protein targets of vancomycin in living S. aureus and E. faecalis cells. , 2011, Journal of the American Chemical Society.

[44]  K. Gebhardt,et al.  The diagnosis of urinary tract infection: a systematic review. , 2010, Deutsches Arzteblatt international.

[45]  E. Roche,et al.  Design, synthesis, and biological evaluation of BODIPY-erythromycin probes for bacterial ribosomes. , 2006, Bioorganic & medicinal chemistry letters.

[46]  Dariusz Matosiuk,et al.  Click chemistry for drug development and diverse chemical-biology applications. , 2013, Chemical reviews.

[47]  G. Zhanel,et al.  Evaluation of amphiphilic aminoglycoside-peptide triazole conjugates as antibacterial agents. , 2010, Bioorganic & medicinal chemistry letters.

[48]  S. Rafnsson,et al.  Assessing available information on the burden of sepsis: global estimates of incidence, prevalence and mortality , 2012, Journal of global health.

[49]  A. August,et al.  Endocytic delivery of vancomycin mediated by a synthetic cell surface receptor: rescue of bacterially infected Mammalian cells and tissue targeting in vivo. , 2007, Journal of the American Chemical Society.

[50]  Saptarsi M. Haldar,et al.  Infective endocarditis: diagnosis and management , 2006, Nature Clinical Practice Cardiovascular Medicine.

[51]  M. Światek,et al.  Unusual binding ability of vancomycin towards Cu2+ ions. , 2005, Dalton transactions.

[52]  Stephen V Frye,et al.  The art of the chemical probe. , 2010, Nature chemical biology.

[53]  W. Oyen,et al.  Cost-Effectiveness of Routine 18F-FDG PET/CT in High-Risk Patients with Gram-Positive Bacteremia , 2011, The Journal of Nuclear Medicine.

[54]  G. Samuel,et al.  68Ga‐labeled Ciprofloxacin Conjugates as Radiotracers for Targeting Bacterial Infection , 2016, Chemical biology & drug design.