Computational resources for cryo-electron tomography in Bsoft.

[1]  Giovanni Cardone,et al.  Visualization of the herpes simplex virus portal in situ by cryo-electron tomography. , 2007, Virology.

[2]  Xiao-Ping Xu,et al.  Efficient automatic noise reduction of electron tomographic reconstructions based on iterative median filtering. , 2007, Journal of structural biology.

[3]  Salvatore Lanzavecchia,et al.  Local refinement: an attempt to correct for shrinkage and distortion in electron tomography. , 2007, Journal of structural biology.

[4]  J Bernard Heymann,et al.  Bsoft: image processing and molecular modeling for electron microscopy. , 2007, Journal of structural biology.

[5]  Giovanni Cardone,et al.  Influenza virus pleiomorphy characterized by cryoelectron tomography , 2006, Proceedings of the National Academy of Sciences.

[6]  Dennis C Winkler,et al.  Visualizing the Clathrin and Assembly-Regulating Proteins of Coated Vesicles by Cryo-Electron Tomography , 2006, Microscopy and Microanalysis.

[7]  Achilleas S Frangakis,et al.  Tilt-series and electron microscope alignment for the correction of the non-perpendicularity of beam and tilt-axis. , 2006, Journal of structural biology.

[8]  Mark H Ellisman,et al.  Transform-based backprojection for volume reconstruction of large format electron microscope tilt series. , 2006, Journal of structural biology.

[9]  S S Brandt,et al.  Automatic TEM image alignment by trifocal geometry , 2006, Journal of microscopy.

[10]  David N Mastronarde,et al.  Automated electron microscope tomography using robust prediction of specimen movements. , 2005, Journal of structural biology.

[11]  Giovanni Cardone,et al.  A resolution criterion for electron tomography based on cross-validation. , 2005, Journal of structural biology.

[12]  Mónica Chagoyen,et al.  Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology. , 2005, Journal of structural biology.

[13]  Masakazu Kikuchi,et al.  Electron tomography reveals diverse conformations of integrin αIIbβ3 in the active state , 2005 .

[14]  Friedrich Förster,et al.  TOM software toolbox: acquisition and analysis for electron tomography. , 2005, Journal of structural biology.

[15]  K. Sekiguchi,et al.  Electron tomography reveals diverse conformations of integrin alphaIIbbeta3 in the active state. , 2005, Journal of structural biology.

[16]  S. Subramaniam,et al.  Three-dimensional electron microscopy at molecular resolution. , 2004, Annual review of biophysics and biomolecular structure.

[17]  Pawel A Penczek,et al.  Gridding-based direct Fourier inversion of the three-dimensional ray transform. , 2004, Journal of the Optical Society of America. A, Optics, image science, and vision.

[18]  Wolfgang Baumeister,et al.  Three-Dimensional Structure of Herpes Simplex Virus from Cryo-Electron Tomography , 2003, Science.

[19]  José Jesús Fernández,et al.  An improved algorithm for anisotropic nonlinear diffusion for denoising cryo-tomograms. , 2003, Journal of structural biology.

[20]  David N Mastronarde,et al.  A fast reconstruction algorithm for electron microscope tomography. , 2003, Journal of structural biology.

[21]  M. Baker,et al.  Applications of a bilateral denoising filter in biological electron microscopy. , 2003, Journal of structural biology.

[22]  F. Förster,et al.  Identification of macromolecular complexes in cryoelectron tomograms of phantom cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[23]  A S Frangakis,et al.  Noise reduction in electron tomographic reconstructions using nonlinear anisotropic diffusion. , 2001, Journal of structural biology.

[24]  Heymann Jb,et al.  Bsoft: Image and Molecular Processing in Electron Microscopy , 2001 .

[25]  J B Heymann,et al.  Bsoft: image and molecular processing in electron microscopy. , 2001, Journal of structural biology.

[26]  W. Baumeister,et al.  Macromolecular electron microscopy in the era of structural genomics. , 2000, Trends in biochemical sciences.

[27]  M. Glas,et al.  Principles of Computerized Tomographic Imaging , 2000 .

[28]  W Chiu,et al.  EMAN: semiautomated software for high-resolution single-particle reconstructions. , 1999, Journal of structural biology.

[29]  U Aebi,et al.  Determination of the inelastic mean free path of electrons in vitrified ice layers for on‐line thickness measurements by zero‐loss imaging , 1999, Journal of microscopy.

[30]  D Ress,et al.  Automatic acquisition of fiducial markers and alignment of images in tilt series for electron tomography. , 1999, Journal of electron microscopy.

[31]  J M Carazo,et al.  3D reconstruction in electron microscopy using ART with smooth spherically symmetric volume elements (blobs). , 1998, Ultramicroscopy.

[32]  B. Trus,et al.  The herpes simplex virus procapsid: structure, conformational changes upon maturation, and roles of the triplex proteins VP19c and VP23 in assembly. , 1996, Journal of molecular biology.

[33]  J R Kremer,et al.  Computer visualization of three-dimensional image data using IMOD. , 1996, Journal of structural biology.

[34]  J Frank,et al.  Three-dimensional reconstruction of single particles embedded in ice. , 1992, Ultramicroscopy.

[35]  J Frank,et al.  A NEW 3‐D RECONSTRUCTION SCHEME APPLIED TO THE 50S RIBOSOMAL SUBUNIT OF E. COLI , 1986, Journal of microscopy.

[36]  J Frank,et al.  Averaging of low exposure electron micrographs of non-periodic objects. , 1975, Ultramicroscopy.