Density functional embedding for molecular systems

We introduce a density functional based embedding method for the study of molecular systems in condensed phase. Molecular subunits are treated using a standard Kohn-Sham method together with an embedding potential derived from orbital-free density functional theory, by using kinetic energy functionals. The method leads to a linear scaling electronic structure approach that maps naturally onto massively parallel computers. The application of the method for a molecular dynamics simulation of water at ambient conditions results in a liquid with unstructured second solvation shell.

[1]  Vincent L. Lignères,et al.  Improving the orbital-free density functional theory description of covalent materials. , 2005, The Journal of chemical physics.

[2]  Chemical Accuracy Obtained in an Ab Initio Molecular Dynamics Simulation of a Fluid by Inclusion of a Three-Body Potential , 1998 .

[3]  Burke,et al.  Generalized Gradient Approximation Made Simple. , 1996, Physical review letters.

[4]  Michele Parrinello,et al.  Quickstep: Fast and accurate density functional calculations using a mixed Gaussian and plane waves approach , 2005, Comput. Phys. Commun..

[5]  Michele Parrinello,et al.  A hybrid Gaussian and plane wave density functional scheme , 1997 .

[6]  Parr,et al.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.

[7]  W. V. van Gunsteren,et al.  Charge-on-spring polarizable water models revisited: from water clusters to liquid water to ice. , 2004, The Journal of chemical physics.

[8]  Matthias Krack,et al.  Water structure as a function of temperature from X-ray scattering experiments and ab initio molecular dynamics , 2003 .

[9]  T. Halgren,et al.  Polarizable force fields. , 2001, Current opinion in structural biology.

[10]  S. Goedecker,et al.  Relativistic separable dual-space Gaussian pseudopotentials from H to Rn , 1998, cond-mat/9803286.

[11]  P. Madden,et al.  Order N ab initio Molecular Dynamics with an Orbital-Free Density Functional , 1993 .

[12]  Joost VandeVondele,et al.  The influence of temperature and density functional models in ab initio molecular dynamics simulation of liquid water. , 2005, The Journal of chemical physics.

[13]  A. Becke,et al.  Density-functional exchange-energy approximation with correct asymptotic behavior. , 1988, Physical review. A, General physics.

[14]  Calculation of bulk properties of liquids and supercritical fluids from pure theory , 1999 .

[15]  W. Kohn,et al.  Self-Consistent Equations Including Exchange and Correlation Effects , 1965 .

[16]  A. Lembarki,et al.  Obtaining a gradient-corrected kinetic-energy functional from the Perdew-Wang exchange functional. , 1994, Physical review. A, Atomic, molecular, and optical physics.

[17]  Parr,et al.  Conjoint gradient correction to the Hartree-Fock kinetic- and exchange-energy density functionals. , 1991, Physical review. A, Atomic, molecular, and optical physics.

[18]  S. F. Boys,et al.  The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors , 1970 .

[19]  Tomasz Adam Wesolowski,et al.  Generalization of the Kohn–Sham equations with constrained electron density formalism and its time‐dependent response theory formulation , 2004 .

[20]  J. Perdew,et al.  Density-functional approximation for the correlation energy of the inhomogeneous electron gas. , 1986, Physical review. B, Condensed matter.

[21]  A. Warshel,et al.  Frozen density functional approach for ab initio calculations of solvated molecules , 1993 .

[22]  P. Hohenberg,et al.  Inhomogeneous Electron Gas , 1964 .

[23]  M. Sprik,et al.  Molecular dynamics study of electron gas models for liquid water , 2003 .

[24]  T. Wesołowski Density Functional Theory with approximate kinetic energy functionals applied to hydrogen bonds , 1997 .

[25]  Bin Chen,et al.  Liquid Water from First Principles: Investigation of Different Sampling Approaches , 2004 .

[26]  Teter,et al.  Separable dual-space Gaussian pseudopotentials. , 1996, Physical review. B, Condensed matter.

[27]  Johannes Grotendorst,et al.  Modern methods and algorithms of quantum chemistry , 2000 .

[28]  R. Parr Density-functional theory of atoms and molecules , 1989 .

[29]  W. Thiel,et al.  Hybrid Models for Combined Quantum Mechanical and Molecular Mechanical Approaches , 1996 .

[30]  Johannes Neugebauer,et al.  The merits of the frozen-density embedding scheme to model solvatochromic shifts. , 2005, The Journal of chemical physics.

[31]  D. Bird,et al.  Density-functional embedding using a plane-wave basis , 2000, 0909.5491.

[32]  Cortona,et al.  Self-consistently determined properties of solids without band-structure calculations. , 1991, Physical review. B, Condensed matter.

[33]  Force Field Modelling of Conformational Energies , 2004 .