The significance of naturally occurring neuraminidase quasispecies of H5N1 avian influenza virus on resistance to oseltamivir: a point of concern.
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T. Rungrotmongkol | P. Puthavathana | Hatairat Lerdsamran | N. Schaduangrat | S. Ubol | Jiraphorn Phanich | H. Lerdsamran
[1] Daniel J. Sindhikara,et al. A 3D‐RISM/RISM study of the oseltamivir binding efficiency with the wild‐type and resistance‐associated mutant forms of the viral influenza B neuraminidase , 2016, Protein science : a publication of the Protein Society.
[2] J. Correa-Basurto,et al. Molecular modeling studies demonstrate key mutations that could affect the ligand recognition by influenza AH1N1 neuraminidase , 2015, Journal of Molecular Modeling.
[3] M. Soliman,et al. Understanding the cross-resistance of oseltamivir to H1N1 and H5N1 influenza A neuraminidase mutations using multidimensional computational analyses , 2015, Drug design, development and therapy.
[4] J. Järhult,et al. Influenza A(H7N9) Virus Acquires Resistance-Related Neuraminidase I222T Substitution When Infected Mallards Are Exposed to Low Levels of Oseltamivir in Water , 2015, Antimicrobial Agents and Chemotherapy.
[5] J. Nguyen-Van-Tam,et al. Neuraminidase inhibitors: who, when, where? , 2015, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[6] J. McKimm-Breschkin,et al. Neuraminidase mutations conferring resistance to laninamivir lead to faster drug binding and dissociation. , 2015, Antiviral research.
[7] Julian E. Fuchs,et al. Interface dynamics explain assembly dependency of influenza neuraminidase catalytic activity , 2013, Journal of biomolecular structure & dynamics.
[8] Kuk Jin Park,et al. Profiling and Characterization of Influenza Virus N1 Strains Potentially Resistant to Multiple Neuraminidase Inhibitors , 2014, Journal of Virology.
[9] A. Nitsch-Osuch,et al. Influenza viruses resistant to neuraminidase inhibitors. , 2014, Acta biochimica Polonica.
[10] K. Ramanathan,et al. Insight into the Oseltamivir Resistance R292K Mutation in H5N1 Influenza Virus: A Molecular Docking and Molecular Dynamics Approach , 2013, Cell Biochemistry and Biophysics.
[11] Hiroshi Ohrui,et al. Functional and Structural Analysis of Influenza Virus Neuraminidase N3 Offers Further Insight into the Mechanisms of Oseltamivir Resistance , 2013, Journal of Virology.
[12] Yuguang Mu,et al. Plasticity of 150-Loop in Influenza Neuraminidase Explored by Hamiltonian Replica Exchange Molecular Dynamics Simulations , 2013, PloS one.
[13] J. McKimm-Breschkin,et al. Influenza neuraminidase inhibitors: antiviral action and mechanisms of resistance , 2013, Influenza and other respiratory viruses.
[14] J. Correa-Basurto,et al. Outside-binding site mutations modify the active site's shapes in neuraminidase from influenza A H1N1. , 2013, Biopolymers.
[15] P. Walker,et al. Outbreaks of H5N1 in poultry in Thailand: the relative role of poultry production types in sustaining transmission and the impact of active surveillance in control , 2012, Journal of The Royal Society Interface.
[16] Parimal Kar,et al. Mutation-induced loop opening and energetics for binding of tamiflu to influenza N8 neuraminidase. , 2012, The journal of physical chemistry. B.
[17] J. Nicholls,et al. Highly Pathogenic Influenza A(H5N1) Virus Survival in Complex Artificial Aquatic Biotopes , 2012, PloS one.
[18] R. Webster,et al. Fitness of neuraminidase inhibitor-resistant influenza A viruses. , 2011, Current opinion in virology.
[19] J. Lynch,et al. Influenza: epidemiology, clinical features, therapy, and prevention. , 2011, Seminars in respiratory and critical care medicine.
[20] Robert V. Swift,et al. Mechanism of 150-cavity formation in influenza neuraminidase , 2011, Nature communications.
