Ultrasensitive chemiluminescence biosensors using nucleic acid-functionalized silver-cysteine nanowires as signal amplifying labels.

Ultrasensitive chemiluminescence (CL) sensors for biomolecules (DNA and proteins) have been developed by adopting DNA-functionalized silver-cysteine hybrid nanowires (p-SCNWs) as signal amplifying labels. The sensing is established from a sandwich-type DNA hybridization, where the target DNA strands are initially hybridized with the capture DNA located at paramagnetic microspheres (PMs) and subsequently hybridized with p-SCNWs functionalized with the signal DNA probe. After magnetic separation, p-SCNWs on the hybrids were completely decomposed with HNO3 to release numerous silver ions. The powerful catalysis of silver ions toward the redox reaction of K2S2O8-Mn2+-H3PO4 causes the generation of KMnO4 that is capable of oxidizing luminol at high pH, triggering an amplified chemiluminescent signal emission. The sensing combines the extraordinary sensitivity of the catalytic chemiluminescence technology and the amplifying strategy via releasing large quantities of silver ions as the catalyst from each hybrid, enabling the assay of target DNA strands at a concentration as low as 0.34 fM. The CL signals associated with single-base pair mismatched DNA strands and non-complementary DNA strands are able to be discriminated well from the CL signal related to the complementary DNA hybridization. Likewise, the combination of p-SCNWs functionalized with an aptamer and PMs/aptamer/thrombin complex allowed the chemiluminescence sensing of thrombin with a low limit of detection corresponding to 0.17 pM.

[1]  Youyu Zhang,et al.  Hairpin DNA switch for ultrasensitive spectrophotometric detection of DNA hybridization based on gold nanoparticles and enzyme signal amplification. , 2010, Analytical chemistry.

[2]  Jin-Ming Lin,et al.  A review on applications of chemiluminescence detection in food analysis. , 2010, Analytica chimica acta.

[3]  Jianzhong Lu,et al.  Magnetic bead-based chemiluminescent metal immunoassay with a colloidal gold label. , 2005, Analytical chemistry.

[4]  E. Ōsawa,et al.  Vertically aligned diamond nanowires for DNA sensing. , 2008, Angewandte Chemie.

[5]  M. Mascini,et al.  Aptamer-based detection of plasma proteins by an electrochemical assay coupled to magnetic beads. , 2007, Analytical chemistry.

[6]  Guodong Liu,et al.  Electrochemical quantification of single-nucleotide polymorphisms using nanoparticle probes. , 2007, Journal of the American Chemical Society.

[7]  Janelle L. Coutts,et al.  A one-step highly sensitive method for DNA detection using dynamic light scattering. , 2008, Journal of the American Chemical Society.

[8]  Chunyang Lei,et al.  Impedimetric aptasensor with femtomolar sensitivity based on the enlargement of surface-charged gold nanoparticles. , 2009, Analytical chemistry.

[9]  Cuiping Han,et al.  Dual-signal fenamithion probe by combining fluorescence with colorimetry based on Rhodamine B modified silver nanoparticles. , 2011, The Analyst.

[10]  Shulin Zhao,et al.  A sensitive gold nanoparticles sensing platform based on resonance energy transfer for chemiluminescence light on detection of biomolecules. , 2013, Biosensors & bioelectronics.

[11]  L. Staudt,et al.  Gene expression physiology and pathophysiology of the immune system. , 2001, Trends in immunology.

[12]  M F Kubik,et al.  Oligonucleotide inhibitors of human thrombin that bind distinct epitopes. , 1997, Journal of molecular biology.

[13]  Guo-Li Shen,et al.  Electrostatic interaction based approach to thrombin detection by surface-enhanced Raman spectroscopy. , 2009, Analytical chemistry.

[14]  T. G. Drummond,et al.  Electrochemical DNA sensors , 2003, Nature Biotechnology.

[15]  J. Justin Gooding,et al.  Electrochemical DNA Hybridization Biosensors , 2002 .

[16]  W. N. Burnette,et al.  "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A. , 1981, Analytical biochemistry.

