Identification of Alzheimer's disease-associated rare coding variants in the ECE2 gene.

Accumulation of amyloid β protein (Aβ) due to increased generation and/or impaired degradation plays an important role in Alzheimer's disease (AD) pathogenesis. In this report, we describe the identification of rare coding mutations in the endothelin-converting enzyme 2 (ECE2) gene in 1 late-onset AD family, and additional case-control cohort analysis indicates ECE2 variants associated with the risk of developing AD. The 2 mutations (R186C and F751S) located in the peptidase domain in the ECE2 protein were found to severely impair the enzymatic activity of ECE2 in Aβ degradation. We further evaluated the effect of the R186C mutation in mutant APP-knockin mice. Overexpression of wild-type ECE2 in the hippocampus reduced amyloid load and plaque formation, and improved learning and memory deficits in the AD model mice. However, the effect was abolished by the R186C mutation in ECE2. Taken together, the results demonstrated that ECE2 peptidase mutations contribute to AD pathogenesis by impairing Aβ degradation, and overexpression of ECE2 alleviates AD phenotypes. This study indicates that ECE2 is a risk gene for AD development and pharmacological activation of ECE2 could be a promising strategy for AD treatment.

[1]  Eden R Martin,et al.  Genetic meta-analysis of diagnosed Alzheimer’s disease identifies new risk loci and implicates Aβ, tau, immunity and lipid processing , 2019, Nature Genetics.

[2]  M. Fornage,et al.  Whole exome sequencing study identifies novel rare and common Alzheimer’s-Associated variants involved in immune response and transcriptional regulation , 2018, Molecular Psychiatry.

[3]  Yi Zhang,et al.  Performance evaluation of pathogenicity-computation methods for missense variants , 2018, Nucleic acids research.

[4]  C. Rankin,et al.  A presenilin-1 mutation causes Alzheimer disease without affecting Notch signaling , 2018, Molecular Psychiatry.

[5]  R. Redon,et al.  Contribution to Alzheimer's disease risk of rare variants in TREM2, SORL1, and ABCA7 in 1779 cases and 1273 controls , 2017, Neurobiology of Aging.

[6]  Weihong Song,et al.  BACE1 Cleavage Site Selection Critical for Amyloidogenesis and Alzheimer's Pathogenesis , 2017, The Journal of Neuroscience.

[7]  Weihong Song,et al.  Islet amyloid polypeptide: Another key molecule in Alzheimer’s pathogenesis? , 2017, Progress in Neurobiology.

[8]  Jia Gu,et al.  AfterQC: automatic filtering, trimming, error removing and quality control for fastq data , 2017, BMC Bioinformatics.

[9]  C. Eckman,et al.  Major amyloid-β–degrading enzymes, endothelin-converting enzyme-2 and neprilysin, are expressed by distinct populations of GABAergic interneurons in hippocampus and neocortex , 2016, Neurobiology of Aging.

[10]  Michelle K. Lupton,et al.  Influence of Coding Variability in APP-Aβ Metabolism Genes in Sporadic Alzheimer’s Disease , 2016, PloS one.

[11]  Ricardo Villamarín-Salomón,et al.  ClinVar: public archive of interpretations of clinically relevant variants , 2015, Nucleic Acids Res..

[12]  R. Quirion,et al.  Regional and sub-regional differences in hippocampal GABAergic neuronal vulnerability in the TgCRND8 mouse model of Alzheimer's disease , 2015, Front. Aging Neurosci..

[13]  J. Haines,et al.  A rare mutation in UNC5C predisposes to late-onset Alzheimer's disease and increases neuronal cell death , 2014, Nature Medicine.

[14]  J. McLaurin,et al.  α-Melanocyte Stimulating Hormone Prevents GABAergic Neuronal Loss and Improves Cognitive Function in Alzheimer's Disease , 2014, The Journal of Neuroscience.

[15]  S. Itohara,et al.  Single App knock-in mouse models of Alzheimer's disease , 2014, Nature Neuroscience.

[16]  Nick C Fox,et al.  Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease , 2013, Nature Genetics.

[17]  M. Staufenbiel,et al.  Amyloid‐β protein (Aβ) Glu11 is the major β‐secretase site of β‐site amyloid‐β precursor protein‐cleaving enzyme 1(BACE1), and shifting the cleavage site to Aβ Asp1 contributes to Alzheimer pathogenesis , 2013, The European journal of neuroscience.

[18]  A. Hofman,et al.  Variant of TREM2 associated with the risk of Alzheimer's disease. , 2013, The New England journal of medicine.

[19]  Ayae Kinoshita,et al.  Inhibition of GSK3β-mediated BACE1 expression reduces Alzheimer-associated phenotypes. , 2013, The Journal of clinical investigation.

[20]  E. Eckman,et al.  Endothelin-converting Enzymes Degrade Intracellular β-Amyloid Produced within the Endosomal/Lysosomal Pathway and Autophagosomes* , 2013, The Journal of Biological Chemistry.

[21]  P. Dutar,et al.  Somatostatinergic systems: an update on brain functions in normal and pathological aging , 2012, Front. Endocrin..

[22]  I. Deary,et al.  The role of ECE1 variants in cognitive ability in old age and Alzheimer's disease risk , 2012, American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics.

[23]  Lars Bertram,et al.  Relationship between genetic risk factors and markers for Alzheimer's disease pathology. , 2012, Biomarkers in medicine.

[24]  M. Rieder,et al.  Optimal unified approach for rare-variant association testing with application to small-sample case-control whole-exome sequencing studies. , 2012, American journal of human genetics.

