Expression of a Salt-Tolerant Pseudolysin in Yeast for Efficient Protein Hydrolysis under High-Salt Conditions

Protease biocatalysis in a high-salt environment is very attractive for applications in the detergent industry, the production of diagnostic kits, and traditional food fermentation. However, high-salt conditions can reduce protease activity or even inactivate enzymes. Herein, in order to explore new protease sources, we expressed a salt-tolerant pseudolysin of Pseudomonas aeruginosa SWJSS3 isolated from deep-sea mud in Saccharomyces cerevisiae. After optimizing the concentration of ion cofactors in yeast peptone dextrose (YPD) medium, the proteolytic activity in the supernatant was 2.41 times more than that in the control group when supplemented with 5 mM CaCl2 and 0.4 mM ZnCl2. The extracellular proteolytic activity of pseudolysin reached 258.95 U/mL with optimized expression cassettes. In addition, the S. cerevisiae expression system increased the salt tolerance of pseudolysin to sodium chloride (NaCl)and sodium dodecyl sulfate (SDS) and the recombinant pseudolysin retained 15.19% activity when stored in 3 M NaCl for 7 days. The recombinant pseudolysin was able to efficiently degrade the β-conglycinin from low-denatured soy protein isolates and glycinin from high-denatured soy protein isolates under high temperatures (60 °C) and high-salt (3 M NaCl) conditions. Our study provides a salt-tolerant recombinant protease with promising applications in protein hydrolysis under high-salt conditions.

[1]  Mouming Zhao,et al.  Secretion of collagenases by Saccharomyces cerevisiae for collagen degradation , 2022, Biotechnology for Biofuels and Bioproducts.

[2]  M. Molin,et al.  Engineering Saccharomyces cerevisiae for the production and secretion of Affibody molecules , 2021, Microbial Cell Factories.

[3]  W. V. van Zyl,et al.  Heterologous production of cellulose- and starch-degrading hydrolases to expand Saccharomyces cerevisiae substrate utilization: Lessons learnt. , 2021, Biotechnology advances.

[4]  D. Petranovic,et al.  Expression of antibody fragments in Saccharomyces cerevisiae strains evolved for enhanced protein secretion , 2021, Microbial Cell Factories.

[5]  S. Camarero,et al.  Design of an improved universal signal peptide based on the α-factor mating secretion signal for enzyme production in yeast , 2021, Cellular and molecular life sciences : CMLS.

[6]  Anil Kumar,et al.  Generation of antioxidant peptides from soy protein isolate through psychrotrophic Chryseobacterium sp. derived alkaline broad temperature active protease , 2021 .

[7]  Saroj K. Mishra,et al.  Differential role of segments of α-mating factor secretion signal in Pichia pastoris towards granulocyte colony-stimulating factor emerging from a wild type or codon optimized copy of the gene , 2020, Microbial Cell Factories.

[8]  Z. Anwar,et al.  Protease—A Versatile and Ecofriendly Biocatalyst with Multi-Industrial Applications: An Updated Review , 2020, Catalysis Letters.

[9]  Jianli Zhou,et al.  Activation of the Unfolded Protein Response via Co-expression of the HAC1i Gene Enhances Expression of Recombinant Elastase in Pichia pastoris , 2020, Biotechnology and Bioprocess Engineering.

[10]  Mouming Zhao,et al.  Formation and characterization of soy protein nanoparticles by controlled partial enzymatic hydrolysis , 2020 .

[11]  Yu Deng,et al.  Identification of the Genetic Requirements for Zinc Tolerance and Toxicity in Saccharomyces cerevisiae , 2019, G3: Genes, Genomes, Genetics.

[12]  T. Shinji,et al.  Characterization of an organic-solvent-stable elastase from Pseudomonas indica and its potential use in eggshell membrane hydrolysis , 2019, Process Biochemistry.

[13]  Haile Ma,et al.  Separation, biochemical characterization and salt-tolerant mechanisms of alkaline protease from Aspergillus oryzae. , 2019, Journal of the science of food and agriculture.

[14]  J. Goldberg,et al.  Pseudomonas aeruginosa in cystic fibrosis: A chronic cheater , 2019, Proceedings of the National Academy of Sciences.

[15]  P. Ferrer,et al.  An improved secretion signal enhances the secretion of model proteins from Pichia pastoris , 2018, Microbial Cell Factories.

[16]  Li Yuan,et al.  Fabrication, properties and applications of soy-protein-based materials: A review. , 2018, International journal of biological macromolecules.

[17]  Yunping Yao,et al.  Extracellular Proteome Analysis and Flavor Formation During Soy Sauce Fermentation , 2018, Front. Microbiol..

[18]  Neil D. Rawlings,et al.  The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database , 2017, Nucleic Acids Res..