[17]  Chad A Mirkin,et al.  Nanostructures in biodiagnostics. , 2005, Chemical reviews.

[18]  A. Bard,et al.  Electrogenerated chemiluminescence. 77. DNA hybridization detection at high amplification with [Ru(bpy)3]2+-containing microspheres. , 2004, Analytical chemistry.

[19]  H. Ju,et al.  Flow-through multianalyte chemiluminescent immunosensing system with designed substrate zone-resolved technique for sequential detection of tumor markers. , 2006, Analytical chemistry.

[20]  M. Bergeron,et al.  Amplification strategy using aggregates of ferrocene-containing cationic polythiophene for sensitive and specific electrochemical detection of DNA. , 2011, Analytical chemistry.

[21]  Tanyu Wang,et al.  Quantitation of femtomolar protein levels via direct readout with the electrochemical proximity assay. , 2012, Journal of the American Chemical Society.

[22]  Guodong Liu,et al.  Electrochemical coding technology for simultaneous detection of multiple DNA targets. , 2003, Journal of the American Chemical Society.

[23]  Jinghong Li,et al.  In situ amplified chemiluminescent detection of DNA and immunoassay of IgG using special-shaped gold nanoparticles as label. , 2006, Clinical chemistry.

[24]  N. Yang,et al.  Biofunctionalization of Vertically Aligned Diamond Nanowires , 2009 .

[25]  Xi Chen,et al.  Terminal protection of a small molecule-linked loop DNA probe for turn-on label-free fluorescence detection of proteins. , 2016, Biosensors & bioelectronics.

[26]  Yu-cong Wang,et al.  Silver nanoparticle-based ultrasensitive chemiluminescent detection of DNA hybridization and single-nucleotide polymorphisms. , 2006, Analytical chemistry.

[27]  Itamar Willner,et al.  Integrated nanoparticle-biomolecule hybrid systems: synthesis, properties, and applications. , 2004, Angewandte Chemie.

[28]  Chun-Yang Zhang,et al.  Improved sensitivity for the electrochemical biosensor with an adjunct probe. , 2010, Analytical chemistry.

[29]  Jaeyoung Lee,et al.  Nanoparticle-enhanced surface plasmon resonance detection of proteins at attomolar concentrations: comparing different nanoparticle shapes and sizes. , 2012, Analytical chemistry.

[30]  Sichun Zhang,et al.  Recent developments and applications of chemiluminescence sensors , 2005 .

[31]  X. Le,et al.  Aptamer capturing of enzymes on magnetic beads to enhance assay specificity and sensitivity. , 2011, Analytical chemistry.

[32]  Caifeng Ding,et al.  Ultrasensitive flow injection chemiluminescence detection of DNA hybridization using signal DNA probe modified with Au and CuS nanoparticles. , 2008, Analytical chemistry.

[33]  Ciara K O'Sullivan,et al.  Reagentless, reusable, ultrasensitive electrochemical molecular beacon aptasensor. , 2006, Journal of the American Chemical Society.

[34]  Joseph Wang Nanomaterial-based amplified transduction of biomolecular interactions. , 2005, Small.

[35]  G. Jie,et al.  Novel magnetic Fe3O4@CdSe composite quantum dot-based electrochemiluminescence detection of thrombin by a multiple DNA cycle amplification strategy. , 2012, Analytical chemistry.

[36]  I. Willner,et al.  Magnetically amplified DNA assays (MADA): sensing of viral DNA and single-base mismatches by using nucleic acid modified magnetic particles. , 2003, Angewandte Chemie.

[37]  Hongxia Li,et al.  Construction of DNA sandwich electrochemical biosensor with nanoPbS and nanoAu tags on magnetic microbeads. , 2009, Biosensors & bioelectronics.

[38]  Xiaohu Gao,et al.  Rapid multitarget immunomagnetic separation through programmable DNA linker displacement. , 2011, Journal of the American Chemical Society.

[39]  C. Mirkin,et al.  A fluorescence-based method for determining the surface coverage and hybridization efficiency of thiol-capped oligonucleotides bound to gold thin films and nanoparticles. , 2000, Analytical chemistry.

