The biological impact of mass-spectrometry-based proteomics
暂无分享,去创建一个
[1] B. Causier. Studying the interactome with the yeast two-hybrid system and mass spectrometry. , 2004, Mass spectrometry reviews.
[2] F. Pineda,et al. Molecular complexity of sexual development and gene regulation in Plasmodium falciparum. , 2004, International journal for parasitology.
[3] S. Gygi,et al. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags , 1999, Nature Biotechnology.
[4] J. Rush,et al. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells , 2005, Nature Biotechnology.
[5] J. García,et al. Functional and quantitative proteomics using SILAC in cancer research , 2008 .
[6] S. Hanash,et al. Disease proteomics , 2003, Nature.
[7] M. Mann,et al. Organellar proteomics: turning inventories into insights , 2006, EMBO reports.
[8] M. Snyder,et al. Protein microarray technology , 2006, Mechanisms of Ageing and Development.
[9] E. Strickland,et al. Localization and Suppression of a Kinetic Defect in Cystic Fibrosis Transmembrane Conductance Regulator Folding* , 1997, The Journal of Biological Chemistry.
[10] Juri Rappsilber,et al. Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex , 1998, Nature Genetics.
[11] J. Hoeijmakers,et al. Sublimiting concentration of TFIIH transcription/DNA repair factor causes TTD-A trichothiodystrophy disorder , 2000, Nature Genetics.
[12] B. Chait,et al. The Yeast Nuclear Pore Complex: Composition, Architecture, and Transport Mechanism , 2000 .
[13] J. Yates. Mass spectral analysis in proteomics. , 2004, Annual review of biophysics and biomolecular structure.
[14] M. Mann,et al. Identifying and quantifying in vivo methylation sites by heavy methyl SILAC , 2004, Nature Methods.
[15] S. Hanash. Disease proteomics : Proteomics , 2003 .
[16] B. Coulombe,et al. Interaction Networks of the Molecular Machines That Decode, Replicate, and Maintain the Integrity of the Human Genome * , 2004, Molecular & Cellular Proteomics.
[17] R. Aebersold,et al. A new, tenth subunit of TFIIH is responsible for the DNA repair syndrome trichothiodystrophy group A , 2004, Nature Genetics.
[18] R. Aebersold,et al. Identification of TFB5, a new component of general transcription and DNA repair factor IIH , 2004, Nature Genetics.
[19] M. Mann,et al. Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks , 2006, Cell.
[20] J. Whisstock,et al. Prediction of protein function from protein sequence and structure , 2003, Quarterly Reviews of Biophysics.
[21] Susan S. Taylor,et al. Phosphorylation and inactivation of BAD by mitochondria-anchored protein kinase A. , 1999, Molecular cell.
[22] Michael Y. Galperin,et al. 'Conserved hypothetical' proteins: prioritization of targets for experimental study. , 2004, Nucleic acids research.
[23] T. Hunter,et al. The Protein Kinase Complement of the Human Genome , 2002, Science.
[24] Richard D. LeDuc,et al. New and automated MSn approaches for top-down identification of modified proteins , 2005, Journal of the American Society for Mass Spectrometry.
[25] Sean R. Collins,et al. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae , 2006, Nature.
[26] Nasreen S Jessani,et al. The development and application of methods for activity-based protein profiling. , 2004, Current opinion in chemical biology.
[27] S. Elledge,et al. BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures. , 2000, Genes & development.
[28] D. Cyr,et al. The Hsc70 co-chaperone CHIP targets immature CFTR for proteasomal degradation , 2000, Nature Cell Biology.
[29] Steven P Gygi,et al. Abraxas and RAP80 Form a BRCA1 Protein Complex Required for the DNA Damage Response , 2007, Science.
[30] Norbert Perrimon,et al. Applications of High-Throughput RNA Interference Screens to Problems in Cell and Developmental Biology , 2007, Genetics.
[31] R. Gillies,et al. Why do cancers have high aerobic glycolysis? , 2004, Nature Reviews Cancer.
[32] N. Grishin,et al. Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. , 2006, Molecular cell.
[33] Giulio Superti-Furga,et al. A physical and functional map of the human TNF-α/NF-κB signal transduction pathway , 2004, Nature Cell Biology.
[34] Reuven Agami,et al. A large-scale RNAi screen in human cells identifies new components of the p53 pathway , 2004, Nature.
[35] J. Kelly,et al. The integration of cell and chemical biology in protein folding , 2006, Nature chemical biology.
[36] S. Kaushal,et al. Quality control of integral membrane proteins. , 2004, Trends in biochemical sciences.
[37] Nasreen S Jessani,et al. A streamlined platform for high-content functional proteomics of primary human specimens , 2005, Nature Methods.
[38] John D. Venable,et al. Hsp90 Cochaperone Aha1 Downregulation Rescues Misfolding of CFTR in Cystic Fibrosis , 2006, Cell.