[21] G. Gao,et al. Influenza A Virus N5 Neuraminidase Has an Extended 150-Cavity , 2011, Journal of Virology.
[22] M. Fukuda,et al. Intra-host diversities of the receptor-binding domain of stork faeces-derived avian H5N1 viruses and its significance as predicted by molecular dynamic simulation , 2011, The Journal of general virology.
[23] Jan H. Jensen,et al. PROPKA3: Consistent Treatment of Internal and Surface Residues in Empirical pKa Predictions. , 2011, Journal of chemical theory and computation.
[24] John Z H Zhang,et al. Selective binding of antiinfluenza drugs and their analogues to 'open' and 'closed' conformations of H5N1 neuraminidase. , 2010, The journal of physical chemistry. B.
[25] Klaus Schulten,et al. Molecular Dynamics Simulations Suggest that Electrostatic Funnel Directs Binding of Tamiflu to Influenza N1 Neuraminidases , 2010, PLoS Comput. Biol..
[26] R. Webster,et al. Antiviral Susceptibility of Avian and Swine Influenza Virus of the N1 Neuraminidase Subtype , 2010, Journal of Virology.
[27] David Baltimore,et al. Permissive Secondary Mutations Enable the Evolution of Influenza Oseltamivir Resistance , 2010, Science.
[28] P. Daszak,et al. Ecology of avian influenza viruses in a changing world , 2010, Annals of the New York Academy of Sciences.
[29] R. Webster,et al. Effect of Neuraminidase Inhibitor–Resistant Mutations on Pathogenicity of Clade 2.2 A/Turkey/15/06 (H5N1) Influenza Virus in Ferrets , 2010, PLoS pathogens.
[30] Hiroaki Tanaka,et al. Oseltamivir Carboxylate, the Active Metabolite of Oseltamivir Phosphate (Tamiflu), Detected in Sewage Discharge and River Water in Japan , 2009, Environmental health perspectives.
[31] Gabriele Neumann,et al. H5N1 influenza viruses: outbreaks and biological properties , 2010, Cell Research.
[32] Thanyada Rungrotmongkol,et al. How does each substituent functional group of oseltamivir lose its activity against virulent H5N1 influenza mutants? , 2009, Biophysical chemistry.
[33] Thanyada Rungrotmongkol,et al. Dynamic Behavior of Avian Influenza A Virus Neuraminidase Subtype H5N1 in Complex with Oseltamivir, Zanamivir, Peramivir, and Their Phosphonate Analogues , 2009, J. Chem. Inf. Model..
[34] Thanyada Rungrotmongkol,et al. Susceptibility of antiviral drugs against 2009 influenza A (H1N1) virus. , 2009, Biochemical and biophysical research communications.
[35] A. Kelso,et al. Zanamivir-Resistant Influenza Viruses with a Novel Neuraminidase Mutation , 2009, Journal of Virology.
[36] J. Fick,et al. Detection of the Antiviral Drug Oseltamivir in Aquatic Environments , 2009, PloS one.
[37] J. Andrew McCammon,et al. Characterizing Loop Dynamics and Ligand Recognition in Human- and Avian-Type Influenza Neuraminidases via Generalized Born Molecular Dynamics and End-Point Free Energy Calculations , 2009, Journal of the American Chemical Society.
[38] H. Hsieh,et al. Aurintricarboxylic acid inhibits influenza virus neuraminidase , 2008, Antiviral Research.
[39] Thanyada Rungrotmongkol,et al. Understanding of known drug‐target interactions in the catalytic pocket of neuraminidase subtype N1 , 2008, Proteins.
[40] B. Lina,et al. Mutations of neuraminidase implicated in neuraminidase inhibitors resistance. , 2008, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.
[41] B. Lina,et al. Impact of influenza A virus neuraminidase mutations on the stability, activity, and sensibility of the neuraminidase to neuraminidase inhibitors. , 2008, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.
[42] I. Barr,et al. Neuraminidase inhibitor drug susceptibility differs between influenza N1 and N2 neuraminidase following mutagenesis of two conserved residues. , 2007, Antiviral research.
