Comparison of different methods for corn LAI estimation over northeastern China

Leaf area index (LAI) is a crucial variable in all kinds of ecosystem, climate and crop yield models, describing the fluxes of energy, mass and momentum between the surface and the planetary boundary layer. To accurately determine the corn LAI, several methods of LAI estimation have been evaluated in this investigation, including vegetation indices, principal component analysis (PCA), the neural network method (NN), the look-up table (LUT) inversion from PROSAIL model and the Hybrid model. Comparisons were conducted based on field-measured corn canopy hyperspectral reflectance and LAI data over northeastern China. In order to fairly compare the LAI estimation performance of different methods, the groundmeasured data were separated into two sets (modeling data and validation data), except the LUT and hybrid methods of PROSAIL-based. The results indicated that the PCA method delivered the best performance for corn LAI estimation (with maximum R2 = 0.814 and minimum RMSE = 0.501) in this study. The hybrid model and EVI provided moderate results. Comparatively, the LUT and NN methods were less successful and NDVI provided the worst corn LAI estimation performance in this study. The PCA method shows great potential for performing well on corn LAI estimation from hyperspectral information. PCA can avoid the reflectance saturation defect of dense canopy in a certain extent, can utilize hyperspectral reflectance data much more effectively than other methods, and is not limited by the band numbers, it can also reduce noise and provide an great correlation with LAI from the hyperbands or the multibands reflectance.

[1]  John R. Miller,et al.  Assessing vineyard condition with hyperspectral indices: Leaf and canopy reflectance simulation in a row-structured discontinuous canopy , 2005 .

[2]  Vladimir M. Krasnopolsky,et al.  Some neural network applications in environmental sciences. Part II: advancing computational efficiency of environmental numerical models , 2003, Neural Networks.

[3]  Yuri Knyazikhin,et al.  Retrieval of canopy biophysical variables from bidirectional reflectance Using prior information to solve the ill-posed inverse problem , 2003 .

[4]  S. T. Gower,et al.  Leaf area index of boreal forests: theory, techniques, and measurements , 1997 .

[5]  Stefan Erasmi,et al.  A physically based approach to model LAI from MODIS 250 m data in a tropical region , 2010, Int. J. Appl. Earth Obs. Geoinformation.

[6]  Kenlo Nishida Nasahara,et al.  Utility of spectral vegetation indices for estimation of light conversion efficiency in coniferous forests in Japan , 2008 .

[7]  Ralf Jaumann,et al.  Reduction of instrument-dependent noise in hyperspectral image data using the principal component analysis: Applications to Galileo NIMS data , 2008 .

[8]  Michael T. Manry,et al.  Attributes of neural networks for extracting continuous vegetation variables from optical and radar , 1998 .

[9]  J. Chen,et al.  Retrieving Leaf Area Index of Boreal Conifer Forests Using Landsat TM Images , 1996 .

[10]  C. Bacour,et al.  Comparison of four radiative transfer models to simulate plant canopies reflectance: direct and inverse mode. , 2000 .

[11]  R. Myneni,et al.  Investigation of a model inversion technique to estimate canopy biophysical variables from spectral and directional reflectance data , 2000 .

[12]  M. Schlerf,et al.  Inversion of a forest reflectance model to estimate structural canopy variables from hyperspectral remote sensing data , 2006 .

[13]  F. M. Danson,et al.  Estimating the stem carbon production of a coniferous forest using an ecosystem simulation model driven by the remotely sensed red edge , 2000 .

[14]  Jason A. Cole,et al.  Hyperspectral Remote Sensing and Its Applications , 2005 .

[15]  F. Jay Breidt,et al.  Predicting Enhanced Vegetation Index (EVI) curves for ecosystem modeling applications , 2009 .

[16]  Paul J. Williams,et al.  Maize kernel hardness classification by near infrared (NIR) hyperspectral imaging and multivariate data analysis. , 2009, Analytica chimica acta.

[17]  John R. Miller,et al.  Hyperspectral vegetation indices and novel algorithms for predicting green LAI of crop canopies: Modeling and validation in the context of precision agriculture , 2004 .

[18]  F. Baret,et al.  Neural network estimation of LAI, fAPAR, fCover and LAI×Cab, from top of canopy MERIS reflectance data : Principles and validation , 2006 .