[39] J. Riordan,et al. Assembly of functional CFTR chloride channels. , 2005, Annual review of physiology.
[40] Richard D. Smith,et al. Utility of accurate mass tags for proteome-wide protein identification. , 2000, Analytical chemistry.
[41] B. A. Ballif,et al. ATM and ATR Substrate Analysis Reveals Extensive Protein Networks Responsive to DNA Damage , 2007, Science.
[42] R. Aebersold,et al. Mass spectrometry-based proteomics , 2003, Nature.
[43] A. Krainer,et al. SR proteins function in coupling RNAP II transcription to pre-mRNA splicing. , 2007, Molecular cell.
[44] Pauline Ward,et al. Protein kinases of the human malaria parasite Plasmodium falciparum: the kinome of a divergent eukaryote , 2004, BMC Genomics.
[45] Nasreen S Jessani,et al. Enzyme activity profiles of the secreted and membrane proteome that depict cancer cell invasiveness , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[46] Steven P Gygi,et al. A proteomics approach to understanding protein ubiquitination , 2003, Nature Biotechnology.
[47] J. Riordan,et al. Perturbation of Hsp90 interaction with nascent CFTR prevents its maturation and accelerates its degradation by the proteasome , 1998, The EMBO journal.
[48] P. Greengard,et al. Quantitative analysis of protein phosphorylation in mouse brain by hypothesis-driven multistage mass spectrometry. , 2005, Analytical chemistry.
[49] J. Yates,et al. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. , 2004, Analytical chemistry.
[50] X. Wang. The expanding role of mitochondria in apoptosis. , 2001, Genes & development.
[51] Stephen W Michnick,et al. Proteomics in living cells. , 2004, Drug discovery today.
[52] A. Saghatelian,et al. Assignment of endogenous substrates to enzymes by global metabolite profiling. , 2004, Biochemistry.
[53] Forest M White,et al. Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma , 2007, Proceedings of the National Academy of Sciences.
[54] Neil L Kelleher,et al. Pervasive combinatorial modification of histone H3 in human cells , 2007, Nature Methods.
[55] B. Cravatt,et al. Activity-based protein profiling: the serine hydrolases. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[56] S. Gygi,et al. Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[57] Dale L Boger,et al. Discovering potent and selective reversible inhibitors of enzymes in complex proteomes , 2003, Nature Biotechnology.
[58] M. Vidal,et al. Interactome: gateway into systems biology. , 2005, Human molecular genetics.
[59] Y. Shiloh. The ATM-mediated DNA-damage response: taking shape. , 2006, Trends in biochemical sciences.
[60] Scott B Ficarro,et al. Probing the dynamics of O-GlcNAc glycosylation in the brain using quantitative proteomics. , 2007, Nature chemical biology.
[61] H. Tissenbaum,et al. Reproduction and longevity: secrets revealed by C. elegans. , 2007, Trends in cell biology.
[62] C. Kenyon,et al. A C. elegans mutant that lives twice as long as wild type , 1993, Nature.
[63] J. Yates,et al. Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis. , 2004, Analytical chemistry.
[64] J. Yates,et al. Large-scale analysis of the yeast proteome by multidimensional protein identification technology , 2001, Nature Biotechnology.
[65] Tao Xu,et al. Quantitative Mass Spectrometry Identifies Insulin Signaling Targets in C. elegans , 2007, Science.
[66] F. Cross,et al. Accurate quantitation of protein expression and site-specific phosphorylation. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[67] Matthias Mann,et al. Proteome Analysis of Separated Male and Female Gametocytes Reveals Novel Sex-Specific Plasmodium Biology , 2005, Cell.
[68] A. Saghatelian,et al. An enzyme that regulates ether lipid signaling pathways in cancer annotated by multidimensional profiling. , 2006, Chemistry & biology.
[69] S. Elledge,et al. Identification of the FANCI Protein, a Monoubiquitinated FANCD2 Paralog Required for DNA Repair , 2007, Cell.
[70] John I. Clark,et al. Shotgun identification of protein modifications from protein complexes and lens tissue , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[71] John D. Venable,et al. Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra , 2004, Nature Methods.
[72] R. Aebersold,et al. Mass Spectrometry and Protein Analysis , 2006, Science.
[73] J. L. Petersen,et al. REX1, a Novel Gene Required for DNA Repair* , 2003, Journal of Biological Chemistry.
[74] Gavin MacBeath,et al. Protein microarrays and proteomics , 2002, Nature Genetics.
[75] J. Burbaum,et al. Direct visualization of serine hydrolase activities in complex proteomes using fluorescent active site‐directed probes , 2001, Proteomics.
[76] S. R. Datta,et al. BAD and glucokinase reside in a mitochondrial complex that integrates glycolysis and apoptosis , 2003, Nature.
[77] R. Stevens,et al. Global Efforts in Structural Genomics , 2001, Science.