[19]  Mingtao Huang,et al.  Efficient protein production by yeast requires global tuning of metabolism , 2017, Nature Communications.

[20]  F. Liu,et al.  Efficient Extracellular Expression of Metalloprotease for Z-Aspartame Synthesis. , 2016, Journal of agricultural and food chemistry.

[21]  Jian Chen,et al.  Improved catalytic efficiency, thermophilicity, anti-salt and detergent tolerance of keratinase KerSMD by partially truncation of PPC domain , 2016, Scientific Reports.

[22]  Shane A. Seabrook,et al.  Rational engineering of a mesohalophilic carbonic anhydrase to an extreme halotolerant biocatalyst , 2015, Nature Communications.

[23]  S. Zibek,et al.  Expression of a Codon-Optimized Carica papaya Papain Sequence in the Methylotrophic Yeast Pichia pastoris , 2015 .

[24]  I. Sylte,et al.  High-level expression of pseudolysin, the extracellular elastase of Pseudomonas aeruginosa, in Escherichia coli and its purification. , 2015, Protein expression and purification.

[25]  B. Hallström,et al.  Microfluidic screening and whole-genome sequencing identifies mutations associated with improved protein secretion by yeast , 2015, Proceedings of the National Academy of Sciences.

[26]  Fucheng Zhu,et al.  Highly efficient enzymatic synthesis of Z-aspartame in aqueous medium via in situ product removal , 2015 .

[27]  D. Schuppan,et al.  Identification of Pseudolysin (lasB) as an Aciduric Gluten-Degrading Enzyme with High Therapeutic Potential for Celiac Disease , 2015, The American Journal of Gastroenterology.

[28]  Zhao Mou-min The Isolation and Identification of Deep-sea Bacteria That Produce Salt-tolerant Proteases , 2015 .

[29]  Xiaobin Yu,et al.  Enhanced expression of recombinant elastase in Pichia pastoris through addition of N-glycosylation sites to the propeptide , 2014, Biotechnology Letters.

[30]  R. D. Castro,et al.  Antioxidant activities and functional properties of soy protein isolate hydrolysates obtained using microbial proteases , 2014 .

[31]  B. Schulz,et al.  Sequence-based protein stabilization in the absence of glycosylation , 2014, Nature Communications.

[32]  Xiaobin Yu,et al.  The role of N-glycosylation sites in the activity, stability, and expression of the recombinant elastase expressed by Pichia pastoris. , 2014, Enzyme and microbial technology.

[33]  G. Qin,et al.  Advances of Research on Glycinin and β-Conglycinin: A Review of Two Major Soybean Allergenic Proteins , 2014, Critical reviews in food science and nutrition.

[34]  Ronny Martínez,et al.  Insights on activity and stability of subtilisin E towards guanidinium chloride and sodium dodecylsulfate. , 2014, Journal of biotechnology.

[35]  Xiaobin Yu,et al.  Expression of the lasB gene encoding an organic solvent-stable elastase in Pichia pastoris and potential applications of the recombinant enzymes in peptide synthesis , 2013 .

[36]  E. Kessler Chapter 120 – Pseudolysin , 2013 .

[37]  Jens Nielsen,et al.  Different expression systems for production of recombinant proteins in Saccharomyces cerevisiae , 2012, Biotechnology and bioengineering.

[38]  Xinqing Zhao,et al.  Zinc and yeast stress tolerance: micronutrient plays a big role. , 2012, Journal of biotechnology.

[39]  M. Nasri,et al.  Pseudomonas aeruginosa A2 elastase: purification, characterization and biotechnological applications. , 2012, International journal of biological macromolecules.

[40]  U. Schwaneberg,et al.  Directed Evolution of Subtilisin E into a Highly Active and Guanidinium Chloride‐ and Sodium Dodecylsulfate‐Tolerant Protease , 2012, Chembiochem : a European journal of chemical biology.

[41]  W. Luo,et al.  Isolation and characterization of a keratinolytic protease from a feather-degrading bacterium Pseudomonas aeruginosa C11 , 2012 .

[42]  K. Aoki,et al.  Organic solvent-tolerant elastase efficiently hydrolyzes insoluble, cross-linked, protein fiber of eggshell membranes , 2012, Biotechnology Letters.

[43]  Lan Ye,et al.  Regulating Cytoplasmic Calcium Homeostasis Can Reduce Aluminum Toxicity in Yeast , 2011, PloS one.

[44]  D. Siddavattam,et al.  Enzymatic Depilation of Animal Hide: Identification of Elastase (LasB) from Pseudomonas aeruginosa MCM B-327 as a Depilating Protease , 2011, PloS one.

[45]  Chi-Huey Wong,et al.  Protein Native-State Stabilization by Placing Aromatic Side Chains in N-Glycosylated Reverse Turns , 2011, Science.

