Engineered promoters enable constant gene expression at any copy number in bacteria
暂无分享,去创建一个
[1] H. Bujard,et al. Transcription from efficient promoters can interfere with plasmid replication and diminish expression of plasmid specified genes. , 1982, The EMBO journal.
[2] W. Weigand,et al. Effects of recombinant plasmid size on cellular processes in Escherichia coli. , 1987, Plasmid.
[3] S. Lin-Chao,et al. High copy number of the pUC plasmid results from a Rom/Rop‐suppressible point mutation in RNA II , 1992, Molecular microbiology.
[4] J. Corchero,et al. Plasmid maintenance in Escherichia coli recombinant cultures is dramatically, steadily, and specifically influenced by features of the encoded proteins. , 1998, Biotechnology and bioengineering.
[5] Eduardo D. Sontag,et al. Mathematical control theory: deterministic finite dimensional systems (2nd ed.) , 1998 .
[6] J. Keasling,et al. mRNA stability and plasmid copy number effects on gene expression from an inducible promoter system. , 1998, Biotechnology and bioengineering.
[7] G. Węgrzyn. Replication of plasmids during bacterial response to amino acid starvation. , 1999, Plasmid.
[8] J. Pogliano,et al. Compatible bacterial plasmids are targeted to independent cellular locations in Escherichia coli , 2002, The EMBO journal.
[9] S. Shen-Orr,et al. Network motifs in the transcriptional regulation network of Escherichia coli , 2002, Nature Genetics.
[10] S. Mangan,et al. Structure and function of the feed-forward loop network motif , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[11] S. Mangan,et al. The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks. , 2003, Journal of molecular biology.
[12] H. Bremer,et al. Effect of the bacterial growth rate on replication control of plasmid pBR322 in Escherichia coli , 1986, Molecular and General Genetics MGG.
[13] J. Beckwith,et al. Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives , 1986, Molecular and General Genetics MGG.
[14] T. Kitten,et al. An improved arbitrary primed PCR method for rapid characterization of transposon insertion sites. , 2005, Journal of microbiological methods.
[15] F. Schmidt. Optimization and scale up of industrial fermentation processes , 2005, Applied Microbiology and Biotechnology.
[16] R. H. Pritchard,et al. The effect of gene concentration and relative gene dosage on gene output inEscherichia coli , 2006, Molecular and General Genetics MGG.
[17] Jaai Kim,et al. Absolute and relative QPCR quantification of plasmid copy number in Escherichia coli. , 2006, Journal of biotechnology.
[18] Brian F. Pfleger,et al. Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes , 2006, Nature Biotechnology.
[19] Christopher A. Voigt,et al. Genetic parts to program bacteria. , 2006, Current opinion in biotechnology.
[20] F. Blattner,et al. Emergent Properties of Reduced-Genome Escherichia coli , 2006, Science.
[21] Frances H Arnold,et al. Synthetic gene circuits: design with directed evolution. , 2007, Annual review of biophysics and biomolecular structure.
[22] A. van Oudenaarden,et al. MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals. , 2007, Molecular cell.
[23] G. Phillips,et al. New pSC101-derivative cloning vectors with elevated copy numbers. , 2008, Plasmid.
[24] T. Hwa,et al. Growth Rate-Dependent Global Effects on Gene Expression in Bacteria , 2009, Cell.
[25] U. Alon,et al. The incoherent feedforward loop can provide fold-change detection in gene regulation. , 2009, Molecular cell.
[26] W. Lim,et al. Defining Network Topologies that Can Achieve Biochemical Adaptation , 2009, Cell.
[27] Brian Ingalls,et al. Considerations for using integral feedback control to construct a perfectly adapting synthetic gene network. , 2010, Journal of theoretical biology.
[28] D. Chatenay,et al. Plasmid copy number noise in monoclonal populations of bacteria. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.
[29] J. Kittleson,et al. Rapid optimization of gene dosage in E. coli using DIAL strains , 2011, Journal of biological engineering.
[30] G. Church,et al. Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription. , 2011, Nature biotechnology.
[31] Zhen Xie,et al. Molecular Systems Biology Peer Review Process File Synthetic Incoherent Feed-forward Circuits Show Adaptation to the Amount of Their Genetic Template. Transaction Report , 2022 .
[32] Christopher A. Voigt,et al. Genetic circuit performance under conditions relevant for industrial bioreactors. , 2012, ACS synthetic biology.
[33] J. Keasling. Synthetic biology and the development of tools for metabolic engineering. , 2012, Metabolic engineering.
[34] A. Arkin,et al. Contextualizing context for synthetic biology – identifying causes of failure of synthetic biological systems , 2012, Biotechnology journal.
[35] Han N. Lim,et al. Regulatory consequences of gene translocation in bacteria , 2012, Nucleic acids research.
[36] Gabriel C. Wu,et al. Successes and failures in modular genetic engineering. , 2012, Current Opinion in Chemical Biology.
[37] Vivek K. Mutalik,et al. Composability of regulatory sequences controlling transcription and translation in Escherichia coli , 2013, Proceedings of the National Academy of Sciences.
[38] Christopher A. Voigt,et al. Advances in genetic circuit design: novel biochemistries, deep part mining, and precision gene expression. , 2013, Current opinion in chemical biology.
[39] Adam Paul Arkin,et al. A wise consistency: engineering biology for conformity, reliability, predictability. , 2013, Current opinion in chemical biology.
[40] Tetsushi Sakuma,et al. Repeating pattern of non-RVD variations in DNA-binding modules enhances TALEN activity , 2013, Scientific Reports.
[41] Christopher A. Voigt,et al. Genomic Mining of Prokaryotic Repressors for Orthogonal Logic Gates , 2013, Nature chemical biology.
[42] V. de Lorenzo,et al. New Transposon Tools Tailored for Metabolic Engineering of Gram-Negative Microbial Cell Factories , 2014, Front. Bioeng. Biotechnol..
[43] Swapnil Bhatia,et al. Functional optimization of gene clusters by combinatorial design and assembly , 2014, Nature Biotechnology.
[44] Pamela A. Silver,et al. Rapid construction of insulated genetic circuits via synthetic sequence-guided isothermal assembly , 2013, Nucleic acids research.
[45] H. Salis,et al. Efficient search, mapping, and optimization of multi‐protein genetic systems in diverse bacteria , 2014 .
[46] David H Burkhardt,et al. Quantifying Absolute Protein Synthesis Rates Reveals Principles Underlying Allocation of Cellular Resources , 2014, Cell.
[47] Thomas E Gorochowski,et al. Memory and Combinatorial Logic Based on DNA Inversions: Dynamics and Evolutionary Stability. , 2015, ACS synthetic biology.
[48] Benjamin R. Jack,et al. Predicting the Genetic Stability of Engineered DNA Sequences with the EFM Calculator. , 2015, ACS synthetic biology.
[49] Jeffry D. Sander,et al. Context influences on TALE–DNA binding revealed by quantitative profiling , 2015, Nature Communications.
[50] Brian F Pfleger,et al. A transcription activator-like effector induction system mediated by proteolysis , 2016, Nature chemical biology.