[19]  A. Strahler,et al.  Geometric-Optical Bidirectional Reflectance Modeling of a Conifer Forest Canopy , 1986, IEEE Transactions on Geoscience and Remote Sensing.

[20]  Babak Omidvar,et al.  Comparison of ANN and principal component analysis-multivariate linear regression models for predicting the river flow based on developed discrepancy ratio statistic , 2010, Expert Syst. Appl..

[21]  Chein-I Chang,et al.  Unsupervised hyperspectral image analysis with projection pursuit , 2000, IEEE Trans. Geosci. Remote. Sens..

[22]  Lênio Soares Galvão,et al.  Directional effects on NDVI and LAI retrievals from MODIS: A case study in Brazil with soybean , 2011, Int. J. Appl. Earth Obs. Geoinformation.

[23]  Li Kai The modeling of vegetation through leaf area index by means of remote sensing , 2005 .

[24]  H. Mooney,et al.  Modeling the Exchanges of Energy, Water, and Carbon Between Continents and the Atmosphere , 1997, Science.

[25]  Liu Huanjun Soybean LAI Estimation with in-situ Collected Hyperspectral Data Based on BP-Neural Networks , 2006 .

[26]  C. Justice,et al.  Development of vegetation and soil indices for MODIS-EOS , 1994 .

[27]  H. Ramon,et al.  Comparison among principal component, partial least squares and back propagation neural network analyses for accuracy of measurement of selected soil properties with visible and near infrared spectroscopy , 2010 .

[28]  Yuk L. Yung,et al.  On the use of principal component analysis to speed up radiative transfer calculations , 2010 .

[29]  Maosheng Zhao,et al.  A Continuous Satellite-Derived Measure of Global Terrestrial Primary Production , 2004 .

[30]  Ramakrishna R. Nemani,et al.  Measurement and remote sensing of LAI in Rocky Mountain montane ecosystems , 1997 .

[31]  F. Baret,et al.  PROSPECT: A model of leaf optical properties spectra , 1990 .

[32]  F. Baret,et al.  Validation of neural net techniques to estimate canopy biophysical variables from remote sensing data , 2002 .

[33]  James A. Smith,et al.  LAI inversion using a back-propagation neural network trained with a multiple scattering model , 1993, IEEE Trans. Geosci. Remote. Sens..

[34]  J. A. Schell,et al.  Monitoring vegetation systems in the great plains with ERTS , 1973 .

[35]  S. Liang,et al.  A hybrid inversion method for mapping leaf area index from MODIS data: experiments and application to broadleaf and needleleaf canopies , 2005 .

[36]  Olga Sykioti,et al.  Monitoring canopy biophysical and biochemical parameters in ecosystem scale using satellite hyperspectral imagery: An application on a Phlomis fruticosa Mediterranean ecosystem using multiangular CHRIS/PROBA observations , 2010 .

[37]  W. Verhoef Light scattering by leaf layers with application to canopy reflectance modeling: The Scattering by Arbitrarily Inclined Leaves (SAIL) model , 1984 .

[38]  Ning Wang,et al.  Detecting chilling injury in Red Delicious apple using hyperspectral imaging and neural networks , 2009 .

[39]  D. Diner,et al.  Estimation of vegetation canopy leaf area index and fraction of absorbed photosynthetically active radiation from atmosphere‐corrected MISR data , 1998 .

[40]  S. Prasher,et al.  Classification of hyperspectral data by decision trees and artificial neural networks to identify weed stress and nitrogen status of corn , 2003 .

[41]  W. Verhoef,et al.  Coupled soil–leaf-canopy and atmosphere radiative transfer modeling to simulate hyperspectral multi-angular surface reflectance and TOA radiance data , 2007 .

[42]  Marta Chiesi,et al.  Integration of multi‐source NDVI data for the estimation of Mediterranean forest productivity , 2006 .

[43]  A. Kuusk The Hot Spot Effect in Plant Canopy Reflectance , 1991 .

[44]  S. Ustin,et al.  Estimating leaf biochemistry using the PROSPECT leaf optical properties model , 1996 .

[45]  S. Liang,et al.  Retrieving leaf area index using a genetic algorithm with a canopy radiative transfer model , 2003 .

[46]  F. Baret,et al.  Optimal geometric configuration and algorithms for LAI indirect estimates under row canopies: The case of vineyards , 2009 .