[25]  R. Rodriguiz,et al.  Mice deficient in endothelin‐converting enzyme‐2 exhibit abnormal responses to morphine and altered peptide levels in the spinal cord , 2011, Journal of neurochemistry.

[26]  K. Xia,et al.  Identification of PRRT2 as the causative gene of paroxysmal kinesigenic dyskinesias , 2011, Brain : a journal of neurology.

[27]  Xin Jin,et al.  TGM6 identified as a novel causative gene of spinocerebellar ataxias using exome sequencing. , 2010, Brain : a journal of neurology.

[28]  Jana Marie Schwarz,et al.  MutationTaster evaluates disease-causing potential of sequence alterations , 2010, Nature Methods.

[29]  P. Bork,et al.  A method and server for predicting damaging missense mutations , 2010, Nature Methods.

[30]  S. Love,et al.  Endothelin-converting enzyme-2 is increased in Alzheimer's disease and up-regulated by Abeta. , 2009, The American journal of pathology.

[31]  N. Muzyczka,et al.  Adeno-associated viral (AAV) serotype 5 vector mediated gene delivery of endothelin-converting enzyme reduces Abeta deposits in APP + PS1 transgenic mice. , 2008, Molecular therapy : the journal of the American Society of Gene Therapy.

[32]  M. Owen,et al.  SORL1 variants and risk of late-onset Alzheimer’s disease , 2008, Neurobiology of Disease.

[33]  Hong Qing,et al.  Hypoxia facilitates Alzheimer's disease pathogenesis by up-regulating BACE1 gene expression , 2006, Proceedings of the National Academy of Sciences.

[34]  J. F. López-Téllez,et al.  Early neuropathology of somatostatin/NPY GABAergic cells in the hippocampus of a PS1×APP transgenic model of Alzheimer's disease , 2006, Neurobiology of Aging.

[35]  H. Qing,et al.  Degradation of BACE by the ubiquitin‐proteasome pathway , 2004, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[36]  R. Petersen,et al.  Genetic variants in a haplotype block spanning IDE are significantly associated with plasma Aβ42 levels and risk for Alzheimer disease , 2004, Human mutation.

[37]  L. Devi,et al.  Characterization of Endothelin-converting Enzyme-2 , 2003, The Journal of Biological Chemistry.

[38]  L. Marlow,et al.  Alzheimer's Disease β-Amyloid Peptide Is Increased in Mice Deficient in Endothelin-converting Enzyme* , 2003, The Journal of Biological Chemistry.

[39]  C. Iadecola,et al.  Cerebrovascular autoregulation is profoundly impaired in mice overexpressing amyloid precursor protein. , 2002, American journal of physiology. Heart and circulatory physiology.

[40]  M. Matsuo,et al.  Molecular isolation and characterization of novel four subisoforms of ECE-2. , 2002, Biochemical and biophysical research communications.

[41]  George A. Carlson,et al.  Alterations in Cerebral Blood Flow and Glucose Utilization in Mice Overexpressing the Amyloid Precursor Protein , 2002, Neurobiology of Disease.

[42]  A. Igarashi,et al.  Angiotensin-converting Enzyme Degrades Alzheimer Amyloid β-Peptide (Aβ); Retards Aβ Aggregation, Deposition, Fibril Formation; and Inhibits Cytotoxicity* , 2001, The Journal of Biological Chemistry.

[43]  C. Eckman,et al.  Degradation of the Alzheimer's Amyloid β Peptide by Endothelin-converting Enzyme* , 2001, The Journal of Biological Chemistry.

[44]  T. Saido,et al.  Metabolic Regulation of Brain Aβ by Neprilysin , 2001, Science.

[45]  S. Henikoff,et al.  Predicting deleterious amino acid substitutions. , 2001, Genome research.

[46]  W. Jagust Neuroimaging in dementia. , 2000, Neurologic clinics.

[47]  M. Mullan,et al.  Characteristics of thein VitroVasoactivity of β-Amyloid Peptides , 1998, Experimental Neurology.

[48]  K. Tanzawa,et al.  Rat endothelin-converting enzyme-1 forms a dimer through Cys412 with a similar catalytic mechanism and a distinct substrate binding mechanism compared with neutral endopeptidase-24.11. , 1996, The Biochemical journal.

[49]  M. Yanagisawa,et al.  ECE-1: A membrane-bound metalloprotease that catalyzes the proteolytic activation of big endothelin-1 , 1994, Cell.

[50]  G. Glenner,et al.  Alzheimer's disease: Initial report of the purification and characterization of a novel cerebrovascular amyloid protein , 1984 .

[51]  S. Folstein,et al.  “Mini-mental state”: A practical method for grading the cognitive state of patients for the clinician , 1975 .

[52]  J. Jia,et al.  Mini-Mental State Examination in Elderly Chinese: A Population-Based Normative Study. , 2016, Journal of Alzheimer's disease : JAD.

[53]  Seunggeun Lee,et al.  An efficient resampling method for calibrating single and gene-based rare variant association analysis in case-control studies. , 2016, Biostatistics.

[54]  P. S. St George-Hyslop,et al.  This month in archives of neurology. , 2012, Archives of neurology.

[55]  Claude-Alain H. Roten,et al.  Theoretical and practical advances in genome halving , 2004 .

[56]  M. Mullan,et al.  Characteristics of the in vitro vasoactivity of beta-amyloid peptides. , 1998, Experimental neurology.

[57]  R N Kalaria,et al.  Cerebral vessels in ageing and Alzheimer's disease. , 1996, Pharmacology & therapeutics.

[58]  M Haupt,et al.  [Clinical diagnosis of Alzheimer's disease]. , 1988, Deutsche medizinische Wochenschrift.