[43] Mark von Itzstein,et al. The war against influenza: discovery and development of sialidase inhibitors , 2007, Nature Reviews Drug Discovery.
[44] Mats Tysklind,et al. Antiviral Oseltamivir Is not Removed or Degraded in Normal Sewage Water Treatment: Implications for Development of Resistance by Influenza A Virus , 2007, PloS one.
[45] R. Webster,et al. Neuraminidase Inhibitor-Resistant Recombinant A/Vietnam/1203/04 (H5N1) Influenza Viruses Retain Their Replication Efficiency and Pathogenicity In Vitro and In Vivo , 2007, Journal of Virology.
[46] M. Nei,et al. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. , 2007, Molecular biology and evolution.
[47] Jung-Hsin Lin,et al. Remarkable loop flexibility in avian influenza N1 and its implications for antiviral drug design. , 2007, Journal of the American Chemical Society.
[48] I. Barr,et al. Susceptibility of highly pathogenic A(H5N1) avian influenza viruses to the neuraminidase inhibitors and adamantanes. , 2007, Antiviral research.
[49] Mark von Itzstein,et al. The war against influenza: discovery and development of sialidase inhibitors. , 2007, Nature reviews. Drug discovery.
[50] David J. Stevens,et al. The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design , 2006, Nature.
[51] R. Webster,et al. Importance of Neuraminidase Active-Site Residues to the Neuraminidase Inhibitor Resistance of Influenza Viruses , 2006, Journal of Virology.
[52] F. Agou,et al. Natural Variation Can Significantly Alter the Sensitivity of Influenza A (H5N1) Viruses to Oseltamivir , 2006, Antimicrobial Agents and Chemotherapy.
[53] R. Webster,et al. Domestic Ducks and H5N1 Influenza Epidemic, Thailand , 2006, Emerging infectious diseases.
[54] F. Hayden,et al. Antiviral resistance in influenza viruses--implications for management and pandemic response. , 2006, The New England journal of medicine.
[55] D. Lewis,et al. Avian flu to human influenza. , 2006, Annual review of medicine.
[56] E. De Clercq,et al. Antiviral agents active against influenza A viruses , 2006, Nature reviews. Drug discovery.
[57] Holger Gohlke,et al. The Amber biomolecular simulation programs , 2005, J. Comput. Chem..
[58] R. Webster,et al. Neuraminidase Inhibitor-Resistant Influenza Viruses May Differ Substantially in Fitness and Transmissibility , 2005, Antimicrobial Agents and Chemotherapy.
[59] Yoshihiro Kawaoka,et al. Influenza: lessons from past pandemics, warnings from current incidents , 2005, Nature Reviews Microbiology.
[60] P. Palese,et al. Influenza: old and new threats , 2004, Nature Medicine.
[61] Conrad C. Huang,et al. UCSF Chimera—A visualization system for exploratory research and analysis , 2004, J. Comput. Chem..
[62] R. Webster,et al. A DNA transfection system for generation of influenza A virus from eight plasmids. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[63] N. Cox,et al. Genetic characterization of the pathogenic influenza A/Goose/Guangdong/1/96 (H5N1) virus: similarity of its hemagglutinin gene to those of H5N1 viruses from the 1997 outbreaks in Hong Kong. , 1999, Virology.
[64] T. A. Hall,et al. BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .
[65] P. Colman. Influenza virus neuraminidase: Structure, antibodies, and inhibitors , 1994, Protein science : a publication of the Protein Society.
[66] T. Darden,et al. The effect of long‐range electrostatic interactions in simulations of macromolecular crystals: A comparison of the Ewald and truncated list methods , 1993 .
[67] R. Krug,et al. The Influenza Viruses , 2011, The Viruses.
[68] W. L. Jorgensen,et al. Computer Simulations of Organic Reactions in Solution a , 1986, Annals of the New York Academy of Sciences.
[69] H. Berendsen,et al. Molecular dynamics with coupling to an external bath , 1984 .
[70] W. Kabsch,et al. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features , 1983, Biopolymers.
[71] G. Ciccotti,et al. Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes , 1977 .