[40]  Joseph Wang,et al.  Potentiometric detection of DNA hybridization using enzyme-induced metallization and a silver ion selective electrode. , 2009, Analytical chemistry.

[41]  C. Mirkin,et al.  Nanoparticles with Raman spectroscopic fingerprints for DNA and RNA detection. , 2002, Science.

[42]  I. Willner,et al.  Amplified Microgravimetric Quartz-Crystal-Microbalance Assay of DNA Using Oligonucleotide-Functionalized Liposomes or Biotinylated Liposomes , 2000 .

[43]  Qiang Zhao,et al.  An aptamer-capture based chromogenic assay for thrombin. , 2012, Biosensors & bioelectronics.

[44]  H. Ju,et al.  Fluorescence resonance energy transfer between quantum dots and graphene oxide for sensing biomolecules. , 2010, Analytical chemistry.

[45]  Naomi J. Halas,et al.  Label-free detection of DNA hybridization using surface enhanced Raman spectroscopy. , 2010, Journal of the American Chemical Society.

[46]  Virendra V. Singh,et al.  DNA-probe-target interaction based detection of Brucella melitensis by using surface plasmon resonance. , 2017, Biosensors & bioelectronics.

[47]  Yi Xiao,et al.  Aptamer-functionalized Au nanoparticles for the amplified optical detection of thrombin. , 2004, Journal of the American Chemical Society.

[48]  Itamar Willner,et al.  Integrated nanoparticle-biomolecule systems for biosensing and bioelectronics. , 2007, Biosensors & bioelectronics.

[49]  Itamar Willner,et al.  Nucleic acid-functionalized Pt nanoparticles: Catalytic labels for the amplified electrochemical detection of biomolecules. , 2006, Analytical chemistry.

[50]  Sang Yup Lee,et al.  DNA microarray-based identification of bacterial and fungal pathogens in bloodstream infections. , 2010, Molecular and cellular probes.

[51]  X Chris Le,et al.  Aptamer-linked assay for thrombin using gold nanoparticle amplification and inductively coupled plasma-mass spectrometry detection. , 2009, Analytical chemistry.

[52]  A. Salimi,et al.  Amplified fluorescent sensing of DNA using luminescent carbon dots and AuNPs/GO as a sensing platform: A novel coupling of FRET and DNA hybridization for homogeneous HIV-1 gene detection at femtomolar level. , 2017, Biosensors & bioelectronics.

[53]  J. Mesirov,et al.  Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. , 1999, Science.

[54]  Tatsuro Endo,et al.  Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor. , 2005, Analytical chemistry.

[55]  Itamar Willner,et al.  Chemiluminescent and chemiluminescence resonance energy transfer (CRET) detection of DNA, metal ions, and aptamer-substrate complexes using hemin/G-quadruplexes and CdSe/ZnS quantum dots. , 2011, Journal of the American Chemical Society.

[56]  Guonan Chen,et al.  Preparation of protein-like silver-cysteine hybrid nanowires and application in ultrasensitive immunoassay of cancer biomarker. , 2013, Analytical chemistry.

[57]  G. Patonay,et al.  Molecular fluorescence, phosphorescence, and chemiluminescence spectrometry. , 1988, Analytical chemistry.

[58]  Zhiqiang Gao,et al.  Gold nanoparticle-enabled real-time ligation chain reaction for ultrasensitive detection of DNA. , 2012, Journal of the American Chemical Society.

[59]  Larry J. Kricka,et al.  Clinical applications of chemiluminescence , 2003 .

[60]  Y. Wine,et al.  Elucidation of the mechanism and end products of glutaraldehyde crosslinking reaction by X-ray structure analysis. , 2007, Biotechnology and bioengineering.

[61]  Itamar Willner,et al.  Pt nanoparticles functionalized with nucleic acid act as catalytic labels for the chemiluminescent detection of DNA and proteins. , 2006, Small.

[62]  J. Butler,et al.  Genetics and Genomics of Core Short Tandem Repeat Loci Used in Human Identity Testing , 2006, Journal of forensic sciences.