[47]  Jingfeng Huang,et al.  Application of neural networks to discriminate fungal infection levels in rice panicles using hyperspectral reflectance and principal components analysis , 2010 .

[48]  R. Houborg,et al.  Combining vegetation index and model inversion methods for the extraction of key vegetation biophysical parameters using Terra and Aqua MODIS reflectance data , 2007 .

[49]  P. Gong,et al.  Wavelet transform applied to EO-1 hyperspectral data for forest LAI and crown closure mapping , 2004 .

[50]  D. Xie,et al.  LAI inversion algorithm based on directional reflectance kernels. , 2007, Journal of environmental management.

[51]  Hongliang Fang,et al.  Retrieving leaf area index with a neural network method: simulation and validation , 2003, IEEE Trans. Geosci. Remote. Sens..

[52]  A. Kuusk A Markov chain model of canopy reflectance , 1995 .

[53]  V. K. Dadhwal,et al.  Comparison of principal component inversion with VI-empirical approach for LAI estimation using simulated reflectance data , 2004 .

[54]  R. Colombo,et al.  Inversion of a radiative transfer model with hyperspectral observations for LAI mapping in poplar plantations , 2004 .

[55]  Y. Knyazikhin,et al.  Validation of Moderate Resolution Imaging Spectroradiometer leaf area index product in croplands of Alpilles, France , 2005 .

[56]  Thomas S. Pagano,et al.  Prelaunch characteristics of the Moderate Resolution Imaging Spectroradiometer (MODIS) on EOS-AM1 , 1998, IEEE Trans. Geosci. Remote. Sens..

[57]  Yunmei Li,et al.  Study on hyperspectral remote sensing estimation models about aboveground fresh biomass of rice , 2004, SPIE Optics + Photonics.

[58]  A. Skidmore,et al.  Inversion of a radiative transfer model for estimating vegetation LAI and chlorophyll in a heterogeneous grassland , 2008 .

[59]  A. Huete,et al.  Optical-Biophysical Relationships of Vegetation Spectra without Background Contamination , 2000 .

[60]  N. Gobron,et al.  Designing optimal spectral indices: A feasibility and proof of concept study , 1999 .

[61]  S. Running,et al.  Global products of vegetation leaf area and fraction absorbed PAR from year one of MODIS data , 2002 .

[62]  Jonas Ardö,et al.  Exploring the potential of MODIS EVI for modeling gross primary production across African ecosystems , 2011 .

[63]  Karin S. Fassnacht,et al.  Relationships between leaf area index and Landsat TM spectral vegetation indices across three temperate zone sites , 1999 .

[64]  M. Weiss,et al.  Reliability of the estimation of vegetation characteristics by inversion of three canopy reflectance models on airborne POLDER data , 2002 .

[65]  Alfonso Calera,et al.  Multisensor comparison of NDVI for a semi‐arid environment in Spain , 2009 .

[66]  E. Ben-Dora,et al.  Quantitative mapping of the soil rubification process on sand dunes using an airborne hyperspectral sensor , 2006 .

[67]  Martha C. Anderson,et al.  A comparison of empirical and neural network approaches for estimating corn and soybean leaf area index from Landsat ETM+ imagery ☆ , 2004 .

[68]  A. Bondeau,et al.  Comparing global models of terrestrial net primary productivity (NPP): overview and key results , 1999 .

[69]  K. Soudani,et al.  Calibration and validation of hyperspectral indices for the estimation of broadleaved forest leaf chlorophyll content, leaf mass per area, leaf area index and leaf canopy biomass , 2008 .

[70]  F. M. Danson,et al.  Extraction of vegetation biophysical parameters by inversion of the PROSPECT + SAIL models on sugar beet canopy reflectance data. Application to TM and AVIRIS sensors , 1995 .

[71]  A. Huete,et al.  Overview of the radiometric and biophysical performance of the MODIS vegetation indices , 2002 .

[72]  Roohollah Noori,et al.  Evaluation of PCA and Gamma test techniques on ANN operation for weekly solid waste prediction. , 2010, Journal of environmental management.

[73]  S. Leblanc,et al.  Derivation and validation of Canada-wide coarse-resolution leaf area index maps using high-resolution satellite imagery and ground measurements , 2002 .

[74]  Clement Atzberger,et al.  Comparative analysis of three chemometric techniques for the spectroradiometric assessment of canopy chlorophyll content in winter wheat , 2010 .