[46]  M. Nasri,et al.  A Solvent-Stable Metalloprotease Produced by Pseudomonas aeruginosa A2 Grown on Shrimp Shell Waste and Its Application in Chitin Extraction , 2011, Applied biochemistry and biotechnology.

[47]  Laxmikant R. Patil,et al.  Enrichment of Saccharomyces cerevisiae with zinc and their impact on cell growth , 2011 .

[48]  Collin M. Stultz,et al.  Perturbing the folding energy landscape of the bacterial immunity protein Im7 by site-specific N-linked glycosylation , 2010, Proceedings of the National Academy of Sciences.

[49]  Chuan-he Tang,et al.  Formation and characterization of amyloid-like fibrils from soy β-conglycinin and glycinin. , 2010, Journal of agricultural and food chemistry.

[50]  A. Bhuyan On the mechanism of SDS-induced protein denaturation. , 2010, Biopolymers.

[51]  Wentao Xu,et al.  Cloning, expression and characterization of recombinant elastase from Pseudomonas aeruginosa in Picha pastoris. , 2009, Protein Expression and Purification.

[52]  B. He,et al.  Screening and isolation of an organic solvent-tolerant bacterium for high-yield production of organic solvent-stable protease. , 2008, Bioresource technology.

[53]  M. Nasri,et al.  Purification, biochemical and molecular characterization of a metalloprotease from Pseudomonas aeruginosa MN7 grown on shrimp wastes , 2008, Applied Microbiology and Biotechnology.

[54]  Ying Ma,et al.  High-level expression, purification and characterization of recombinant Aspergillus oryzae alkaline protease in Pichia pastoris. , 2008, Protein expression and purification.

[55]  M. Yasuda,et al.  Effect of exchange of amino acid residues of the surface region of the PST-01 protease on its organic solvent-stability. , 2007, Biochemical and biophysical research communications.

[56]  A. Casamayor,et al.  Disruption of iron homeostasis in Saccharomyces cerevisiae by high zinc levels: a genome‐wide study , 2007, Molecular microbiology.

[57]  Dubravka Škevin,et al.  Optimization of bioprocess for production of copper-enriched biomass of industrially important microorganism Saccharomyces cerevisiae. , 2007, Journal of bioscience and bioengineering.

[58]  R. Schiestl,et al.  Frozen competent yeast cells that can be transformed with high efficiency using the LiAc/SS carrier DNA/PEG method , 2007, Nature Protocols.

[59]  E. Bosch,et al.  Critical micelle concentration of surfactants in aqueous buffered and unbuffered systems , 2005 .

[60]  S. Singh,et al.  One-step purification and characterization of an alkaline protease from haloalkaliphilic Bacillus sp. , 2005, Journal of chromatography. A.

[61]  Y. Teranishi,et al.  Identification of a gene conferring resistance to zinc and cadmium ions in the yeast Saccharomyces cerevisiae , 1989, Molecular and General Genetics MGG.

[62]  Barbara M. Bakker,et al.  Metabolic Engineering of Glycerol Production in Saccharomyces cerevisiae , 2002, Applied and Environmental Microbiology.

[63]  Søren Brunak,et al.  Prediction of Glycosylation Across the Human Proteome and the Correlation to Protein Function , 2001, Pacific Symposium on Biocomputing.

[64]  H. Ishikawa,et al.  Role of Intermolecular Disulfide Bonds of the Organic Solvent-Stable PST-01 Protease in Its Organic Solvent Stability , 2001, Applied and Environmental Microbiology.

[65]  Ishikawa,et al.  Cloning and sequencing of a gene of organic solvent-stable protease secreted from Pseudomonas aeruginosa PST-01 and its expression in Escherichia coli. , 2000, Biochemical engineering journal.

[66]  R. Raines,et al.  Increasing the secretory capacity of Saccharomyces cerevisiae for production of single-chain antibody fragments , 1998, Nature Biotechnology.

[67]  D. Eide The molecular biology of metal ion transport in Saccharomyces cerevisiae. , 1998, Annual review of nutrition.

[68]  H. Ishikawa,et al.  Organic solvent-tolerant bacterium which secretes an organic solvent-stable proteolytic enzyme , 1995, Applied and environmental microbiology.

[69]  K. Kitamura Genetic Improvement of Nutritional and Food Processing Quality in Soybean , 1994 .

[70]  D. Ohman,et al.  Substitution of active-site His-223 in Pseudomonas aeruginosa elastase and expression of the mutated lasB alleles in Escherichia coli show evidence for autoproteolytic processing of proelastase , 1991, Journal of bacteriology.

[71]  M. Levitt,et al.  Enhanced stability of subtilisin by three point mutations , 1991, Biotechnology and applied biochemistry.